RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 FAXCQ5TGI0 409 aa3.82□□□□□ -1.8
HMGB3P12-201ENST00000438745 ANO1Q5XXA6 986 aa3.82□□□□□ -1.8
HMGB3P12-201ENST00000438745 AWAT2Q6E213 333 aa3.82□□□□□ -1.8
HMGB3P12-201ENST00000438745 PGBD2Q6P3X8 592 aa3.82□□□□□ -1.8
HMGB3P12-201ENST00000438745 TLDC1Q6P9B6 456 aa3.82□□□□□ -1.8
HMGB3P12-201ENST00000438745 BHLHA9Q7RTU4 235 aa3.82□□□□□ -1.8
HMGB3P12-201ENST00000438745 IRF2BP2Q7Z5L9 587 aa3.82□□□□□ -1.8
HMGB3P12-201ENST00000438745 CCDC28AQ8IWP9 274 aa3.82□□□□□ -1.8
HMGB3P12-201ENST00000438745 EXOC8Q8IYI6 725 aa3.82□□□□□ -1.8
HMGB3P12-201ENST00000438745 NANOGP1Q8N7R0 232 aa3.82□□□□□ -1.8
HMGB3P12-201ENST00000438745 ATG16L2Q8NAA4 619 aa3.82□□□□□ -1.8
HMGB3P12-201ENST00000438745 TM2D2Q9BX73 214 aa3.82□□□□□ -1.8
HMGB3P12-201ENST00000438745 ADGRE3Q9BY15 652 aa3.82□□□□□ -1.8
HMGB3P12-201ENST00000438745 STK33Q9BYT3 514 aa3.82□□□□□ -1.8
HMGB3P12-201ENST00000438745 EPS8L2Q9H6S3 715 aa3.82□□□□□ -1.8
HMGB3P12-201ENST00000438745 OBP2BQ9NPH6 170 aa3.82□□□□□ -1.8
HMGB3P12-201ENST00000438745 TMOD4Q9NZQ9 345 aa3.82□□□□□ -1.8
HMGB3P12-201ENST00000438745 LRFN1Q9P244 771 aa3.82□□□□□ -1.8
HMGB3P12-201ENST00000438745 KDM5AP29375 1690 aaKnown RBP3.81□□□□□ -1.8
HMGB3P12-201ENST00000438745 CTTNBP2Q8WZ74 1663 aa3.81□□□□□ -1.8
HMGB3P12-201ENST00000438745 NCOA2Q15596 1464 aa3.81□□□□□ -1.8
HMGB3P12-201ENST00000438745 LGALS16A8MUM7 142 aa3.81□□□□□ -1.8
HMGB3P12-201ENST00000438745 ADAM10O14672 748 aa3.81□□□□□ -1.8
HMGB3P12-201ENST00000438745 RRHO14718 337 aa3.81□□□□□ -1.8
HMGB3P12-201ENST00000438745 DHHO43323 396 aa3.81□□□□□ -1.8
HMGB3P12-201ENST00000438745 TCEA3O75764 348 aa3.81□□□□□ -1.8
HMGB3P12-201ENST00000438745 RNF8O76064 485 aa3.81□□□□□ -1.8
HMGB3P12-201ENST00000438745 TNFRSF6BO95407 300 aa3.81□□□□□ -1.8
HMGB3P12-201ENST00000438745 NTN1O95631 604 aa3.81□□□□□ -1.8
HMGB3P12-201ENST00000438745 BMP15O95972 392 aa3.81□□□□□ -1.8
HMGB3P12-201ENST00000438745 TMEM191BP0C7N4 346 aa3.81□□□□□ -1.8
HMGB3P12-201ENST00000438745 MST1P26927 711 aa3.81□□□□□ -1.8
HMGB3P12-201ENST00000438745 TACR3P29371 465 aa3.81□□□□□ -1.8
HMGB3P12-201ENST00000438745 FOXG1P55316 489 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P12-201ENST00000438745 RPS13P62277 151 aaKnown RBP3.81□□□□□ -1.8
HMGB3P12-201ENST00000438745 ID2Q02363 134 aa3.81□□□□□ -1.8
HMGB3P12-201ENST00000438745 ICA1Q05084 483 aa3.81□□□□□ -1.8
HMGB3P12-201ENST00000438745 GPS1Q13098 491 aa3.81□□□□□ -1.8
HMGB3P12-201ENST00000438745 ATP1A4Q13733 1029 aa3.81□□□□□ -1.8
HMGB3P12-201ENST00000438745 TRIM71Q2Q1W2 868 aaKnown RBP3.81□□□□□ -1.8
HMGB3P12-201ENST00000438745 CCDC38Q502W7 563 aa3.81□□□□□ -1.8
HMGB3P12-201ENST00000438745 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.81□□□□□ -1.8
HMGB3P12-201ENST00000438745 MRNIPQ6NTE8 343 aa3.81□□□□□ -1.8
HMGB3P12-201ENST00000438745 ERAP2Q6P179 960 aa3.81□□□□□ -1.8
HMGB3P12-201ENST00000438745 SHC4Q6S5L8 630 aa3.81□□□□□ -1.8
HMGB3P12-201ENST00000438745 TFAP2DQ7Z6R9 452 aa3.81□□□□□ -1.8
HMGB3P12-201ENST00000438745 CLASRPQ8N2M8 674 aaKnown RBP3.81□□□□□ -1.8
HMGB3P12-201ENST00000438745 STYXQ8WUJ0 223 aa3.81□□□□□ -1.8
HMGB3P12-201ENST00000438745 OVCA2Q8WZ82 227 aa3.81□□□□□ -1.8
HMGB3P12-201ENST00000438745 CUL5Q93034 780 aa3.81□□□□□ -1.8
HMGB3P12-201ENST00000438745 GRAMD1AQ96CP6 724 aa3.81□□□□□ -1.8
HMGB3P12-201ENST00000438745 ZFYVE19Q96K21 471 aa3.81□□□□□ -1.8
HMGB3P12-201ENST00000438745 SYT17Q9BSW7 474 aa3.81□□□□□ -1.8
HMGB3P12-201ENST00000438745 EIF2AQ9BY44 585 aaKnown RBP3.81□□□□□ -1.8
HMGB3P12-201ENST00000438745 NUAK2Q9H093 628 aa3.81□□□□□ -1.8
HMGB3P12-201ENST00000438745 ABHD10Q9NUJ1 306 aa3.81□□□□□ -1.8
HMGB3P12-201ENST00000438745 TMEM184CQ9NVA4 438 aa3.81□□□□□ -1.8
HMGB3P12-201ENST00000438745 IGSF9Q9P2J2 1179 aa3.81□□□□□ -1.8
HMGB3P12-201ENST00000438745 RIPOR2Q9Y4F9 1068 aa3.81□□□□□ -1.8
HMGB3P12-201ENST00000438745 KIDINS220Q9ULH0 1771 aa3.81□□□□□ -1.8
HMGB3P12-201ENST00000438745 EP400Q96L91 3159 aa3.81□□□□□ -1.8
HMGB3P12-201ENST00000438745 TTC3P53804 2025 aa3.8□□□□□ -1.8
HMGB3P12-201ENST00000438745 ATP10DQ9P241 1426 aa3.8□□□□□ -1.8
HMGB3P12-201ENST00000438745 SPATA31A5Q5VU36 1347 aa3.8□□□□□ -1.8
HMGB3P12-201ENST00000438745 SPATA31A7Q8IWB4 1347 aa3.8□□□□□ -1.8
HMGB3P12-201ENST00000438745 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P12-201ENST00000438745 IFRD1O00458 451 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P12-201ENST00000438745 HNRNPDLO14979 420 aaKnown RBP3.8□□□□□ -1.8
HMGB3P12-201ENST00000438745 CCNT2O60583 730 aaKnown RBP3.8□□□□□ -1.8
HMGB3P12-201ENST00000438745 SKAP2O75563 359 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P12-201ENST00000438745 SRGAP2BP0DMP2 458 aa3.8□□□□□ -1.8
HMGB3P12-201ENST00000438745 EGR1P18146 543 aa3.8□□□□□ -1.8
HMGB3P12-201ENST00000438745 PDIA3P30101 505 aaKnown RBP3.8□□□□□ -1.8
HMGB3P12-201ENST00000438745 HOXD12P35452 270 aa3.8□□□□□ -1.8
HMGB3P12-201ENST00000438745 IDUAP35475 653 aa3.8□□□□□ -1.8
HMGB3P12-201ENST00000438745 ZNF84P51523 738 aa3.8□□□□□ -1.8
HMGB3P12-201ENST00000438745 WDR5P61964 334 aaKnown RBP3.8□□□□□ -1.8
HMGB3P12-201ENST00000438745 YPEL5P62699 121 aa3.8□□□□□ -1.8
HMGB3P12-201ENST00000438745 ZNF91Q05481 1191 aa3.8□□□□□ -1.8
HMGB3P12-201ENST00000438745 GAB1Q13480 694 aa3.8□□□□□ -1.8
HMGB3P12-201ENST00000438745 PFKFB4Q16877 469 aa3.8□□□□□ -1.8
HMGB3P12-201ENST00000438745 SLC5A9Q2M3M2 681 aa3.8□□□□□ -1.8
HMGB3P12-201ENST00000438745 LEXMQ3ZCV2 418 aa3.8□□□□□ -1.8
HMGB3P12-201ENST00000438745 GORABQ5T7V8 394 aa3.8□□□□□ -1.8
HMGB3P12-201ENST00000438745 UNC5CLQ8IV45 518 aa3.8□□□□□ -1.8
HMGB3P12-201ENST00000438745 C16orf71Q8IYS4 520 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P12-201ENST00000438745 MYCT1Q8N699 235 aa3.8□□□□□ -1.8
HMGB3P12-201ENST00000438745 NRACQ8N912 160 aa3.8□□□□□ -1.8
HMGB3P12-201ENST00000438745 PRPF18Q99633 342 aaKnown RBP3.8□□□□□ -1.8
HMGB3P12-201ENST00000438745 NUDT22Q9BRQ3 303 aa3.8□□□□□ -1.8
HMGB3P12-201ENST00000438745 RNF26Q9BY78 433 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P12-201ENST00000438745 TM7SF3Q9NS93 570 aa3.8□□□□□ -1.8
HMGB3P12-201ENST00000438745 HEY2Q9UBP5 337 aa3.8□□□□□ -1.8
HMGB3P12-201ENST00000438745 ASXL1Q8IXJ9 1541 aa3.8□□□□□ -1.8
HMGB3P12-201ENST00000438745 CLIP1P30622 1438 aa3.79□□□□□ -1.8
HMGB3P12-201ENST00000438745 PARD3Q8TEW0 1356 aa3.79□□□□□ -1.8
HMGB3P12-201ENST00000438745 GOLGA6L3A6NEY3 463 aa3.79□□□□□ -1.8
HMGB3P12-201ENST00000438745 TRIM38O00635 465 aa3.79□□□□□ -1.8
HMGB3P12-201ENST00000438745 PRYO14603 147 aa3.79□□□□□ -1.8
HMGB3P12-201ENST00000438745 ZSCAN9O15535 394 aaPredicted RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms