RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 AURKCQ9UQB9 309 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 TRUB2O95900 331 aaKnown RBP10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 SNRPAP09012 282 aaKnown RBP10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 TSPAN8P19075 237 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 CASP2P42575 452 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 ALDH1A3P47895 512 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 CHN2P52757 468 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 MAP3K10Q02779 954 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 CACNB2Q08289 660 aaPredicted RBP10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 ZNF618Q5T7W0 954 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 PID1Q7Z2X4 250 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 NUF2Q9BZD4 464 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 TRIM8Q9BZR9 551 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 RSAD1Q9HA92 442 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 LRRC4Q9HBW1 653 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 SNX13Q9Y5W8 968 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 AP4B1Q9Y6B7 739 aa10.2□□□□□ -0.78
CDC42SE1-202ENST00000439374 SAC3D1A6NKF1 404 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 LSM8O95777 96 aaKnown RBP10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 ERVK-10P10266 1014 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 AP3M2P53677 418 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 ACTR3P61158 418 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 RALGDSQ12967 914 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 HEATR6Q6AI08 1181 aaKnown RBP10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 RNF111Q6ZNA4 994 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 C10orf107Q8IVU9 208 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 OR6J1Q8NGC5 347 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 SLC16A10Q8TF71 515 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 RPL10LQ96L21 214 aaKnown RBP10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 CNPY3Q9BT09 278 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 SNRNP25Q9BV90 132 aaKnown RBP10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 EIF2AQ9BY44 585 aaKnown RBP10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 PAIP1Q9H074 479 aaKnown RBP10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 NXF3Q9H4D5 531 aaKnown RBP10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 CITO14578 2027 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 COL11A2P13942 1736 aaPredicted RBP10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 WDR27A2RRH5 827 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 FAM149AA5PLN7 773 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 PMM2O15305 246 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 MYL3P08590 195 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 UQCRBP14927 111 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 LMO2P25791 158 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 MBTD1Q05BQ5 628 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 ART3Q13508 389 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 PRKD1Q15139 912 aaPredicted RBP10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 SLC44A4Q53GD3 710 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 EFHC2Q5JST6 749 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 HABP4Q5JVS0 413 aaKnown RBP10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 RPS27LQ71UM5 84 aaKnown RBP10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 ERO1BQ86YB8 467 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 TRIM42Q8IWZ5 723 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 ANKRD13AQ8IZ07 590 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 BHLHE22Q8NFJ8 381 aaPredicted RBP10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 SLC2A14Q8TDB8 520 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 DNAJB3Q8WWF6 145 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 DCUN1D1Q96GG9 259 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 SENP6Q9GZR1 1112 aaPredicted RBP10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 CDHR5Q9HBB8 845 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 ARHGEF4Q9NR80 690 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 SLC24A2Q9UI40 661 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 NUDT5Q9UKK9 219 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 POMPQ9Y244 141 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 DNAJA2O60884 412 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 TPH1P17752 444 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 HDCP19113 662 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 ABCD1P33897 745 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 ARL4AP40617 200 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 SLC1A6P48664 564 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 BEX3Q00994 111 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 PLIN5Q00G26 463 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 MSLNQ13421 630 aaPredicted RBP10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 TARBP2Q15633 366 aaKnown RBP10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 ANKDD1AQ495B1 522 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 SH3D19Q5HYK7 790 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 KCNT2Q6UVM3 1135 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 EMID1Q96A84 441 aaPredicted RBP10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 PFDN4Q9NQP4 134 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 THEGQ9P2T0 379 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 SHOC2Q9UQ13 582 aa10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 HBS1LQ9Y450 684 aaKnown RBP10.19□□□□□ -0.78
CDC42SE1-202ENST00000439374 PRRC2BQ5JSZ5 2229 aaKnown RBP10.18□□□□□ -0.78
CDC42SE1-202ENST00000439374 J3QRK9 145 aa10.18□□□□□ -0.78
CDC42SE1-202ENST00000439374 FZD9O00144 591 aa10.18□□□□□ -0.78
CDC42SE1-202ENST00000439374 SIN3BO75182 1162 aa10.18□□□□□ -0.78
CDC42SE1-202ENST00000439374 TGFB3P10600 412 aa10.18□□□□□ -0.78
CDC42SE1-202ENST00000439374 EEF1B2P24534 225 aaKnown RBP10.18□□□□□ -0.78
CDC42SE1-202ENST00000439374 CYP2F1P24903 491 aa10.18□□□□□ -0.78
CDC42SE1-202ENST00000439374 CCNG1P51959 295 aa10.18□□□□□ -0.78
CDC42SE1-202ENST00000439374 TAP1Q03518 808 aa10.18□□□□□ -0.78
CDC42SE1-202ENST00000439374 GEN1Q17RS7 908 aa10.18□□□□□ -0.78
CDC42SE1-202ENST00000439374 MYLK3Q32MK0 819 aa10.18□□□□□ -0.78
CDC42SE1-202ENST00000439374 DNAL1Q4LDG9 190 aa10.18□□□□□ -0.78
CDC42SE1-202ENST00000439374 LGSNQ5TDP6 509 aa10.18□□□□□ -0.78
CDC42SE1-202ENST00000439374 SLC9A4Q6AI14 798 aa10.18□□□□□ -0.78
CDC42SE1-202ENST00000439374 BBS12Q6ZW61 710 aa10.18□□□□□ -0.78
CDC42SE1-202ENST00000439374 CLVS1Q8IUQ0 354 aaPredicted RBP10.18□□□□□ -0.78
CDC42SE1-202ENST00000439374 ZNF786Q8N393 782 aa10.18□□□□□ -0.78
CDC42SE1-202ENST00000439374 STKLD1Q8NE28 680 aa10.18□□□□□ -0.78
CDC42SE1-202ENST00000439374 ZFP28Q8NHY6 868 aa10.18□□□□□ -0.78
CDC42SE1-202ENST00000439374 EDEM1Q92611 657 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms