RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 VAT1Q99536 393 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 MTMR12Q9C0I1 747 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 AP4E1Q9UPM8 1137 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 ZNF521Q96K83 1311 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 CLOCKO15516 846 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 MTA2O94776 668 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 ICAM1P05362 532 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 FGRP09769 529 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 ITGA2P17301 1181 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 ME2P23368 584 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 PON1P27169 355 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 GP5P40197 560 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 CASP4P49662 377 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 RAB25P57735 213 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 BNC1Q01954 994 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 PTSQ03393 145 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 BST2Q10589 180 aaKnown RBP6.82□□□□□ -1.32
USP46-201ENST00000441222 KCNMA1Q12791 1236 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 STK4Q13043 487 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 RPTNQ6XPR3 784 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 PAGE2Q7Z2X7 111 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 METTL3Q86U44 580 aaKnown RBP6.82□□□□□ -1.32
USP46-201ENST00000441222 DEPDC4Q8N2C3 294 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 ZFP28Q8NHY6 868 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 UBASH3BQ8TF42 649 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 TEKT5Q96M29 485 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 SLC9A7Q96T83 725 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 C8orf4Q9NR00 106 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 MFHAS1Q9Y4C4 1052 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 CCL15-CCL14A0A0B4J2E2 113 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 E2F8A0AVK6 867 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 IRGMA1A4Y4 181 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 NCF1BA6NI72 391 aaPredicted RBP6.81□□□□□ -1.32
USP46-201ENST00000441222 NCF1CA8MVU1 366 aaPredicted RBP6.81□□□□□ -1.32
USP46-201ENST00000441222 RBAK-RBAKDNI3L0D1 243 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 CYP27B1O15528 508 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 BAIAP3O94812 1187 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 MYBL2P10244 700 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 NCF1P14598 390 aaPredicted RBP6.81□□□□□ -1.32
USP46-201ENST00000441222 KLRC1P26715 233 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 CCZ1BP86790 482 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 CCZ1P86791 482 aaPredicted RBP6.81□□□□□ -1.32
USP46-201ENST00000441222 CCL15Q16663 113 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 ZSWIM7Q19AV6 140 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 GALNT18Q6P9A2 607 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 ARHGEF19Q8IW93 802 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 TMC2Q8TDI7 906 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 FNIP1Q8TF40 1166 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 DCLK3Q9C098 648 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 ROGDIQ9GZN7 287 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 CYP4F12Q9HCS2 524 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 NT5MQ9NPB1 228 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 SPATA31A3Q5VYP0 1347 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 RAMP2O60895 175 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 CYP7B1O75881 506 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 RGS20O76081 388 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 GSTM5P46439 218 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 SMCO1Q147U7 214 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 RBM43Q6ZSC3 357 aaKnown RBP6.81□□□□□ -1.32
USP46-201ENST00000441222 TRMT11Q7Z4G4 463 aaKnown RBP6.81□□□□□ -1.32
USP46-201ENST00000441222 HEATR4Q86WZ0 1026 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 DEFB107AQ8IZN7 70 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 SMYD1Q8NB12 490 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 DAGLBQ8NCG7 672 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 WDR60Q8WVS4 1066 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 NACC2Q96BF6 587 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 SGF29Q96ES7 293 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 ACOX2Q99424 681 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 TBCBQ99426 244 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 TBCDQ9BTW9 1192 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 MLPHQ9BV36 600 aaPredicted RBP6.81□□□□□ -1.32
USP46-201ENST00000441222 NRDE2Q9H7Z3 1164 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 CLN6Q9NWW5 311 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 BTBD7Q9P203 1132 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 LIMD1Q9UGP4 676 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.81□□□□□ -1.32
USP46-201ENST00000441222 GHRP10912 638 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 TCF4P15884 667 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 FGD3Q5JSP0 725 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 LYPLAL1Q5VWZ2 237 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 C11orf63Q6NUN7 778 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 ILDR2Q71H61 639 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 GATAD2AQ86YP4 633 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 SCAIQ8N9R8 606 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 FAM172AQ8WUF8 416 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 ATL1Q8WXF7 558 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 PAFAH2Q99487 392 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 PAIP1Q9H074 479 aaKnown RBP6.81□□□□□ -1.32
USP46-201ENST00000441222 TMBIM4Q9HC24 238 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 DNPEPQ9ULA0 475 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 IGSF6O95976 241 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 ZCCHC18P0CG32 403 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 ALOX12P18054 663 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 PBLDP30039 288 aaPredicted RBP6.81□□□□□ -1.32
USP46-201ENST00000441222 TCF7P36402 384 aaPredicted RBP6.81□□□□□ -1.32
USP46-201ENST00000441222 PLIN5Q00G26 463 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 CAMK1Q14012 370 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 ZC2HC1CQ53FD0 456 aaPredicted RBP6.81□□□□□ -1.32
USP46-201ENST00000441222 SPDYCQ5MJ68 293 aa6.81□□□□□ -1.32
USP46-201ENST00000441222 LRRC34Q8IZ02 419 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms