RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 RAB27AP51159 221 aa3.46□□□□□ -1.86
HMGB1P18-201ENST00000438801 STK3Q13188 491 aa3.46□□□□□ -1.86
HMGB1P18-201ENST00000438801 MTX1Q13505 466 aa3.46□□□□□ -1.86
HMGB1P18-201ENST00000438801 PRKG1Q13976 671 aa3.46□□□□□ -1.86
HMGB1P18-201ENST00000438801 NPY5RQ15761 445 aa3.46□□□□□ -1.86
HMGB1P18-201ENST00000438801 PFKFB3Q16875 520 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P18-201ENST00000438801 CST9Q5W186 159 aa3.46□□□□□ -1.86
HMGB1P18-201ENST00000438801 SWSAP1Q6NVH7 229 aa3.46□□□□□ -1.86
HMGB1P18-201ENST00000438801 LVRNQ6Q4G3 990 aa3.46□□□□□ -1.86
HMGB1P18-201ENST00000438801 SMIM5Q71RC9 77 aa3.46□□□□□ -1.86
HMGB1P18-201ENST00000438801 MMP21Q8N119 569 aa3.46□□□□□ -1.86
HMGB1P18-201ENST00000438801 METTL25Q8N6Q8 603 aa3.46□□□□□ -1.86
HMGB1P18-201ENST00000438801 PNPLA1Q8N8W4 532 aa3.46□□□□□ -1.86
HMGB1P18-201ENST00000438801 SMRP1Q8NCR6 262 aa3.46□□□□□ -1.86
HMGB1P18-201ENST00000438801 MPLKIPQ8TAP9 179 aa3.46□□□□□ -1.86
HMGB1P18-201ENST00000438801 ZKSCAN4Q969J2 545 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P18-201ENST00000438801 NMD3Q96D46 503 aaKnown RBP3.46□□□□□ -1.86
HMGB1P18-201ENST00000438801 RMDN1Q96DB5 314 aa3.46□□□□□ -1.86
HMGB1P18-201ENST00000438801 GPATCH3Q96I76 525 aa3.46□□□□□ -1.86
HMGB1P18-201ENST00000438801 GDF15Q99988 308 aa3.46□□□□□ -1.86
HMGB1P18-201ENST00000438801 C22orf23Q9BZE7 217 aa3.46□□□□□ -1.86
HMGB1P18-201ENST00000438801 DHX36Q9H2U1 1008 aaKnown RBP3.46□□□□□ -1.86
HMGB1P18-201ENST00000438801 HIPK2Q9H2X6 1198 aa3.46□□□□□ -1.86
HMGB1P18-201ENST00000438801 USP29Q9HBJ7 922 aa3.46□□□□□ -1.86
HMGB1P18-201ENST00000438801 PRDM11Q9NQV5 511 aa3.46□□□□□ -1.86
HMGB1P18-201ENST00000438801 ZBTB40Q9NUA8 1239 aa3.46□□□□□ -1.86
HMGB1P18-201ENST00000438801 FZD4Q9ULV1 537 aa3.46□□□□□ -1.86
HMGB1P18-201ENST00000438801 ADAMTSL1Q8N6G6 1762 aa3.46□□□□□ -1.86
HMGB1P18-201ENST00000438801 CLIP1P30622 1438 aa3.45□□□□□ -1.86
HMGB1P18-201ENST00000438801 CACNA1HO95180 2353 aa3.45□□□□□ -1.86
HMGB1P18-201ENST00000438801 XRN1Q8IZH2 1706 aaKnown RBP3.45□□□□□ -1.86
HMGB1P18-201ENST00000438801 ENO4A6NNW6 628 aa3.45□□□□□ -1.86
HMGB1P18-201ENST00000438801 RAB27BO00194 218 aa3.45□□□□□ -1.86
HMGB1P18-201ENST00000438801 RFPL1O75677 317 aa3.45□□□□□ -1.86
HMGB1P18-201ENST00000438801 CD63P08962 238 aa3.45□□□□□ -1.86
HMGB1P18-201ENST00000438801 BRAFP15056 766 aa3.45□□□□□ -1.86
HMGB1P18-201ENST00000438801 ZKSCAN1P17029 563 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P18-201ENST00000438801 ADRA1DP25100 572 aa3.45□□□□□ -1.86
HMGB1P18-201ENST00000438801 CPT1AP50416 773 aa3.45□□□□□ -1.86
HMGB1P18-201ENST00000438801 GPC5P78333 572 aa3.45□□□□□ -1.86
HMGB1P18-201ENST00000438801 SLC29A2Q14542 456 aa3.45□□□□□ -1.86
HMGB1P18-201ENST00000438801 FAM110CQ1W6H9 321 aa3.45□□□□□ -1.86
HMGB1P18-201ENST00000438801 C3orf38Q5JPI3 329 aa3.45□□□□□ -1.86
HMGB1P18-201ENST00000438801 DAB2IPQ5VWQ8 1189 aa3.45□□□□□ -1.86
HMGB1P18-201ENST00000438801 ZNF549Q6P9A3 640 aa3.45□□□□□ -1.86
HMGB1P18-201ENST00000438801 USP49Q70CQ1 688 aa3.45□□□□□ -1.86
HMGB1P18-201ENST00000438801 C11orf44Q8N8P7 122 aa3.45□□□□□ -1.86
HMGB1P18-201ENST00000438801 SMCR8Q8TEV9 937 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P18-201ENST00000438801 WIPF2Q8TF74 440 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P18-201ENST00000438801 VPS50Q96JG6 964 aa3.45□□□□□ -1.86
HMGB1P18-201ENST00000438801 ZNF668Q96K58 619 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P18-201ENST00000438801 CDH19Q9H159 772 aa3.45□□□□□ -1.86
HMGB1P18-201ENST00000438801 TMEM60Q9H2L4 133 aa3.45□□□□□ -1.86
HMGB1P18-201ENST00000438801 TYW1Q9NV66 732 aaKnown RBP3.45□□□□□ -1.86
HMGB1P18-201ENST00000438801 STEAP1Q9UHE8 339 aa3.45□□□□□ -1.86
HMGB1P18-201ENST00000438801 TRIM17Q9Y577 477 aa3.45□□□□□ -1.86
HMGB1P18-201ENST00000438801 CTTNBP2Q8WZ74 1663 aa3.45□□□□□ -1.86
HMGB1P18-201ENST00000438801 BTAF1O14981 1849 aa3.44□□□□□ -1.86
HMGB1P18-201ENST00000438801 COL4A6Q14031 1691 aa3.44□□□□□ -1.86
HMGB1P18-201ENST00000438801 NHSQ6T4R5 1651 aa3.44□□□□□ -1.86
HMGB1P18-201ENST00000438801 DHX29Q7Z478 1369 aaKnown RBP3.44□□□□□ -1.86
HMGB1P18-201ENST00000438801 KIAA0232Q92628 1395 aa3.44□□□□□ -1.86
HMGB1P18-201ENST00000438801 AQP7P3A6NL99 342 aa3.44□□□□□ -1.86
HMGB1P18-201ENST00000438801 ISM1B1AKI9 464 aa3.44□□□□□ -1.86
HMGB1P18-201ENST00000438801 PI4K2BG5E9Z4 385 aa3.44□□□□□ -1.86
HMGB1P18-201ENST00000438801 INPPL1O15357 1258 aa3.44□□□□□ -1.86
HMGB1P18-201ENST00000438801 PRAMEF2O60811 474 aa3.44□□□□□ -1.86
HMGB1P18-201ENST00000438801 ACVR2AP27037 513 aa3.44□□□□□ -1.86
HMGB1P18-201ENST00000438801 NTSR1P30989 418 aa3.44□□□□□ -1.86
HMGB1P18-201ENST00000438801 CDKN2AP42771 156 aaKnown RBP3.44□□□□□ -1.86
HMGB1P18-201ENST00000438801 TXNL4AP83876 142 aaKnown RBP3.44□□□□□ -1.86
HMGB1P18-201ENST00000438801 KPNB1Q14974 876 aaKnown RBP3.44□□□□□ -1.86
HMGB1P18-201ENST00000438801 CNN3Q15417 329 aaKnown RBP3.44□□□□□ -1.86
HMGB1P18-201ENST00000438801 EARS2Q5JPH6 523 aaKnown RBP3.44□□□□□ -1.86
HMGB1P18-201ENST00000438801 KRTAP5-11Q6L8G4 156 aa3.44□□□□□ -1.86
HMGB1P18-201ENST00000438801 APOA5Q6Q788 366 aa3.44□□□□□ -1.86
HMGB1P18-201ENST00000438801 ZNF793Q6ZN11 406 aa3.44□□□□□ -1.86
HMGB1P18-201ENST00000438801 KIAA0319LQ8IZA0 1049 aa3.44□□□□□ -1.86
HMGB1P18-201ENST00000438801 FAM71DQ8N9W8 422 aa3.44□□□□□ -1.86
HMGB1P18-201ENST00000438801 PRSS33Q8NF86 280 aa3.44□□□□□ -1.86
HMGB1P18-201ENST00000438801 THOC3Q96J01 351 aaKnown RBP3.44□□□□□ -1.86
HMGB1P18-201ENST00000438801 CAMK1GQ96NX5 476 aa3.44□□□□□ -1.86
HMGB1P18-201ENST00000438801 HIST1H2AAQ96QV6 131 aa3.44□□□□□ -1.86
HMGB1P18-201ENST00000438801 NUAK2Q9H093 628 aa3.44□□□□□ -1.86
HMGB1P18-201ENST00000438801 FAM83DQ9H4H8 585 aa3.44□□□□□ -1.86
HMGB1P18-201ENST00000438801 DDX56Q9NY93 547 aaKnown RBP3.44□□□□□ -1.86
HMGB1P18-201ENST00000438801 AFF4Q9UHB7 1163 aaKnown RBP3.44□□□□□ -1.86
HMGB1P18-201ENST00000438801 MID2Q9UJV3 735 aa3.44□□□□□ -1.86
HMGB1P18-201ENST00000438801 TPCN1Q9ULQ1 816 aa3.44□□□□□ -1.86
HMGB1P18-201ENST00000438801 TTC3P53804 2025 aa3.44□□□□□ -1.86
HMGB1P18-201ENST00000438801 TLN1Q9Y490 2541 aaKnown RBP3.43□□□□□ -1.86
HMGB1P18-201ENST00000438801 ARHGEF10O15013 1369 aa3.43□□□□□ -1.86
HMGB1P18-201ENST00000438801 RELNP78509 3460 aa3.43□□□□□ -1.86
HMGB1P18-201ENST00000438801 IGLV5-39A0A0G2JS06 123 aa3.43□□□□□ -1.86
HMGB1P18-201ENST00000438801 CFAP69A5D8W1 941 aa3.43□□□□□ -1.86
HMGB1P18-201ENST00000438801 C2CD4BA6NLJ0 364 aa3.43□□□□□ -1.86
HMGB1P18-201ENST00000438801 FAM227AF5H4B4 570 aa3.43□□□□□ -1.86
HMGB1P18-201ENST00000438801 RRHO14718 337 aa3.43□□□□□ -1.86
HMGB1P18-201ENST00000438801 FRS3O43559 492 aa3.43□□□□□ -1.86
HMGB1P18-201ENST00000438801 SNX2O60749 519 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms