RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 HCN2Q9UL51 889 aa8.09□□□□□ -1.11
VPS50-204ENST00000438395 KIAA1257Q9ULG3 409 aa8.09□□□□□ -1.11
VPS50-204ENST00000438395 CEP83Q9Y592 693 aa8.09□□□□□ -1.11
VPS50-204ENST00000438395 EML5Q05BV3 1969 aa8.09□□□□□ -1.11
VPS50-204ENST00000438395 M0QYV0 167 aa8.08□□□□□ -1.12
VPS50-204ENST00000438395 SART1O43290 800 aaKnown RBP8.08□□□□□ -1.12
VPS50-204ENST00000438395 MSI1O43347 362 aaKnown RBP8.08□□□□□ -1.12
VPS50-204ENST00000438395 SH3BP5O60239 455 aa8.08□□□□□ -1.12
VPS50-204ENST00000438395 RNASEH1O60930 286 aaKnown RBP8.08□□□□□ -1.12
VPS50-204ENST00000438395 TOP3BO95985 862 aaKnown RBP8.08□□□□□ -1.12
VPS50-204ENST00000438395 DNTTP04053 509 aa8.08□□□□□ -1.12
VPS50-204ENST00000438395 VDRP11473 427 aa8.08□□□□□ -1.12
VPS50-204ENST00000438395 PABPC1P11940 636 aaKnown RBP8.08□□□□□ -1.12
VPS50-204ENST00000438395 LCP1P13796 627 aa8.08□□□□□ -1.12
VPS50-204ENST00000438395 POLR2EP19388 210 aaKnown RBP8.08□□□□□ -1.12
VPS50-204ENST00000438395 MAOBP27338 520 aa8.08□□□□□ -1.12
VPS50-204ENST00000438395 HOXD9P28356 352 aaPredicted RBP8.08□□□□□ -1.12
VPS50-204ENST00000438395 PPP1R2P41236 205 aa8.08□□□□□ -1.12
VPS50-204ENST00000438395 MATKP42679 507 aa8.08□□□□□ -1.12
VPS50-204ENST00000438395 PRCPP42785 496 aa8.08□□□□□ -1.12
VPS50-204ENST00000438395 AFF3P51826 1226 aaKnown RBP8.08□□□□□ -1.12
VPS50-204ENST00000438395 SFSWAPQ12872 951 aaKnown RBP8.08□□□□□ -1.12
VPS50-204ENST00000438395 CDH18Q13634 790 aa8.08□□□□□ -1.12
VPS50-204ENST00000438395 BECN1Q14457 450 aa8.08□□□□□ -1.12
VPS50-204ENST00000438395 STILQ15468 1287 aa8.08□□□□□ -1.12
VPS50-204ENST00000438395 TRIP4Q15650 581 aaPredicted RBP8.08□□□□□ -1.12
VPS50-204ENST00000438395 INAVAQ3KP66 663 aa8.08□□□□□ -1.12
VPS50-204ENST00000438395 CBWD6Q4V339 395 aa8.08□□□□□ -1.12
VPS50-204ENST00000438395 CBWD3Q5JTY5 395 aa8.08□□□□□ -1.12
VPS50-204ENST00000438395 CBWD5Q5RIA9 395 aa8.08□□□□□ -1.12
VPS50-204ENST00000438395 ADGRF1Q5T601 910 aa8.08□□□□□ -1.12
VPS50-204ENST00000438395 ZNF658Q5TYW1 1059 aaPredicted RBP8.08□□□□□ -1.12
VPS50-204ENST00000438395 DCAF12L1Q5VU92 463 aa8.08□□□□□ -1.12
VPS50-204ENST00000438395 RNF219Q5W0B1 726 aaPredicted RBP8.08□□□□□ -1.12
VPS50-204ENST00000438395 PM20D1Q6GTS8 502 aa8.08□□□□□ -1.12
VPS50-204ENST00000438395 TMEM270Q6UE05 265 aa8.08□□□□□ -1.12
VPS50-204ENST00000438395 LRSAM1Q6UWE0 723 aa8.08□□□□□ -1.12
VPS50-204ENST00000438395 CHST9Q7L1S5 443 aa8.08□□□□□ -1.12
VPS50-204ENST00000438395 ADAT2Q7Z6V5 191 aaKnown RBP8.08□□□□□ -1.12
VPS50-204ENST00000438395 UNC45BQ8IWX7 931 aa8.08□□□□□ -1.12
VPS50-204ENST00000438395 PPM1KQ8N3J5 372 aa8.08□□□□□ -1.12
VPS50-204ENST00000438395 CHCHD4Q8N4Q1 142 aa8.08□□□□□ -1.12
VPS50-204ENST00000438395 HJURPQ8NCD3 748 aaPredicted RBP8.08□□□□□ -1.12
VPS50-204ENST00000438395 OR2T3Q8NH03 318 aa8.08□□□□□ -1.12
VPS50-204ENST00000438395 UBA3Q8TBC4 463 aa8.08□□□□□ -1.12
VPS50-204ENST00000438395 SORCS1Q8WY21 1168 aa8.08□□□□□ -1.12
VPS50-204ENST00000438395 DNASE2BQ8WZ79 361 aa8.08□□□□□ -1.12
VPS50-204ENST00000438395 PIWIL1Q96J94 861 aaKnown RBP8.08□□□□□ -1.12
VPS50-204ENST00000438395 TRIM62Q9BVG3 475 aa8.08□□□□□ -1.12
VPS50-204ENST00000438395 CD248Q9HCU0 757 aa8.08□□□□□ -1.12
VPS50-204ENST00000438395 CD93Q9NPY3 652 aa8.08□□□□□ -1.12
VPS50-204ENST00000438395 CNGB3Q9NQW8 809 aa8.08□□□□□ -1.12
VPS50-204ENST00000438395 ITM2CQ9NQX7 267 aa8.08□□□□□ -1.12
VPS50-204ENST00000438395 WSB2Q9NYS7 404 aaPredicted RBP8.08□□□□□ -1.12
VPS50-204ENST00000438395 EIF2B4Q9UI10 523 aaKnown RBP8.08□□□□□ -1.12
VPS50-204ENST00000438395 GGA2Q9UJY4 613 aa8.08□□□□□ -1.12
VPS50-204ENST00000438395 KLK13Q9UKR3 277 aa8.08□□□□□ -1.12
VPS50-204ENST00000438395 MSRB2Q9Y3D2 182 aa8.08□□□□□ -1.12
VPS50-204ENST00000438395 PCDHB4Q9Y5E5 795 aa8.08□□□□□ -1.12
VPS50-204ENST00000438395 MYO16Q9Y6X6 1858 aa8.08□□□□□ -1.12
VPS50-204ENST00000438395 NUP205Q92621 2012 aa8.08□□□□□ -1.12
VPS50-204ENST00000438395 ZZEF1O43149 2961 aa8.07□□□□□ -1.12
VPS50-204ENST00000438395 DSPP15924 2871 aaKnown RBP8.07□□□□□ -1.12
VPS50-204ENST00000438395 YJEFN3A6XGL0 299 aa8.07□□□□□ -1.12
VPS50-204ENST00000438395 E7ENQ6 273 aa8.07□□□□□ -1.12
VPS50-204ENST00000438395 TULP2O00295 520 aa8.07□□□□□ -1.12
VPS50-204ENST00000438395 O00370 1275 aa8.07□□□□□ -1.12
VPS50-204ENST00000438395 IRAK2O43187 625 aa8.07□□□□□ -1.12
VPS50-204ENST00000438395 FBXO21O94952 628 aa8.07□□□□□ -1.12
VPS50-204ENST00000438395 FSBPO95073 299 aa8.07□□□□□ -1.12
VPS50-204ENST00000438395 MOCS3O95396 460 aa8.07□□□□□ -1.12
VPS50-204ENST00000438395 PAEPP09466 180 aa8.07□□□□□ -1.12
VPS50-204ENST00000438395 DLDP09622 509 aaKnown RBP8.07□□□□□ -1.12
VPS50-204ENST00000438395 FTH1P19P0C7X4 201 aa8.07□□□□□ -1.12
VPS50-204ENST00000438395 HLA-EP13747 358 aa8.07□□□□□ -1.12
VPS50-204ENST00000438395 CD59P13987 128 aa8.07□□□□□ -1.12
VPS50-204ENST00000438395 RGS7P49802 495 aa8.07□□□□□ -1.12
VPS50-204ENST00000438395 TBX4P57082 545 aa8.07□□□□□ -1.12
VPS50-204ENST00000438395 NUCB2P80303 420 aa8.07□□□□□ -1.12
VPS50-204ENST00000438395 ZBTB16Q05516 673 aa8.07□□□□□ -1.12
VPS50-204ENST00000438395 CAMK2GQ13555 558 aaPredicted RBP8.07□□□□□ -1.12
VPS50-204ENST00000438395 ENPP2Q13822 863 aa8.07□□□□□ -1.12
VPS50-204ENST00000438395 SUZ12Q15022 739 aaKnown RBP8.07□□□□□ -1.12
VPS50-204ENST00000438395 MBLAC2Q68D91 279 aa8.07□□□□□ -1.12
VPS50-204ENST00000438395 ZNF776Q68DI1 518 aaPredicted RBP8.07□□□□□ -1.12
VPS50-204ENST00000438395 KLHL10Q6JEL2 608 aa8.07□□□□□ -1.12
VPS50-204ENST00000438395 LCLAT1Q6UWP7 414 aa8.07□□□□□ -1.12
VPS50-204ENST00000438395 MFN1Q8IWA4 741 aa8.07□□□□□ -1.12
VPS50-204ENST00000438395 FAM217AQ8IXS0 508 aa8.07□□□□□ -1.12
VPS50-204ENST00000438395 CYB5D2Q8WUJ1 264 aa8.07□□□□□ -1.12
VPS50-204ENST00000438395 KCTD13Q8WZ19 329 aa8.07□□□□□ -1.12
VPS50-204ENST00000438395 IRGQQ8WZA9 623 aa8.07□□□□□ -1.12
VPS50-204ENST00000438395 NDRG1Q92597 394 aaKnown RBP8.07□□□□□ -1.12
VPS50-204ENST00000438395 GATA6Q92908 595 aa8.07□□□□□ -1.12
VPS50-204ENST00000438395 SKA1Q96BD8 255 aa8.07□□□□□ -1.12
VPS50-204ENST00000438395 FAM149B1Q96BN6 582 aa8.07□□□□□ -1.12
VPS50-204ENST00000438395 CEP63Q96MT8 703 aa8.07□□□□□ -1.12
VPS50-204ENST00000438395 CAMK1GQ96NX5 476 aa8.07□□□□□ -1.12
VPS50-204ENST00000438395 CDC6Q99741 560 aa8.07□□□□□ -1.12
VPS50-204ENST00000438395 BTBD1Q9H0C5 482 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms