RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 KIAA1522Q9P206 1035 aaPredicted RBP12.2□□□□□ -0.46
TTC28-203ENST00000442232 CNTN6Q9UQ52 1028 aa12.2□□□□□ -0.46
TTC28-203ENST00000442232 APOBEC2Q9Y235 224 aaKnown RBP12.2□□□□□ -0.46
TTC28-203ENST00000442232 NUMA1Q14980 2115 aa12.2□□□□□ -0.46
TTC28-203ENST00000442232 EDDM13A0A1B0GTR0 161 aa12.19□□□□□ -0.46
TTC28-203ENST00000442232 GABBR2O75899 941 aa12.19□□□□□ -0.46
TTC28-203ENST00000442232 FSBPO95073 299 aa12.19□□□□□ -0.46
TTC28-203ENST00000442232 LUC7L3O95232 432 aaKnown RBP12.19□□□□□ -0.46
TTC28-203ENST00000442232 TOP3BO95985 862 aaKnown RBP12.19□□□□□ -0.46
TTC28-203ENST00000442232 SRPRAP08240 638 aaKnown RBP12.19□□□□□ -0.46
TTC28-203ENST00000442232 ZNF883P0CG24 379 aa12.19□□□□□ -0.46
TTC28-203ENST00000442232 ABCB4P21439 1286 aa12.19□□□□□ -0.46
TTC28-203ENST00000442232 ACSL1P33121 698 aa12.19□□□□□ -0.46
TTC28-203ENST00000442232 RPL34P49207 117 aaKnown RBP12.19□□□□□ -0.46
TTC28-203ENST00000442232 UBE2HP62256 183 aa12.19□□□□□ -0.46
TTC28-203ENST00000442232 RPS24P62847 133 aaKnown RBP12.19□□□□□ -0.46
TTC28-203ENST00000442232 YWHAZP63104 245 aaKnown RBP12.19□□□□□ -0.46
TTC28-203ENST00000442232 CDK17Q00537 523 aa12.19□□□□□ -0.46
TTC28-203ENST00000442232 PDCLQ13371 301 aa12.19□□□□□ -0.46
TTC28-203ENST00000442232 SUZ12Q15022 739 aaKnown RBP12.19□□□□□ -0.46
TTC28-203ENST00000442232 PTPRNQ16849 979 aa12.19□□□□□ -0.46
TTC28-203ENST00000442232 EXOC3L4Q17RC7 722 aa12.19□□□□□ -0.46
TTC28-203ENST00000442232 HNRNPA1L2Q32P51 320 aaKnown RBP12.19□□□□□ -0.46
TTC28-203ENST00000442232 DCAF6Q58WW2 860 aa12.19□□□□□ -0.46
TTC28-203ENST00000442232 PITRM1Q5JRX3 1037 aa12.19□□□□□ -0.46
TTC28-203ENST00000442232 RABGAP1LQ5R372 815 aa12.19□□□□□ -0.46
TTC28-203ENST00000442232 TTC39BQ5VTQ0 682 aaPredicted RBP12.19□□□□□ -0.46
TTC28-203ENST00000442232 TRIM65Q6PJ69 517 aa12.19□□□□□ -0.46
TTC28-203ENST00000442232 FAM114A1Q8IWE2 563 aa12.19□□□□□ -0.46
TTC28-203ENST00000442232 CFAP52Q8N1V2 620 aa12.19□□□□□ -0.46
TTC28-203ENST00000442232 KDM1BQ8NB78 822 aa12.19□□□□□ -0.46
TTC28-203ENST00000442232 ZNF606Q8WXB4 792 aa12.19□□□□□ -0.46
TTC28-203ENST00000442232 ZCCHC14Q8WYQ9 949 aaKnown RBP12.19□□□□□ -0.46
TTC28-203ENST00000442232 TTC17Q96AE7 1141 aa12.19□□□□□ -0.46
TTC28-203ENST00000442232 SLC4A5Q9BY07 1137 aa12.19□□□□□ -0.46
TTC28-203ENST00000442232 NUCKS1Q9H1E3 243 aaKnown RBP12.19□□□□□ -0.46
TTC28-203ENST00000442232 THAP9Q9H5L6 903 aa12.19□□□□□ -0.46
TTC28-203ENST00000442232 C6orf106Q9H6K1 298 aaPredicted RBP12.19□□□□□ -0.46
TTC28-203ENST00000442232 SYNCQ9H7C4 482 aa12.19□□□□□ -0.46
TTC28-203ENST00000442232 KIAA1468Q9P260 1216 aa12.19□□□□□ -0.46
TTC28-203ENST00000442232 APEX2Q9UBZ4 518 aa12.19□□□□□ -0.46
TTC28-203ENST00000442232 ZMIZ1Q9ULJ6 1067 aa12.19□□□□□ -0.46
TTC28-203ENST00000442232 WASF3Q9UPY6 502 aa12.19□□□□□ -0.46
TTC28-203ENST00000442232 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.19□□□□□ -0.46
TTC28-203ENST00000442232 TMEM131Q92545 1883 aa12.19□□□□□ -0.46
TTC28-203ENST00000442232 SYNJ2BP-COX16A0A087WUM0 186 aa12.18□□□□□ -0.46
TTC28-203ENST00000442232 A0A1B0GVT2 93 aa12.18□□□□□ -0.46
TTC28-203ENST00000442232 LRRC72A6NJI9 287 aa12.18□□□□□ -0.46
TTC28-203ENST00000442232 SIN3BO75182 1162 aa12.18□□□□□ -0.46
TTC28-203ENST00000442232 GJB3O75712 270 aa12.18□□□□□ -0.46
TTC28-203ENST00000442232 TRUB2O95900 331 aaKnown RBP12.18□□□□□ -0.46
TTC28-203ENST00000442232 FYNP06241 537 aa12.18□□□□□ -0.46
TTC28-203ENST00000442232 TACR2P21452 398 aa12.18□□□□□ -0.46
TTC28-203ENST00000442232 OXCT1P55809 520 aa12.18□□□□□ -0.46
TTC28-203ENST00000442232 C21orf59P57076 290 aa12.18□□□□□ -0.46
TTC28-203ENST00000442232 ECT2LQ008S8 904 aa12.18□□□□□ -0.46
TTC28-203ENST00000442232 PTK2Q05397 1052 aa12.18□□□□□ -0.46
TTC28-203ENST00000442232 MTA1Q13330 715 aa12.18□□□□□ -0.46
TTC28-203ENST00000442232 SLC12A1Q13621 1099 aa12.18□□□□□ -0.46
TTC28-203ENST00000442232 CAMK4Q16566 473 aa12.18□□□□□ -0.46
TTC28-203ENST00000442232 HLA-BQ31612 363 aa12.18□□□□□ -0.46
TTC28-203ENST00000442232 INAVAQ3KP66 663 aa12.18□□□□□ -0.46
TTC28-203ENST00000442232 ZC3H12AQ5D1E8 599 aaKnown RBP12.18□□□□□ -0.46
TTC28-203ENST00000442232 EFHC1Q5JVL4 640 aa12.18□□□□□ -0.46
TTC28-203ENST00000442232 SYPL2Q5VXT5 272 aa12.18□□□□□ -0.46
TTC28-203ENST00000442232 RAP1GAP2Q684P5 730 aa12.18□□□□□ -0.46
TTC28-203ENST00000442232 USP30Q70CQ3 517 aa12.18□□□□□ -0.46
TTC28-203ENST00000442232 TMEM110Q86TL2 294 aa12.18□□□□□ -0.46
TTC28-203ENST00000442232 DHX40Q8IX18 779 aaKnown RBP12.18□□□□□ -0.46
TTC28-203ENST00000442232 SKA1Q96BD8 255 aa12.18□□□□□ -0.46
TTC28-203ENST00000442232 SLC39A13Q96H72 371 aa12.18□□□□□ -0.46
TTC28-203ENST00000442232 CAMK1GQ96NX5 476 aa12.18□□□□□ -0.46
TTC28-203ENST00000442232 PPP1R9BQ96SB3 815 aa12.18□□□□□ -0.46
TTC28-203ENST00000442232 OMDQ99983 421 aa12.18□□□□□ -0.46
TTC28-203ENST00000442232 RSPH9Q9H1X1 276 aaPredicted RBP12.18□□□□□ -0.46
TTC28-203ENST00000442232 PABPC3Q9H361 631 aaKnown RBP12.18□□□□□ -0.46
TTC28-203ENST00000442232 TM7SF3Q9NS93 570 aa12.18□□□□□ -0.46
TTC28-203ENST00000442232 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.18□□□□□ -0.46
TTC28-203ENST00000442232 FBXL12Q9NXK8 326 aa12.18□□□□□ -0.46
TTC28-203ENST00000442232 COX16Q9P0S2 106 aa12.18□□□□□ -0.46
TTC28-203ENST00000442232 KLK13Q9UKR3 277 aa12.18□□□□□ -0.46
TTC28-203ENST00000442232 ERVW-1Q9UQF0 538 aa12.18□□□□□ -0.46
TTC28-203ENST00000442232 MSRB2Q9Y3D2 182 aa12.18□□□□□ -0.46
TTC28-203ENST00000442232 IGF2RP11717 2491 aa12.17□□□□□ -0.46
TTC28-203ENST00000442232 TARSL2A2RTX5 802 aaKnown RBP12.17□□□□□ -0.46
TTC28-203ENST00000442232 GTPBP10A4D1E9 387 aaKnown RBP12.17□□□□□ -0.46
TTC28-203ENST00000442232 FAM47DPA6NHR8 397 aa12.17□□□□□ -0.46
TTC28-203ENST00000442232 KCNU1A8MYU2 1149 aa12.17□□□□□ -0.46
TTC28-203ENST00000442232 FLRT2O43155 660 aa12.17□□□□□ -0.46
TTC28-203ENST00000442232 PAPSS1O43252 624 aaPredicted RBP12.17□□□□□ -0.46
TTC28-203ENST00000442232 HSF2BPO75031 334 aa12.17□□□□□ -0.46
TTC28-203ENST00000442232 RNASEH2AO75792 299 aaKnown RBP12.17□□□□□ -0.46
TTC28-203ENST00000442232 ADH1BP00325 375 aa12.17□□□□□ -0.46
TTC28-203ENST00000442232 GLI1P08151 1106 aa12.17□□□□□ -0.46
TTC28-203ENST00000442232 FTH1P19P0C7X4 201 aa12.17□□□□□ -0.46
TTC28-203ENST00000442232 CD27P26842 260 aa12.17□□□□□ -0.46
TTC28-203ENST00000442232 CCR1P32246 355 aa12.17□□□□□ -0.46
TTC28-203ENST00000442232 KRT9P35527 623 aa12.17□□□□□ -0.46
TTC28-203ENST00000442232 GRIA4P48058 902 aa12.17□□□□□ -0.46
TTC28-203ENST00000442232 PSMD8P48556 350 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms