RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 ZNF366Q8N895 744 aa19.41■□□□□ 0.7
HDAC4-203ENST00000445704 ZNF557Q8N988 423 aaPredicted RBP19.41■□□□□ 0.7
HDAC4-203ENST00000445704 LOXL4Q96JB6 756 aa19.41■□□□□ 0.7
HDAC4-203ENST00000445704 MRGPRX1Q96LB2 322 aa19.41■□□□□ 0.7
HDAC4-203ENST00000445704 TKTL2Q9H0I9 626 aa19.41■□□□□ 0.7
HDAC4-203ENST00000445704 RAB6CQ9H0N0 254 aa19.41■□□□□ 0.7
HDAC4-203ENST00000445704 MYO6Q9UM54 1294 aa19.41■□□□□ 0.7
HDAC4-203ENST00000445704 USP18Q9UMW8 372 aa19.41■□□□□ 0.7
HDAC4-203ENST00000445704 SNX10Q9Y5X0 201 aa19.41■□□□□ 0.7
HDAC4-203ENST00000445704 PLXND1Q9Y4D7 1925 aa19.41■□□□□ 0.7
HDAC4-203ENST00000445704 CKAP5Q14008 2032 aa19.41■□□□□ 0.7
HDAC4-203ENST00000445704 FRYLO94915 3013 aa19.4■□□□□ 0.7
HDAC4-203ENST00000445704 H0Y626 953 aa19.4■□□□□ 0.7
HDAC4-203ENST00000445704 GSCP56915 257 aaPredicted RBP19.4■□□□□ 0.7
HDAC4-203ENST00000445704 TPM4P67936 248 aa19.4■□□□□ 0.7
HDAC4-203ENST00000445704 STARD3Q14849 445 aa19.4■□□□□ 0.7
HDAC4-203ENST00000445704 ELF2Q15723 593 aa19.4■□□□□ 0.7
HDAC4-203ENST00000445704 CCDC6Q16204 474 aa19.4■□□□□ 0.7
HDAC4-203ENST00000445704 FNDC3BQ53EP0 1204 aaKnown RBP19.4■□□□□ 0.7
HDAC4-203ENST00000445704 PITRM1Q5JRX3 1037 aa19.4■□□□□ 0.7
HDAC4-203ENST00000445704 BRMS1LQ5PSV4 323 aa19.4■□□□□ 0.7
HDAC4-203ENST00000445704 MON1BQ7L1V2 547 aa19.4■□□□□ 0.7
HDAC4-203ENST00000445704 CCAR2Q8N163 923 aaKnown RBP19.4■□□□□ 0.7
HDAC4-203ENST00000445704 TTC17Q96AE7 1141 aa19.4■□□□□ 0.7
HDAC4-203ENST00000445704 RPRD1AQ96P16 312 aaPredicted RBP19.4■□□□□ 0.7
HDAC4-203ENST00000445704 MKRN2Q9H000 416 aaKnown RBP19.4■□□□□ 0.7
HDAC4-203ENST00000445704 ARRDC1-AS1Q9H2J1 176 aa19.4■□□□□ 0.7
HDAC4-203ENST00000445704 TMEM245Q9H330 911 aa19.4■□□□□ 0.7
HDAC4-203ENST00000445704 WDCPQ9H6R7 721 aa19.4■□□□□ 0.7
HDAC4-203ENST00000445704 SEMA4GQ9NTN9 838 aa19.4■□□□□ 0.7
HDAC4-203ENST00000445704 ADAM22Q9P0K1 906 aa19.4■□□□□ 0.7
HDAC4-203ENST00000445704 VANGL2Q9ULK5 521 aa19.4■□□□□ 0.7
HDAC4-203ENST00000445704 CFAP54Q96N23 3096 aa19.4■□□□□ 0.7
HDAC4-203ENST00000445704 RHOBTB1O94844 696 aa19.39■□□□□ 0.69
HDAC4-203ENST00000445704 CAVIN2O95810 425 aa19.39■□□□□ 0.69
HDAC4-203ENST00000445704 F9P00740 461 aa19.39■□□□□ 0.69
HDAC4-203ENST00000445704 EPHX1P07099 455 aa19.39■□□□□ 0.69
HDAC4-203ENST00000445704 DLDP09622 509 aaKnown RBP19.39■□□□□ 0.69
HDAC4-203ENST00000445704 POLR2EP19388 210 aaKnown RBP19.39■□□□□ 0.69
HDAC4-203ENST00000445704 PBX1P40424 430 aa19.39■□□□□ 0.69
HDAC4-203ENST00000445704 CSKP41240 450 aa19.39■□□□□ 0.69
HDAC4-203ENST00000445704 COPAP53621 1224 aa19.39■□□□□ 0.69
HDAC4-203ENST00000445704 ATP11AP98196 1134 aa19.39■□□□□ 0.69
HDAC4-203ENST00000445704 C15orf59Q2T9L4 293 aaPredicted RBP19.39■□□□□ 0.69
HDAC4-203ENST00000445704 RABGAP1LQ5R372 815 aa19.39■□□□□ 0.69
HDAC4-203ENST00000445704 APCDD1Q8J025 514 aa19.39■□□□□ 0.69
HDAC4-203ENST00000445704 RXFP2Q8WXD0 754 aa19.39■□□□□ 0.69
HDAC4-203ENST00000445704 MYO19Q96H55 970 aa19.39■□□□□ 0.69
HDAC4-203ENST00000445704 SPACA7Q96KW9 195 aa19.39■□□□□ 0.69
HDAC4-203ENST00000445704 SIK2Q9H0K1 926 aa19.39■□□□□ 0.69
HDAC4-203ENST00000445704 TAS2R14Q9NYV8 317 aa19.39■□□□□ 0.69
HDAC4-203ENST00000445704 A0A1B0GVM2 712 aa19.38■□□□□ 0.69
HDAC4-203ENST00000445704 TCRBV5S1A1TA0A578 114 aa19.38■□□□□ 0.69
HDAC4-203ENST00000445704 TCAF2A6NFQ2 919 aa19.38■□□□□ 0.69
HDAC4-203ENST00000445704 C2CD4BA6NLJ0 364 aa19.38■□□□□ 0.69
HDAC4-203ENST00000445704 GOLGA6L19H0YKK7 550 aa19.38■□□□□ 0.69
HDAC4-203ENST00000445704 LRP3O75074 770 aa19.38■□□□□ 0.69
HDAC4-203ENST00000445704 CCDC172P0C7W6 258 aa19.38■□□□□ 0.69
HDAC4-203ENST00000445704 RDXP35241 583 aaKnown RBP19.38■□□□□ 0.69
HDAC4-203ENST00000445704 CTSOP43234 321 aaPredicted RBP19.38■□□□□ 0.69
HDAC4-203ENST00000445704 NUMBP49757 651 aa19.38■□□□□ 0.69
HDAC4-203ENST00000445704 MTA1Q13330 715 aa19.38■□□□□ 0.69
HDAC4-203ENST00000445704 E2F5Q15329 346 aa19.38■□□□□ 0.69
HDAC4-203ENST00000445704 ASIC2Q16515 512 aa19.38■□□□□ 0.69
HDAC4-203ENST00000445704 CCDC14Q49A88 953 aa19.38■□□□□ 0.69
HDAC4-203ENST00000445704 C5orf22Q49AR2 442 aa19.38■□□□□ 0.69
HDAC4-203ENST00000445704 ARTNQ5T4W7 220 aa19.38■□□□□ 0.69
HDAC4-203ENST00000445704 SH3PXD2AQ5TCZ1 1133 aa19.38■□□□□ 0.69
HDAC4-203ENST00000445704 TTC39BQ5VTQ0 682 aaPredicted RBP19.38■□□□□ 0.69
HDAC4-203ENST00000445704 CXorf57Q6NSI4 855 aaKnown RBP19.38■□□□□ 0.69
HDAC4-203ENST00000445704 KIAA1324Q6UXG2 1013 aaKnown RBP19.38■□□□□ 0.69
HDAC4-203ENST00000445704 SND1Q7KZF4 910 aaKnown RBP eCLIP19.38■□□□□ 0.69
HDAC4-203ENST00000445704 C11orf74Q86VG3 221 aa19.38■□□□□ 0.69
HDAC4-203ENST00000445704 FAM131BQ86XD5 332 aa19.38■□□□□ 0.69
HDAC4-203ENST00000445704 CCDC117Q8IWD4 279 aaPredicted RBP19.38■□□□□ 0.69
HDAC4-203ENST00000445704 ZNF683Q8IZ20 524 aa19.38■□□□□ 0.69
HDAC4-203ENST00000445704 ABCA7Q8IZY2 2146 aa19.38■□□□□ 0.69
HDAC4-203ENST00000445704 GPR161Q8N6U8 529 aaKnown RBP19.38■□□□□ 0.69
HDAC4-203ENST00000445704 OR52K2Q8NGK3 314 aa19.38■□□□□ 0.69
HDAC4-203ENST00000445704 MRGPRX3Q96LB0 322 aa19.38■□□□□ 0.69
HDAC4-203ENST00000445704 SMOC1Q9H4F8 434 aa19.38■□□□□ 0.69
HDAC4-203ENST00000445704 KIAA1522Q9P206 1035 aaPredicted RBP19.38■□□□□ 0.69
HDAC4-203ENST00000445704 PLA2G4CQ9UP65 541 aa19.38■□□□□ 0.69
HDAC4-203ENST00000445704 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.38■□□□□ 0.69
HDAC4-203ENST00000445704 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.37■□□□□ 0.69
HDAC4-203ENST00000445704 IGHV1OR15-9A0A0B4J2B8 117 aa19.37■□□□□ 0.69
HDAC4-203ENST00000445704 SYNCRIPO60506 623 aaKnown RBP19.37■□□□□ 0.69
HDAC4-203ENST00000445704 ENDOD1O94919 500 aa19.37■□□□□ 0.69
HDAC4-203ENST00000445704 CALB1P05937 261 aa19.37■□□□□ 0.69
HDAC4-203ENST00000445704 ATP5BP06576 529 aaKnown RBP19.37■□□□□ 0.69
HDAC4-203ENST00000445704 PDGFRAP16234 1089 aa19.37■□□□□ 0.69
HDAC4-203ENST00000445704 MZF1P28698 734 aaPredicted RBP19.37■□□□□ 0.69
HDAC4-203ENST00000445704 RFC1P35251 1148 aaPredicted RBP19.37■□□□□ 0.69
HDAC4-203ENST00000445704 MPLP40238 635 aa19.37■□□□□ 0.69
HDAC4-203ENST00000445704 UBASH3AP57075 661 aa19.37■□□□□ 0.69
HDAC4-203ENST00000445704 C1QBPQ07021 282 aaKnown RBP19.37■□□□□ 0.69
HDAC4-203ENST00000445704 CAMK2GQ13555 558 aaPredicted RBP19.37■□□□□ 0.69
HDAC4-203ENST00000445704 CSRP2Q16527 193 aa19.37■□□□□ 0.69
HDAC4-203ENST00000445704 CDO1Q16878 200 aa19.37■□□□□ 0.69
HDAC4-203ENST00000445704 PLEKHG6Q3KR16 790 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms