RNA–Protein interactions for RNA: ENST00000445658.6

ERBB2-203, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2 BASIC

Gene ERBB2, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-203ENST00000445658 ATG16L1Q676U5 607 aa12.84□□□□□ -0.35
ERBB2-203ENST00000445658 ST13P4Q8IZP2 240 aaPredicted RBP12.84□□□□□ -0.35
ERBB2-203ENST00000445658 SNX25Q9H3E2 840 aa12.84□□□□□ -0.35
ERBB2-203ENST00000445658 TLE6Q9H808 572 aa12.84□□□□□ -0.35
ERBB2-203ENST00000445658 ARHGEF4Q9NR80 690 aa12.84□□□□□ -0.35
ERBB2-203ENST00000445658 PNPOQ9NVS9 261 aa12.84□□□□□ -0.35
ERBB2-203ENST00000445658 SEPT10Q9P0V9 454 aa12.84□□□□□ -0.35
ERBB2-203ENST00000445658 CAPN8A6NHC0 703 aa12.84□□□□□ -0.35
ERBB2-203ENST00000445658 CLDN5O00501 218 aa12.84□□□□□ -0.35
ERBB2-203ENST00000445658 AIM2O14862 343 aa12.84□□□□□ -0.35
ERBB2-203ENST00000445658 STAU1O95793 577 aaKnown RBP12.84□□□□□ -0.35
ERBB2-203ENST00000445658 CSH1P0DML2 217 aa12.84□□□□□ -0.35
ERBB2-203ENST00000445658 CSH2P0DML3 217 aa12.84□□□□□ -0.35
ERBB2-203ENST00000445658 EIF4BP23588 611 aaKnown RBP12.84□□□□□ -0.35
ERBB2-203ENST00000445658 LMO2P25791 158 aa12.84□□□□□ -0.35
ERBB2-203ENST00000445658 ATICP31939 592 aa12.84□□□□□ -0.35
ERBB2-203ENST00000445658 SDCCAG8Q86SQ7 713 aaPredicted RBP12.84□□□□□ -0.35
ERBB2-203ENST00000445658 ADAM32Q8TC27 787 aa12.84□□□□□ -0.35
ERBB2-203ENST00000445658 GDPD5Q8WTR4 605 aa12.84□□□□□ -0.35
ERBB2-203ENST00000445658 SLC44A1Q8WWI5 657 aa12.84□□□□□ -0.35
ERBB2-203ENST00000445658 DHX35Q9H5Z1 703 aaKnown RBP12.84□□□□□ -0.35
ERBB2-203ENST00000445658 STRIP2Q9ULQ0 834 aa12.84□□□□□ -0.35
ERBB2-203ENST00000445658 USP18Q9UMW8 372 aa12.84□□□□□ -0.35
ERBB2-203ENST00000445658 APOBEC2Q9Y235 224 aaKnown RBP12.84□□□□□ -0.35
ERBB2-203ENST00000445658 DCXO43602 365 aa12.83□□□□□ -0.36
ERBB2-203ENST00000445658 HNRNPCL1O60812 293 aaKnown RBP12.83□□□□□ -0.36
ERBB2-203ENST00000445658 ITGBL1O95965 494 aaPredicted RBP12.83□□□□□ -0.36
ERBB2-203ENST00000445658 IGFBP6P24592 240 aaPredicted RBP12.83□□□□□ -0.36
ERBB2-203ENST00000445658 ETV4P43268 484 aa12.83□□□□□ -0.36
ERBB2-203ENST00000445658 PGGT1BP53609 377 aa12.83□□□□□ -0.36
ERBB2-203ENST00000445658 NME3Q13232 169 aa12.83□□□□□ -0.36
ERBB2-203ENST00000445658 MFSD10Q14728 455 aa12.83□□□□□ -0.36
ERBB2-203ENST00000445658 TTC39BQ5VTQ0 682 aaPredicted RBP12.83□□□□□ -0.36
ERBB2-203ENST00000445658 NT5DC4Q86YG4 428 aa12.83□□□□□ -0.36
ERBB2-203ENST00000445658 CENPKQ9BS16 269 aa12.83□□□□□ -0.36
ERBB2-203ENST00000445658 UNKQ9C0B0 810 aaKnown RBP12.83□□□□□ -0.36
ERBB2-203ENST00000445658 SMYD2Q9NRG4 433 aa12.83□□□□□ -0.36
ERBB2-203ENST00000445658 ZNF358Q9NW07 568 aa12.83□□□□□ -0.36
ERBB2-203ENST00000445658 DDX56Q9NY93 547 aaKnown RBP12.83□□□□□ -0.36
ERBB2-203ENST00000445658 TTLL3Q9Y4R7 772 aa12.83□□□□□ -0.36
ERBB2-203ENST00000445658 HTTP42858 3142 aa12.83□□□□□ -0.36
ERBB2-203ENST00000445658 IGHA2P01877 340 aa12.83□□□□□ -0.36
ERBB2-203ENST00000445658 KRT7P08729 469 aa12.83□□□□□ -0.36
ERBB2-203ENST00000445658 GSTA2P09210 222 aa12.83□□□□□ -0.36
ERBB2-203ENST00000445658 RAG1P15918 1043 aa12.83□□□□□ -0.36
ERBB2-203ENST00000445658 MPP3Q13368 585 aa12.83□□□□□ -0.36
ERBB2-203ENST00000445658 LIN52Q52LA3 116 aa12.83□□□□□ -0.36
ERBB2-203ENST00000445658 FASTKD1Q53R41 847 aaKnown RBP12.83□□□□□ -0.36
ERBB2-203ENST00000445658 PPM1JQ5JR12 505 aa12.83□□□□□ -0.36
ERBB2-203ENST00000445658 SPATA24Q86W54 205 aa12.83□□□□□ -0.36
ERBB2-203ENST00000445658 TNS4Q8IZW8 715 aa12.83□□□□□ -0.36
ERBB2-203ENST00000445658 MZB1Q8WU39 189 aa12.83□□□□□ -0.36
ERBB2-203ENST00000445658 ZIC5Q96T25 663 aa12.83□□□□□ -0.36
ERBB2-203ENST00000445658 LHX5Q9H2C1 402 aa12.83□□□□□ -0.36
ERBB2-203ENST00000445658 PDP2Q9P2J9 529 aa12.83□□□□□ -0.36
ERBB2-203ENST00000445658 GNEQ9Y223 722 aaKnown RBP12.83□□□□□ -0.36
ERBB2-203ENST00000445658 RRN3P2A6NIE6 340 aa12.83□□□□□ -0.36
ERBB2-203ENST00000445658 PEX1O43933 1283 aa12.83□□□□□ -0.36
ERBB2-203ENST00000445658 TM7SF2O76062 418 aa12.83□□□□□ -0.36
ERBB2-203ENST00000445658 HMGCRP04035 888 aa12.83□□□□□ -0.36
ERBB2-203ENST00000445658 BCAR1P56945 870 aa12.83□□□□□ -0.36
ERBB2-203ENST00000445658 LGSNQ5TDP6 509 aa12.83□□□□□ -0.36
ERBB2-203ENST00000445658 PMF1Q6P1K2 205 aa12.83□□□□□ -0.36
ERBB2-203ENST00000445658 FAM183BPQ6ZVS7 135 aa12.83□□□□□ -0.36
ERBB2-203ENST00000445658 PTAR1Q7Z6K3 402 aaPredicted RBP12.83□□□□□ -0.36
ERBB2-203ENST00000445658 WDR75Q8IWA0 830 aaKnown RBP12.83□□□□□ -0.36
ERBB2-203ENST00000445658 BEST2Q8NFU1 509 aa12.83□□□□□ -0.36
ERBB2-203ENST00000445658 OR6Y1Q8NGX8 325 aa12.83□□□□□ -0.36
ERBB2-203ENST00000445658 CEP70Q8NHQ1 597 aa12.83□□□□□ -0.36
ERBB2-203ENST00000445658 SNRNP27Q8WVK2 155 aaKnown RBP12.83□□□□□ -0.36
ERBB2-203ENST00000445658 MPP4Q96JB8 637 aa12.83□□□□□ -0.36
ERBB2-203ENST00000445658 CNBD2Q96M20 576 aa12.83□□□□□ -0.36
ERBB2-203ENST00000445658 XAB2Q9HCS7 855 aaKnown RBP12.83□□□□□ -0.36
ERBB2-203ENST00000445658 PLLPQ9Y342 182 aa12.83□□□□□ -0.36
ERBB2-203ENST00000445658 SCN1AP35498 2009 aa12.82□□□□□ -0.36
ERBB2-203ENST00000445658 CASTOR2A6NHX0 329 aa12.82□□□□□ -0.36
ERBB2-203ENST00000445658 HNRNPRO43390 633 aaKnown RBP12.82□□□□□ -0.36
ERBB2-203ENST00000445658 MRPS5P82675 430 aaKnown RBP12.82□□□□□ -0.36
ERBB2-203ENST00000445658 CDC42EP1Q00587 391 aa12.82□□□□□ -0.36
ERBB2-203ENST00000445658 EFHC1Q5JVL4 640 aa12.82□□□□□ -0.36
ERBB2-203ENST00000445658 NOTUMQ6P988 496 aa12.82□□□□□ -0.36
ERBB2-203ENST00000445658 FAM131BQ86XD5 332 aa12.82□□□□□ -0.36
ERBB2-203ENST00000445658 HIC2Q96JB3 615 aa12.82□□□□□ -0.36
ERBB2-203ENST00000445658 ARHGAP39Q9C0H5 1083 aa12.82□□□□□ -0.36
ERBB2-203ENST00000445658 ADAMTS10Q9H324 1103 aa12.82□□□□□ -0.36
ERBB2-203ENST00000445658 DNAAF2Q9NVR5 837 aaKnown RBP12.82□□□□□ -0.36
ERBB2-203ENST00000445658 ADAMTS6Q9UKP5 1117 aa12.82□□□□□ -0.36
ERBB2-203ENST00000445658 PLA2G4CQ9UP65 541 aa12.82□□□□□ -0.36
ERBB2-203ENST00000445658 PFDN1O60925 122 aa12.82□□□□□ -0.36
ERBB2-203ENST00000445658 CA8P35219 290 aa12.82□□□□□ -0.36
ERBB2-203ENST00000445658 SERPINB5P36952 375 aa12.82□□□□□ -0.36
ERBB2-203ENST00000445658 TAP1Q03518 808 aa12.82□□□□□ -0.36
ERBB2-203ENST00000445658 ACAP1Q15027 740 aa12.82□□□□□ -0.36
ERBB2-203ENST00000445658 PCBP1Q15365 356 aaKnown RBP eCLIP12.82□□□□□ -0.362e-7■■□□□ 11.8
ERBB2-203ENST00000445658 TRMT5Q32P41 509 aaKnown RBP12.82□□□□□ -0.36
ERBB2-203ENST00000445658 CST9Q5W186 159 aa12.82□□□□□ -0.36
ERBB2-203ENST00000445658 ZNF398Q8TD17 642 aa12.82□□□□□ -0.36
ERBB2-203ENST00000445658 USP13Q92995 863 aaPredicted RBP12.82□□□□□ -0.36
ERBB2-203ENST00000445658 SPATA16Q9BXB7 569 aa12.82□□□□□ -0.36
ERBB2-203ENST00000445658 BARX2Q9UMQ3 279 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms