RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 ABCC13Q9NSE7 274 aa4.12□□□□□ -1.75
HMGB1P37-201ENST00000439613 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.12□□□□□ -1.75
HMGB1P37-201ENST00000439613 MARCH5Q9NX47 278 aa4.12□□□□□ -1.75
HMGB1P37-201ENST00000439613 SPG21Q9NZD8 308 aa4.12□□□□□ -1.75
HMGB1P37-201ENST00000439613 WHRNQ9P202 907 aa4.12□□□□□ -1.75
HMGB1P37-201ENST00000439613 RCOR3Q9P2K3 495 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P37-201ENST00000439613 MTRF1LQ9UGC7 380 aaKnown RBP4.12□□□□□ -1.75
HMGB1P37-201ENST00000439613 ZNF148Q9UQR1 794 aa4.12□□□□□ -1.75
HMGB1P37-201ENST00000439613 SSX2IPQ9Y2D8 614 aa4.12□□□□□ -1.75
HMGB1P37-201ENST00000439613 NR2E1Q9Y466 385 aa4.12□□□□□ -1.75
HMGB1P37-201ENST00000439613 PCDHB12Q9Y5F1 795 aa4.12□□□□□ -1.75
HMGB1P37-201ENST00000439613 BACE2Q9Y5Z0 518 aa4.12□□□□□ -1.75
HMGB1P37-201ENST00000439613 PLXNA3P51805 1871 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 MYO16Q9Y6X6 1858 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 GREB1Q4ZG55 1949 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 TRANK1O15050 2925 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 TCRBV7S2A1N4TA0A589 114 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 CFAP69A5D8W1 941 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 YJEFN3A6XGL0 299 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 E7ENQ6 273 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 F8W810 466 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 APOC4-APOC2K7ER74 178 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 M0QYT0 321 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 APOL1O14791 398 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 MCF2LO15068 1137 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 DAPK3O43293 454 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 LIASO43766 372 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 OPA1O60313 960 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 CST8O60676 142 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 STK10O94804 968 aaKnown RBP4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 EFEMP2O95967 443 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 APOC2P02655 101 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 SOD2P04179 222 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 USP17L7P0C7H9 530 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 HAPLN1P10915 354 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 NCAM1P13591 858 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 KRT10P13645 584 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 ATF2P15336 505 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 CSF2RAP15509 400 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 TCF4P15884 667 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 CYP2F1P24903 491 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 IL1R2P27930 398 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 STIP1P31948 543 aaKnown RBP4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 L1CAMP32004 1257 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 ADRA1BP35368 520 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 ADCY8P40145 1251 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 ARL4AP40617 200 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 TNNT3P45378 269 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 GRIA4P48058 902 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 GLUD2P49448 558 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 CARSP49589 748 aaKnown RBP4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 CXCR3P49682 368 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 NDUFV1P49821 464 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 ARSEP51690 589 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 KPNA1P52294 538 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 CACNA2D1P54289 1103 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 HDAC4P56524 1084 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 WDR5P61964 334 aaKnown RBP4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 YWHAGP61981 247 aaKnown RBP eCLIP4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 DSG1Q02413 1049 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 FPGSQ05932 587 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 DEUP1Q05D60 604 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 SCAPQ12770 1279 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 NME3Q13232 169 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 XRCC4Q13426 336 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 SNX1Q13596 522 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 PTK6Q13882 451 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 DPYSL3Q14195 570 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 HLTFQ14527 1009 aaKnown RBP eCLIP4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 PSMD5Q16401 504 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 DPYSL2Q16555 572 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 SMTNL2Q2TAL5 461 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 ATP13A4Q4VNC1 1196 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 PPP6R3Q5H9R7 873 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 KCNT1Q5JUK3 1230 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 SPDYCQ5MJ68 293 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 BRMS1LQ5PSV4 323 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 CFAP58Q5T655 872 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 DAB2IPQ5VWQ8 1189 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 BSPRYQ5W0U4 402 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 KAZNQ674X7 775 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 TXNRD3NBQ6F5E7 133 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 SLC8B1Q6J4K2 584 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 TRNP1Q6NT89 227 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 TTC27Q6P3X3 843 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 PSRC1Q6PGN9 363 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 DENND5BQ6ZUT9 1274 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 CYP4V2Q6ZWL3 525 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 BNIPLQ7Z465 357 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 UBE2Q1Q7Z7E8 422 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 PCGF5Q86SE9 256 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 TADA2BQ86TJ2 420 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 DDX53Q86TM3 631 aaKnown RBP4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 DMRTC2Q8IXT2 367 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 ZDHHC14Q8IZN3 488 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 SLC39A11Q8N1S5 342 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 ZNF276Q8N554 614 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 MREGQ8N565 214 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 ALLCQ8N6M5 410 aa4.11□□□□□ -1.75
HMGB1P37-201ENST00000439613 IL22RA1Q8N6P7 574 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms