RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 A0A1W2PRG6 482 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 TRAFD1O14545 582 aaPredicted RBP8.04□□□□□ -1.12
SMG1-202ENST00000446231 GUCY1B2O75343 617 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 ZNF37AP17032 561 aaPredicted RBP8.04□□□□□ -1.12
SMG1-202ENST00000446231 MUTP22033 750 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 C12orf56Q8IXR9 622 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 ZSWIM2Q8NEG5 633 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 CYP4F12Q9HCS2 524 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 SNTNA6NMZ2 147 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 HDAC3O15379 428 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 FAM86B2P0C5J1 330 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 RALGDSQ12967 914 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 LRRC20Q8TCA0 184 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 PCDHB18PQ96TA0 734 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 MADDQ8WXG6 1647 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 CITO14578 2027 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 MAGEB16A2A368 324 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 TPP1O14773 563 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 CASP7P55210 303 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 KLF10Q13118 480 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 BNIPLQ7Z465 357 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 PORP16435 677 aaPredicted RBP8.04□□□□□ -1.12
SMG1-202ENST00000446231 EPS8L1Q8TE68 723 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 PIF1Q9H611 641 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 ATG7O95352 703 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 SLC26A3P40879 764 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 TPTEP56180 551 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 TLR1Q15399 786 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 DDR2Q16832 855 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 MOXD1Q6UVY6 613 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 DHX33Q9H6R0 707 aaKnown RBP8.04□□□□□ -1.12
SMG1-202ENST00000446231 KIF1BO60333 1816 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 KBTBD13C9JR72 458 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 CCNE2O96020 404 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 SWSAP1Q6NVH7 229 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 NEK5Q6P3R8 708 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 HERC6Q8IVU3 1022 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 CENPNQ96H22 339 aaPredicted RBP8.04□□□□□ -1.12
SMG1-202ENST00000446231 SERAC1Q96JX3 654 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 ADAM28Q9UKQ2 775 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 ATP6V1E1P36543 226 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 SLC7A2P52569 658 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 EFNA5P52803 228 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 ANGEL2Q5VTE6 544 aaKnown RBP8.04□□□□□ -1.12
SMG1-202ENST00000446231 PANX3Q96QZ0 392 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 NUAK2Q9H093 628 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.04□□□□□ -1.12
SMG1-202ENST00000446231 ANKRD33BA6NCL7 494 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 E7ENX8 843 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 WDR72Q3MJ13 1102 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 ARHGAP17Q68EM7 881 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 ADGRD1Q6QNK2 874 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 SHCBP1Q8NEM2 672 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 IPMKQ8NFU5 416 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 MMP19Q99542 508 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 ADI1Q9BV57 179 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 AXIN2Q9Y2T1 843 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 IMPG1Q17R60 797 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 DPY19L2Q6NUT2 758 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 KAT5Q92993 513 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 MARK4Q96L34 752 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 RMDN3Q96TC7 470 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 LOC102724428A0A0B4J2F2 783 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 M0QX08 132 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 SEPHS1P49903 392 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 SIK1P57059 783 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 ILF2Q12905 390 aaKnown RBP8.03□□□□□ -1.12
SMG1-202ENST00000446231 ZC3H12BQ5HYM0 836 aaKnown RBP8.03□□□□□ -1.12
SMG1-202ENST00000446231 NRG4Q8WWG1 115 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 KLHL32Q96NJ5 620 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 NPAS2Q99743 824 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 MMTAG2Q9BU76 263 aaKnown RBP8.03□□□□□ -1.12
SMG1-202ENST00000446231 EHD3Q9NZN3 535 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 POMPQ9Y244 141 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 F8VP50 259 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 DBTP11182 482 aaKnown RBP8.03□□□□□ -1.12
SMG1-202ENST00000446231 PHKA2P46019 1235 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 MARSP56192 900 aaKnown RBP8.03□□□□□ -1.12
SMG1-202ENST00000446231 HDDC2Q7Z4H3 204 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 EPB41L1Q9H4G0 881 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 COPG1Q9Y678 874 aaKnown RBP8.03□□□□□ -1.12
SMG1-202ENST00000446231 TNFAIP2Q03169 654 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 SLC22A9Q8IVM8 553 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 RDM1Q8NG50 284 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 TRPV5Q9NQA5 729 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 CCNL1Q9UK58 526 aaPredicted RBP8.03□□□□□ -1.12
SMG1-202ENST00000446231 COG5Q9UP83 839 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 FAM20BO75063 409 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 FBXO21O94952 628 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 PPIL2Q13356 520 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 CCDC149Q6ZUS6 474 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 BMP10O95393 424 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 KRT20P35900 424 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 ADGRA1Q86SQ6 560 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 ACTRT2Q8TDY3 377 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 RNF145Q96MT1 663 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 MECRQ9BV79 373 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 ZNF556Q9HAH1 456 aa8.03□□□□□ -1.12
SMG1-202ENST00000446231 JPH1Q9HDC5 661 aaPredicted RBP8.03□□□□□ -1.12
SMG1-202ENST00000446231 CD320Q9NPF0 282 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms