RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 GANCQ8TET4 914 aa19.1■□□□□ 0.65
AC004540.1-201ENST00000439120 SHC3Q92529 594 aa19.1■□□□□ 0.65
AC004540.1-201ENST00000439120 TTC17Q96AE7 1141 aa19.1■□□□□ 0.65
AC004540.1-201ENST00000439120 PPP1R13BQ96KQ4 1090 aa19.1■□□□□ 0.65
AC004540.1-201ENST00000439120 SYNCQ9H7C4 482 aa19.1■□□□□ 0.65
AC004540.1-201ENST00000439120 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.1■□□□□ 0.65
AC004540.1-201ENST00000439120 COX16Q9P0S2 106 aa19.1■□□□□ 0.65
AC004540.1-201ENST00000439120 DACH1Q9UI36 760 aa19.1■□□□□ 0.65
AC004540.1-201ENST00000439120 NCKAP1Q9Y2A7 1128 aa19.1■□□□□ 0.65
AC004540.1-201ENST00000439120 PCDHB9Q9Y5E1 797 aa19.1■□□□□ 0.65
AC004540.1-201ENST00000439120 SPAARA0A1B0GVQ0 90 aa19.09■□□□□ 0.65
AC004540.1-201ENST00000439120 PES1O00541 588 aaKnown RBP19.09■□□□□ 0.65
AC004540.1-201ENST00000439120 SEMA4FO95754 770 aa19.09■□□□□ 0.65
AC004540.1-201ENST00000439120 CER1O95813 267 aa19.09■□□□□ 0.65
AC004540.1-201ENST00000439120 GLI1P08151 1106 aa19.09■□□□□ 0.65
AC004540.1-201ENST00000439120 PRKCSHP14314 528 aaPredicted RBP19.09■□□□□ 0.65
AC004540.1-201ENST00000439120 ABCB4P21439 1286 aa19.09■□□□□ 0.65
AC004540.1-201ENST00000439120 TACR2P21452 398 aa19.09■□□□□ 0.65
AC004540.1-201ENST00000439120 ACSL1P33121 698 aa19.09■□□□□ 0.65
AC004540.1-201ENST00000439120 SFSWAPQ12872 951 aaKnown RBP19.09■□□□□ 0.65
AC004540.1-201ENST00000439120 PITRM1Q5JRX3 1037 aa19.09■□□□□ 0.65
AC004540.1-201ENST00000439120 IRF2BP1Q8IU81 584 aa19.09■□□□□ 0.65
AC004540.1-201ENST00000439120 MYEOVQ96EZ4 313 aa19.09■□□□□ 0.65
AC004540.1-201ENST00000439120 CPXM1Q96SM3 734 aa19.09■□□□□ 0.65
AC004540.1-201ENST00000439120 PDCL3Q9H2J4 239 aa19.09■□□□□ 0.65
AC004540.1-201ENST00000439120 CLSTN2Q9H4D0 955 aa19.09■□□□□ 0.65
AC004540.1-201ENST00000439120 DDIT4Q9NX09 232 aa19.09■□□□□ 0.65
AC004540.1-201ENST00000439120 KIAA1522Q9P206 1035 aaPredicted RBP19.09■□□□□ 0.65
AC004540.1-201ENST00000439120 XPO7Q9UIA9 1087 aaKnown RBP19.09■□□□□ 0.65
AC004540.1-201ENST00000439120 DNAJC12Q9UKB3 198 aa19.09■□□□□ 0.65
AC004540.1-201ENST00000439120 PCDHGC3Q9UN70 934 aa19.09■□□□□ 0.65
AC004540.1-201ENST00000439120 KCNU1A8MYU2 1149 aa19.08■□□□□ 0.64
AC004540.1-201ENST00000439120 HSF2BPO75031 334 aa19.08■□□□□ 0.64
AC004540.1-201ENST00000439120 CD59P13987 128 aa19.08■□□□□ 0.64
AC004540.1-201ENST00000439120 SPINK2P20155 84 aa19.08■□□□□ 0.64
AC004540.1-201ENST00000439120 CCR1P32246 355 aa19.08■□□□□ 0.64
AC004540.1-201ENST00000439120 TAF5Q15542 800 aa19.08■□□□□ 0.64
AC004540.1-201ENST00000439120 HNRNPA1L2Q32P51 320 aaKnown RBP19.08■□□□□ 0.64
AC004540.1-201ENST00000439120 FSCBQ5H9T9 825 aa19.08■□□□□ 0.64
AC004540.1-201ENST00000439120 RABGAP1LQ5R372 815 aa19.08■□□□□ 0.64
AC004540.1-201ENST00000439120 OR6B2Q6IFH4 312 aa19.08■□□□□ 0.64
AC004540.1-201ENST00000439120 IL27RAQ6UWB1 636 aa19.08■□□□□ 0.64
AC004540.1-201ENST00000439120 MMS22LQ6ZRQ5 1243 aa19.08■□□□□ 0.64
AC004540.1-201ENST00000439120 C11orf57Q6ZUT1 292 aaPredicted RBP19.08■□□□□ 0.64
AC004540.1-201ENST00000439120 DHX40Q8IX18 779 aaKnown RBP19.08■□□□□ 0.64
AC004540.1-201ENST00000439120 DEFB106AQ8N104 65 aa19.08■□□□□ 0.64
AC004540.1-201ENST00000439120 LMLNQ96KR4 655 aa19.08■□□□□ 0.64
AC004540.1-201ENST00000439120 RSPH9Q9H1X1 276 aaPredicted RBP19.08■□□□□ 0.64
AC004540.1-201ENST00000439120 C6orf106Q9H6K1 298 aaPredicted RBP19.08■□□□□ 0.64
AC004540.1-201ENST00000439120 SGK2Q9HBY8 427 aa19.08■□□□□ 0.64
AC004540.1-201ENST00000439120 ASNSD1Q9NWL6 643 aa19.08■□□□□ 0.64
AC004540.1-201ENST00000439120 SCML1Q9UN30 329 aa19.08■□□□□ 0.64
AC004540.1-201ENST00000439120 ERVW-1Q9UQF0 538 aa19.08■□□□□ 0.64
AC004540.1-201ENST00000439120 SIN3BO75182 1162 aa19.07■□□□□ 0.64
AC004540.1-201ENST00000439120 GRAP2O75791 330 aa19.07■□□□□ 0.64
AC004540.1-201ENST00000439120 KRT37O76014 449 aa19.07■□□□□ 0.64
AC004540.1-201ENST00000439120 IGLV3-25P01717 112 aa19.07■□□□□ 0.64
AC004540.1-201ENST00000439120 SRPRAP08240 638 aaKnown RBP19.07■□□□□ 0.64
AC004540.1-201ENST00000439120 NNMTP40261 264 aa19.07■□□□□ 0.64
AC004540.1-201ENST00000439120 MATKP42679 507 aa19.07■□□□□ 0.64
AC004540.1-201ENST00000439120 AFF3P51826 1226 aaKnown RBP19.07■□□□□ 0.64
AC004540.1-201ENST00000439120 ECT2LQ008S8 904 aa19.07■□□□□ 0.64
AC004540.1-201ENST00000439120 TEAD4Q15561 434 aa19.07■□□□□ 0.64
AC004540.1-201ENST00000439120 TTC39BQ5VTQ0 682 aaPredicted RBP19.07■□□□□ 0.64
AC004540.1-201ENST00000439120 SMYD5Q6GMV2 418 aa19.07■□□□□ 0.64
AC004540.1-201ENST00000439120 LRSAM1Q6UWE0 723 aa19.07■□□□□ 0.64
AC004540.1-201ENST00000439120 UNQ6494/PRO21346Q6UXR6 183 aa19.07■□□□□ 0.64
AC004540.1-201ENST00000439120 NAXDQ8IW45 347 aa19.07■□□□□ 0.64
AC004540.1-201ENST00000439120 KDM1BQ8NB78 822 aa19.07■□□□□ 0.64
AC004540.1-201ENST00000439120 C1orf131Q8NDD1 294 aaKnown RBP19.07■□□□□ 0.64
AC004540.1-201ENST00000439120 SCNM1Q9BWG6 230 aa19.07■□□□□ 0.64
AC004540.1-201ENST00000439120 ADAM33Q9BZ11 813 aa19.07■□□□□ 0.64
AC004540.1-201ENST00000439120 NUP62CLQ9H1M0 184 aa19.07■□□□□ 0.64
AC004540.1-201ENST00000439120 NDST4Q9H3R1 872 aa19.07■□□□□ 0.64
AC004540.1-201ENST00000439120 MTG2Q9H4K7 406 aa19.07■□□□□ 0.64
AC004540.1-201ENST00000439120 GAREM1Q9H706 876 aa19.07■□□□□ 0.64
AC004540.1-201ENST00000439120 INTS6Q9UL03 887 aaKnown RBP19.07■□□□□ 0.64
AC004540.1-201ENST00000439120 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.07■□□□□ 0.64
AC004540.1-201ENST00000439120 CHD8Q9HCK8 2581 aa19.06■□□□□ 0.64
AC004540.1-201ENST00000439120 EDDM13A0A1B0GTR0 161 aa19.06■□□□□ 0.64
AC004540.1-201ENST00000439120 SH3BP5O60239 455 aa19.06■□□□□ 0.64
AC004540.1-201ENST00000439120 FSBPO95073 299 aa19.06■□□□□ 0.64
AC004540.1-201ENST00000439120 TRIM16O95361 564 aa19.06■□□□□ 0.64
AC004540.1-201ENST00000439120 BPIFB4P59827 614 aa19.06■□□□□ 0.64
AC004540.1-201ENST00000439120 PITX1P78337 314 aaPredicted RBP19.06■□□□□ 0.64
AC004540.1-201ENST00000439120 NME3Q13232 169 aa19.06■□□□□ 0.64
AC004540.1-201ENST00000439120 MTA1Q13330 715 aa19.06■□□□□ 0.64
AC004540.1-201ENST00000439120 SLC12A1Q13621 1099 aa19.06■□□□□ 0.64
AC004540.1-201ENST00000439120 DPCR1Q3MIW9 517 aa19.06■□□□□ 0.64
AC004540.1-201ENST00000439120 VWA3BQ502W6 1294 aa19.06■□□□□ 0.64
AC004540.1-201ENST00000439120 HSP90AA4PQ58FG1 418 aa19.06■□□□□ 0.64
AC004540.1-201ENST00000439120 FAM183BPQ6ZVS7 135 aa19.06■□□□□ 0.64
AC004540.1-201ENST00000439120 SLC47A2Q86VL8 602 aa19.06■□□□□ 0.64
AC004540.1-201ENST00000439120 WDTC1Q8N5D0 677 aa19.06■□□□□ 0.64
AC004540.1-201ENST00000439120 MYO19Q96H55 970 aa19.06■□□□□ 0.64
AC004540.1-201ENST00000439120 SLC2A13Q96QE2 648 aa19.06■□□□□ 0.64
AC004540.1-201ENST00000439120 TUBGCP2Q9BSJ2 902 aa19.06■□□□□ 0.64
AC004540.1-201ENST00000439120 PABPC3Q9H361 631 aaKnown RBP19.06■□□□□ 0.64
AC004540.1-201ENST00000439120 A0A1B0GVM2 712 aa19.05■□□□□ 0.64
AC004540.1-201ENST00000439120 TARSL2A2RTX5 802 aaKnown RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms