RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 HLA-FP30511 346 aa17.45■□□□□ 0.38
TARDBP-203ENST00000439080 AVPR2P30518 371 aa17.45■□□□□ 0.38
TARDBP-203ENST00000439080 SEC13P55735 322 aa17.45■□□□□ 0.38
TARDBP-203ENST00000439080 FBXO43Q4G163 708 aa17.45■□□□□ 0.38
TARDBP-203ENST00000439080 RHOT2Q8IXI1 618 aa17.45■□□□□ 0.38
TARDBP-203ENST00000439080 SYNPOQ8N3V7 929 aa17.45■□□□□ 0.38
TARDBP-203ENST00000439080 ACRBPQ8NEB7 543 aa17.45■□□□□ 0.38
TARDBP-203ENST00000439080 SLC35G2Q8TBE7 412 aa17.45■□□□□ 0.38
TARDBP-203ENST00000439080 PCSK1NQ9UHG2 260 aa17.45■□□□□ 0.38
TARDBP-203ENST00000439080 FZD10Q9ULW2 581 aa17.45■□□□□ 0.38
TARDBP-203ENST00000439080 CHD5Q8TDI0 1954 aa17.44■□□□□ 0.38
TARDBP-203ENST00000439080 IGLV3-10A0A075B6K4 115 aa17.44■□□□□ 0.38
TARDBP-203ENST00000439080 PRPSAP2O60256 369 aa17.44■□□□□ 0.38
TARDBP-203ENST00000439080 SRGAP2O75044 1071 aa17.44■□□□□ 0.38
TARDBP-203ENST00000439080 PCK1P35558 622 aa17.44■□□□□ 0.38
TARDBP-203ENST00000439080 NRG1Q02297 640 aaPredicted RBP17.44■□□□□ 0.38
TARDBP-203ENST00000439080 ACAP1Q15027 740 aa17.44■□□□□ 0.38
TARDBP-203ENST00000439080 GEN1Q17RS7 908 aa17.44■□□□□ 0.38
TARDBP-203ENST00000439080 C5orf22Q49AR2 442 aa17.44■□□□□ 0.38
TARDBP-203ENST00000439080 LRRC31Q6UY01 552 aa17.44■□□□□ 0.38
TARDBP-203ENST00000439080 CCDC117Q8IWD4 279 aaPredicted RBP17.44■□□□□ 0.38
TARDBP-203ENST00000439080 CCAR2Q8N163 923 aaKnown RBP17.44■□□□□ 0.38
TARDBP-203ENST00000439080 ZNF557Q8N988 423 aaPredicted RBP17.44■□□□□ 0.38
TARDBP-203ENST00000439080 NCAPGQ9BPX3 1015 aa17.44■□□□□ 0.38
TARDBP-203ENST00000439080 OSBPL2Q9H1P3 480 aa17.44■□□□□ 0.38
TARDBP-203ENST00000439080 ABCB8Q9NUT2 735 aa17.44■□□□□ 0.38
TARDBP-203ENST00000439080 OR12D3Q9UGF7 316 aa17.44■□□□□ 0.38
TARDBP-203ENST00000439080 GGA2Q9UJY4 613 aa17.44■□□□□ 0.38
TARDBP-203ENST00000439080 TFR2Q9UP52 801 aa17.44■□□□□ 0.38
TARDBP-203ENST00000439080 AP4E1Q9UPM8 1137 aa17.44■□□□□ 0.38
TARDBP-203ENST00000439080 REXO2Q9Y3B8 237 aaKnown RBP17.44■□□□□ 0.38
TARDBP-203ENST00000439080 MYO18AQ92614 2054 aaKnown RBP17.44■□□□□ 0.38
TARDBP-203ENST00000439080 A0A0A0MRY4 1105 aa17.43■□□□□ 0.38
TARDBP-203ENST00000439080 ANTXRLA6NF34 631 aa17.43■□□□□ 0.38
TARDBP-203ENST00000439080 PRRT4C9JH25 899 aa17.43■□□□□ 0.38
TARDBP-203ENST00000439080 FAM72CH0Y354 149 aa17.43■□□□□ 0.38
TARDBP-203ENST00000439080 H0Y626 953 aa17.43■□□□□ 0.38
TARDBP-203ENST00000439080 MTA2O94776 668 aa17.43■□□□□ 0.38
TARDBP-203ENST00000439080 TCF4P15884 667 aa17.43■□□□□ 0.38
TARDBP-203ENST00000439080 CD70P32970 193 aa17.43■□□□□ 0.38
TARDBP-203ENST00000439080 LMAN2Q12907 356 aa17.43■□□□□ 0.38
TARDBP-203ENST00000439080 GAS6Q14393 721 aa17.43■□□□□ 0.38
TARDBP-203ENST00000439080 ALFQ53S48 1182 aa17.43■□□□□ 0.38
TARDBP-203ENST00000439080 ARTNQ5T4W7 220 aa17.43■□□□□ 0.38
TARDBP-203ENST00000439080 FAM72AQ5TYM5 149 aa17.43■□□□□ 0.38
TARDBP-203ENST00000439080 MANEALQ5VSG8 457 aa17.43■□□□□ 0.38
TARDBP-203ENST00000439080 FAM72DQ6L9T8 149 aa17.43■□□□□ 0.38
TARDBP-203ENST00000439080 NUDT18Q6ZVK8 323 aa17.43■□□□□ 0.38
TARDBP-203ENST00000439080 CYP4V2Q6ZWL3 525 aaPredicted RBP17.43■□□□□ 0.38
TARDBP-203ENST00000439080 CHST9Q7L1S5 443 aa17.43■□□□□ 0.38
TARDBP-203ENST00000439080 FAM72BQ86X60 149 aa17.43■□□□□ 0.38
TARDBP-203ENST00000439080 AHI1Q8N157 1196 aa17.43■□□□□ 0.38
TARDBP-203ENST00000439080 PYROXD2Q8N2H3 581 aa17.43■□□□□ 0.38
TARDBP-203ENST00000439080 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.43■□□□□ 0.38
TARDBP-203ENST00000439080 CCDC112Q8NEF3 446 aa17.43■□□□□ 0.38
TARDBP-203ENST00000439080 RPLP0P6Q8NHW5 317 aa17.43■□□□□ 0.38
TARDBP-203ENST00000439080 IER2Q9BTL4 223 aa17.43■□□□□ 0.38
TARDBP-203ENST00000439080 SNRNP25Q9BV90 132 aaKnown RBP17.43■□□□□ 0.38
TARDBP-203ENST00000439080 MAGEB5Q9BZ81 275 aa17.43■□□□□ 0.38
TARDBP-203ENST00000439080 GPATCH2LQ9NWQ4 482 aa17.43■□□□□ 0.38
TARDBP-203ENST00000439080 LCMT1Q9UIC8 334 aa17.43■□□□□ 0.38
TARDBP-203ENST00000439080 USP18Q9UMW8 372 aa17.43■□□□□ 0.38
TARDBP-203ENST00000439080 NEU3Q9UQ49 428 aa17.43■□□□□ 0.38
TARDBP-203ENST00000439080 CLDN11O75508 207 aa17.42■□□□□ 0.38
TARDBP-203ENST00000439080 CNTN5O94779 1100 aa17.42■□□□□ 0.38
TARDBP-203ENST00000439080 LRIG2O94898 1065 aa17.42■□□□□ 0.38
TARDBP-203ENST00000439080 PROSCO94903 275 aa17.42■□□□□ 0.38
TARDBP-203ENST00000439080 CHRM1P11229 460 aaPredicted RBP17.42■□□□□ 0.38
TARDBP-203ENST00000439080 PABPC1P11940 636 aaKnown RBP17.42■□□□□ 0.38
TARDBP-203ENST00000439080 TNFRSF4P43489 277 aa17.42■□□□□ 0.38
TARDBP-203ENST00000439080 CDH4P55283 916 aa17.42■□□□□ 0.38
TARDBP-203ENST00000439080 SLC25A11Q02978 314 aaKnown RBP17.42■□□□□ 0.38
TARDBP-203ENST00000439080 MTAPQ13126 283 aa17.42■□□□□ 0.38
TARDBP-203ENST00000439080 GSE1Q14687 1217 aa17.42■□□□□ 0.38
TARDBP-203ENST00000439080 SMTNL2Q2TAL5 461 aa17.42■□□□□ 0.38
TARDBP-203ENST00000439080 C2orf27AQ580R0 203 aa17.42■□□□□ 0.38
TARDBP-203ENST00000439080 FSCBQ5H9T9 825 aa17.42■□□□□ 0.38
TARDBP-203ENST00000439080 PKN3Q6P5Z2 889 aa17.42■□□□□ 0.38
TARDBP-203ENST00000439080 TFAP2DQ7Z6R9 452 aa17.42■□□□□ 0.38
TARDBP-203ENST00000439080 DTWD2Q8NBA8 298 aa17.42■□□□□ 0.38
TARDBP-203ENST00000439080 CCDC26Q8TAB7 109 aa17.42■□□□□ 0.38
TARDBP-203ENST00000439080 FIBINQ8TAL6 211 aa17.42■□□□□ 0.38
TARDBP-203ENST00000439080 WFIKKN2Q8TEU8 576 aa17.42■□□□□ 0.38
TARDBP-203ENST00000439080 ANP32BQ92688 251 aaKnown RBP17.42■□□□□ 0.38
TARDBP-203ENST00000439080 DESI2Q9BSY9 194 aa17.42■□□□□ 0.38
TARDBP-203ENST00000439080 ZYG11BQ9C0D3 744 aa17.42■□□□□ 0.38
TARDBP-203ENST00000439080 SPATA6Q9NWH7 488 aaPredicted RBP17.42■□□□□ 0.38
TARDBP-203ENST00000439080 MPP6Q9NZW5 540 aa17.42■□□□□ 0.38
TARDBP-203ENST00000439080 PPARGC1AQ9UBK2 798 aaKnown RBP17.42■□□□□ 0.38
TARDBP-203ENST00000439080 CKAP5Q14008 2032 aa17.42■□□□□ 0.38
TARDBP-203ENST00000439080 DRGXA6NNA5 263 aa17.41■□□□□ 0.38
TARDBP-203ENST00000439080 TMEM110-MUSTN1A8MSY1 372 aa17.41■□□□□ 0.38
TARDBP-203ENST00000439080 IL1R2P27930 398 aa17.41■□□□□ 0.38
TARDBP-203ENST00000439080 L1CAMP32004 1257 aa17.41■□□□□ 0.38
TARDBP-203ENST00000439080 MAN1A1P33908 653 aa17.41■□□□□ 0.38
TARDBP-203ENST00000439080 TIE1P35590 1138 aa17.41■□□□□ 0.38
TARDBP-203ENST00000439080 KIR2DL1P43626 348 aaPredicted RBP17.41■□□□□ 0.38
TARDBP-203ENST00000439080 EIF4HQ15056 248 aaKnown RBP17.41■□□□□ 0.38
TARDBP-203ENST00000439080 TCEAL1Q15170 157 aa17.41■□□□□ 0.38
TARDBP-203ENST00000439080 CA9Q16790 459 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms