RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 SEMA4DQ92854 862 aa15.4■□□□□ 0.06
HDAC8-213ENST00000436675 MYO19Q96H55 970 aa15.4■□□□□ 0.06
HDAC8-213ENST00000436675 SERAC1Q96JX3 654 aa15.4■□□□□ 0.06
HDAC8-213ENST00000436675 IPO9Q96P70 1041 aaKnown RBP15.4■□□□□ 0.06
HDAC8-213ENST00000436675 LRRC4Q9HBW1 653 aa15.4■□□□□ 0.06
HDAC8-213ENST00000436675 TEX51A0A1B0GUA7 166 aa15.39■□□□□ 0.05
HDAC8-213ENST00000436675 YJEFN3A6XGL0 299 aa15.39■□□□□ 0.05
HDAC8-213ENST00000436675 TTC34A8MYJ7 566 aa15.39■□□□□ 0.05
HDAC8-213ENST00000436675 E7ENQ6 273 aa15.39■□□□□ 0.05
HDAC8-213ENST00000436675 PYCARD-AS1I3L0S3 204 aa15.39■□□□□ 0.05
HDAC8-213ENST00000436675 J3QKU1 62 aa15.39■□□□□ 0.05
HDAC8-213ENST00000436675 SLC6A4P31645 630 aa15.39■□□□□ 0.05
HDAC8-213ENST00000436675 SLC8A1P32418 973 aa15.39■□□□□ 0.05
HDAC8-213ENST00000436675 CSKP41240 450 aa15.39■□□□□ 0.05
HDAC8-213ENST00000436675 CTSOP43234 321 aaPredicted RBP15.39■□□□□ 0.05
HDAC8-213ENST00000436675 ME1P48163 572 aa15.39■□□□□ 0.05
HDAC8-213ENST00000436675 ARRB1P49407 418 aaPredicted RBP15.39■□□□□ 0.05
HDAC8-213ENST00000436675 NUMBP49757 651 aa15.39■□□□□ 0.05
HDAC8-213ENST00000436675 ZNF445P59923 1031 aa15.39■□□□□ 0.05
HDAC8-213ENST00000436675 TLE3Q04726 772 aa15.39■□□□□ 0.05
HDAC8-213ENST00000436675 HNRNPA1L2Q32P51 320 aaKnown RBP15.39■□□□□ 0.05
HDAC8-213ENST00000436675 TAF1BQ53T94 588 aaPredicted RBP15.39■□□□□ 0.05
HDAC8-213ENST00000436675 PIK3R6Q5UE93 754 aa15.39■□□□□ 0.05
HDAC8-213ENST00000436675 ARHGAP17Q68EM7 881 aa15.39■□□□□ 0.05
HDAC8-213ENST00000436675 KDM7AQ6ZMT4 941 aa15.39■□□□□ 0.05
HDAC8-213ENST00000436675 MMS22LQ6ZRQ5 1243 aa15.39■□□□□ 0.05
HDAC8-213ENST00000436675 MFN1Q8IWA4 741 aa15.39■□□□□ 0.05
HDAC8-213ENST00000436675 FAM186BQ8IYM0 893 aa15.39■□□□□ 0.05
HDAC8-213ENST00000436675 CARNMT1Q8N4J0 409 aa15.39■□□□□ 0.05
HDAC8-213ENST00000436675 LSM14AQ8ND56 463 aaKnown RBP15.39■□□□□ 0.05
HDAC8-213ENST00000436675 OR2T34Q8NGX1 318 aa15.39■□□□□ 0.05
HDAC8-213ENST00000436675 OR14C36Q8NHC7 312 aa15.39■□□□□ 0.05
HDAC8-213ENST00000436675 UBA3Q8TBC4 463 aa15.39■□□□□ 0.05
HDAC8-213ENST00000436675 PAGE5Q96GU1 130 aa15.39■□□□□ 0.05
HDAC8-213ENST00000436675 STOML2Q9UJZ1 356 aa15.39■□□□□ 0.05
HDAC8-213ENST00000436675 SCML1Q9UN30 329 aa15.39■□□□□ 0.05
HDAC8-213ENST00000436675 PCDHA7Q9UN72 937 aa15.39■□□□□ 0.05
HDAC8-213ENST00000436675 TLR4O00206 839 aa15.38■□□□□ 0.05
HDAC8-213ENST00000436675 PIK3R2O00459 728 aa15.38■□□□□ 0.05
HDAC8-213ENST00000436675 SDC3O75056 442 aa15.38■□□□□ 0.05
HDAC8-213ENST00000436675 SLFN14P0C7P3 912 aa15.38■□□□□ 0.05
HDAC8-213ENST00000436675 LCP1P13796 627 aa15.38■□□□□ 0.05
HDAC8-213ENST00000436675 NR2F2P24468 414 aa15.38■□□□□ 0.05
HDAC8-213ENST00000436675 ACTN2P35609 894 aa15.38■□□□□ 0.05
HDAC8-213ENST00000436675 NXPH1P58417 271 aa15.38■□□□□ 0.05
HDAC8-213ENST00000436675 PPP2CBP62714 309 aa15.38■□□□□ 0.05
HDAC8-213ENST00000436675 PPP2CAP67775 309 aa15.38■□□□□ 0.05
HDAC8-213ENST00000436675 C9orf64Q5T6V5 341 aa15.38■□□□□ 0.05
HDAC8-213ENST00000436675 RESP18Q5W5W9 173 aa15.38■□□□□ 0.05
HDAC8-213ENST00000436675 INTS8Q75QN2 995 aaKnown RBP15.38■□□□□ 0.05
HDAC8-213ENST00000436675 SPATS2Q86XZ4 545 aaKnown RBP15.38■□□□□ 0.05
HDAC8-213ENST00000436675 SIX6OS1Q8N1H7 587 aa15.38■□□□□ 0.05
HDAC8-213ENST00000436675 AADATQ8N5Z0 425 aa15.38■□□□□ 0.05
HDAC8-213ENST00000436675 TMEM174Q8WUU8 243 aa15.38■□□□□ 0.05
HDAC8-213ENST00000436675 MYEOVQ96EZ4 313 aa15.38■□□□□ 0.05
HDAC8-213ENST00000436675 MRGPRX3Q96LB0 322 aa15.38■□□□□ 0.05
HDAC8-213ENST00000436675 LGMNQ99538 433 aa15.38■□□□□ 0.05
HDAC8-213ENST00000436675 TSPAN16Q9UKR8 245 aa15.38■□□□□ 0.05
HDAC8-213ENST00000436675 INTS6Q9UL03 887 aaKnown RBP15.38■□□□□ 0.05
HDAC8-213ENST00000436675 CLCA2Q9UQC9 943 aa15.38■□□□□ 0.05
HDAC8-213ENST00000436675 MAPK8IP1Q9UQF2 711 aa15.38■□□□□ 0.05
HDAC8-213ENST00000436675 TBC1D3DA0A087WVF3 549 aa15.37■□□□□ 0.05
HDAC8-213ENST00000436675 TBC1D3IA0A087WXS9 549 aa15.37■□□□□ 0.05
HDAC8-213ENST00000436675 TBC1D3EA0A087X179 549 aa15.37■□□□□ 0.05
HDAC8-213ENST00000436675 TBC1D3KA0A087X1G2 549 aa15.37■□□□□ 0.05
HDAC8-213ENST00000436675 TBC1D3FA6NER0 549 aaPredicted RBP15.37■□□□□ 0.05
HDAC8-213ENST00000436675 TBC1D3LB9A6J9 549 aa15.37■□□□□ 0.05
HDAC8-213ENST00000436675 XPO1O14980 1071 aaKnown RBP15.37■□□□□ 0.05
HDAC8-213ENST00000436675 YKT6O15498 198 aa15.37■□□□□ 0.05
HDAC8-213ENST00000436675 LATS1O95835 1130 aa15.37■□□□□ 0.05
HDAC8-213ENST00000436675 TBC1D3HP0C7X1 549 aa15.37■□□□□ 0.05
HDAC8-213ENST00000436675 CD19P15391 556 aa15.37■□□□□ 0.05
HDAC8-213ENST00000436675 CKMT2P17540 419 aa15.37■□□□□ 0.05
HDAC8-213ENST00000436675 MAT2AP31153 395 aaKnown RBP15.37■□□□□ 0.05
HDAC8-213ENST00000436675 CCR5P51681 352 aa15.37■□□□□ 0.05
HDAC8-213ENST00000436675 RPS24P62847 133 aaKnown RBP15.37■□□□□ 0.05
HDAC8-213ENST00000436675 INSM1Q01101 510 aaPredicted RBP15.37■□□□□ 0.05
HDAC8-213ENST00000436675 KCNH2Q12809 1159 aa15.37■□□□□ 0.05
HDAC8-213ENST00000436675 SFSWAPQ12872 951 aaKnown RBP15.37■□□□□ 0.05
HDAC8-213ENST00000436675 TBC1D25Q3MII6 688 aa15.37■□□□□ 0.05
HDAC8-213ENST00000436675 FAM133BQ5BKY9 247 aaKnown RBP15.37■□□□□ 0.05
HDAC8-213ENST00000436675 TBC1D3GQ6DHY5 549 aa15.37■□□□□ 0.05
HDAC8-213ENST00000436675 TBC1D3CQ6IPX1 549 aa15.37■□□□□ 0.05
HDAC8-213ENST00000436675 ERICH1Q86X53 443 aa15.37■□□□□ 0.05
HDAC8-213ENST00000436675 TBC1D3Q8IZP1 549 aaPredicted RBP15.37■□□□□ 0.05
HDAC8-213ENST00000436675 STK40Q8N2I9 435 aa15.37■□□□□ 0.05
HDAC8-213ENST00000436675 TTC17Q96AE7 1141 aa15.37■□□□□ 0.05
HDAC8-213ENST00000436675 LMLNQ96KR4 655 aa15.37■□□□□ 0.05
HDAC8-213ENST00000436675 TMEM8AQ9HCN3 771 aa15.37■□□□□ 0.05
HDAC8-213ENST00000436675 ABCC13Q9NSE7 274 aa15.37■□□□□ 0.05
HDAC8-213ENST00000436675 ERVW-1Q9UQF0 538 aa15.37■□□□□ 0.05
HDAC8-213ENST00000436675 CEP83Q9Y592 693 aa15.37■□□□□ 0.05
HDAC8-213ENST00000436675 MAPK13O15264 365 aa15.36■□□□□ 0.05
HDAC8-213ENST00000436675 ACTN4O43707 911 aaKnown RBP15.36■□□□□ 0.05
HDAC8-213ENST00000436675 ACSL4O60488 711 aa15.36■□□□□ 0.05
HDAC8-213ENST00000436675 SLC11A2P49281 568 aa15.36■□□□□ 0.05
HDAC8-213ENST00000436675 RGS7P49802 495 aa15.36■□□□□ 0.05
HDAC8-213ENST00000436675 ADPRHP54922 357 aa15.36■□□□□ 0.05
HDAC8-213ENST00000436675 BST2Q10589 180 aaKnown RBP15.36■□□□□ 0.05
HDAC8-213ENST00000436675 SLC45A4Q5BKX6 768 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms