RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 LMLNQ96KR4 655 aa18.94■□□□□ 0.62
HMGN1-207ENST00000436324 NAT10Q9H0A0 1025 aaKnown RBP18.94■□□□□ 0.62
HMGN1-207ENST00000436324 KHNYNO15037 678 aaKnown RBP18.93■□□□□ 0.62
HMGN1-207ENST00000436324 NDUFS2O75306 463 aa18.93■□□□□ 0.62
HMGN1-207ENST00000436324 LSM8O95777 96 aaKnown RBP18.93■□□□□ 0.62
HMGN1-207ENST00000436324 CHRNB2P17787 502 aa18.93■□□□□ 0.62
HMGN1-207ENST00000436324 ITPKAP23677 461 aa18.93■□□□□ 0.62
HMGN1-207ENST00000436324 GGCXP38435 758 aa18.93■□□□□ 0.62
HMGN1-207ENST00000436324 CSKP41240 450 aa18.93■□□□□ 0.62
HMGN1-207ENST00000436324 STAT1P42224 750 aa18.93■□□□□ 0.62
HMGN1-207ENST00000436324 MATKP42679 507 aa18.93■□□□□ 0.62
HMGN1-207ENST00000436324 GABRB2P47870 512 aa18.93■□□□□ 0.62
HMGN1-207ENST00000436324 COPAP53621 1224 aa18.93■□□□□ 0.62
HMGN1-207ENST00000436324 NOMO3P69849 1222 aa18.93■□□□□ 0.62
HMGN1-207ENST00000436324 MSANTD4Q8NCY6 345 aa18.93■□□□□ 0.62
HMGN1-207ENST00000436324 PRCCQ92733 491 aaPredicted RBP18.93■□□□□ 0.62
HMGN1-207ENST00000436324 PRMT1Q99873 361 aaKnown RBP18.93■□□□□ 0.62
HMGN1-207ENST00000436324 ADAM33Q9BZ11 813 aa18.93■□□□□ 0.62
HMGN1-207ENST00000436324 TMEM245Q9H330 911 aa18.93■□□□□ 0.62
HMGN1-207ENST00000436324 MTG2Q9H4K7 406 aa18.93■□□□□ 0.62
HMGN1-207ENST00000436324 TMEM74BQ9NUR3 256 aa18.93■□□□□ 0.62
HMGN1-207ENST00000436324 NOCTQ9UK39 431 aaKnown RBP18.93■□□□□ 0.62
HMGN1-207ENST00000436324 INTS6Q9UL03 887 aaKnown RBP18.93■□□□□ 0.62
HMGN1-207ENST00000436324 CEP250Q9BV73 2442 aa18.93■□□□□ 0.62
HMGN1-207ENST00000436324 LRRC10BA6NIK2 292 aa18.92■□□□□ 0.62
HMGN1-207ENST00000436324 ACADMP11310 421 aa18.92■□□□□ 0.62
HMGN1-207ENST00000436324 FMO1Q01740 532 aa18.92■□□□□ 0.62
HMGN1-207ENST00000436324 CDR2Q01850 454 aa18.92■□□□□ 0.62
HMGN1-207ENST00000436324 PITRM1Q5JRX3 1037 aa18.92■□□□□ 0.62
HMGN1-207ENST00000436324 STPG1Q5TH74 334 aa18.92■□□□□ 0.62
HMGN1-207ENST00000436324 OTUD1Q5VV17 481 aaPredicted RBP18.92■□□□□ 0.62
HMGN1-207ENST00000436324 IL31Q6EBC2 164 aa18.92■□□□□ 0.62
HMGN1-207ENST00000436324 APTXQ7Z2E3 356 aaKnown RBP18.92■□□□□ 0.62
HMGN1-207ENST00000436324 ZNF677Q86XU0 584 aa18.92■□□□□ 0.62
HMGN1-207ENST00000436324 TBCBQ99426 244 aa18.92■□□□□ 0.62
HMGN1-207ENST00000436324 NPY6RQ99463 290 aa18.92■□□□□ 0.62
HMGN1-207ENST00000436324 EDEM2Q9BV94 578 aa18.92■□□□□ 0.62
HMGN1-207ENST00000436324 SIK2Q9H0K1 926 aa18.92■□□□□ 0.62
HMGN1-207ENST00000436324 PIGVQ9NUD9 493 aa18.92■□□□□ 0.62
HMGN1-207ENST00000436324 KIAA1522Q9P206 1035 aaPredicted RBP18.92■□□□□ 0.62
HMGN1-207ENST00000436324 STAP1Q9ULZ2 295 aa18.92■□□□□ 0.62
HMGN1-207ENST00000436324 WDR87Q6ZQQ6 2873 aa18.91■□□□□ 0.62
HMGN1-207ENST00000436324 MED19A0JLT2 244 aaPredicted RBP18.91■□□□□ 0.62
HMGN1-207ENST00000436324 PAGE1O75459 146 aa18.91■□□□□ 0.62
HMGN1-207ENST00000436324 ADCY5O95622 1261 aa18.91■□□□□ 0.62
HMGN1-207ENST00000436324 CD6P30203 668 aa18.91■□□□□ 0.62
HMGN1-207ENST00000436324 CTSOP43234 321 aaPredicted RBP18.91■□□□□ 0.62
HMGN1-207ENST00000436324 TPMTP51580 245 aa18.91■□□□□ 0.62
HMGN1-207ENST00000436324 ST8SIA6P61647 398 aa18.91■□□□□ 0.62
HMGN1-207ENST00000436324 IRX4P78413 519 aa18.91■□□□□ 0.62
HMGN1-207ENST00000436324 CENPCQ03188 943 aa18.91■□□□□ 0.62
HMGN1-207ENST00000436324 DEUP1Q05D60 604 aa18.91■□□□□ 0.62
HMGN1-207ENST00000436324 ZNF33AQ06730 810 aa18.91■□□□□ 0.62
HMGN1-207ENST00000436324 CAMK2GQ13555 558 aaPredicted RBP18.91■□□□□ 0.62
HMGN1-207ENST00000436324 AUHQ13825 339 aaKnown RBP18.91■□□□□ 0.62
HMGN1-207ENST00000436324 SPDYCQ5MJ68 293 aa18.91■□□□□ 0.62
HMGN1-207ENST00000436324 RABGAP1LQ5R372 815 aa18.91■□□□□ 0.62
HMGN1-207ENST00000436324 FBXL22Q6P050 247 aa18.91■□□□□ 0.62
HMGN1-207ENST00000436324 SND1Q7KZF4 910 aaKnown RBP eCLIP18.91■□□□□ 0.62
HMGN1-207ENST00000436324 C14orf80Q86SX3 495 aa18.91■□□□□ 0.62
HMGN1-207ENST00000436324 FAM124AQ86V42 546 aa18.91■□□□□ 0.62
HMGN1-207ENST00000436324 SYT12Q8IV01 421 aa18.91■□□□□ 0.62
HMGN1-207ENST00000436324 SLC41A1Q8IVJ1 513 aa18.91■□□□□ 0.62
HMGN1-207ENST00000436324 DHX40Q8IX18 779 aaKnown RBP18.91■□□□□ 0.62
HMGN1-207ENST00000436324 APCDD1Q8J025 514 aa18.91■□□□□ 0.62
HMGN1-207ENST00000436324 CCAR2Q8N163 923 aaKnown RBP18.91■□□□□ 0.62
HMGN1-207ENST00000436324 OR2T3Q8NH03 318 aa18.91■□□□□ 0.62
HMGN1-207ENST00000436324 SLC30A5Q8TAD4 765 aa18.91■□□□□ 0.62
HMGN1-207ENST00000436324 IGSF8Q969P0 613 aa18.91■□□□□ 0.62
HMGN1-207ENST00000436324 TTC17Q96AE7 1141 aa18.91■□□□□ 0.62
HMGN1-207ENST00000436324 TOE1Q96GM8 510 aaKnown RBP18.91■□□□□ 0.62
HMGN1-207ENST00000436324 HSPA12BQ96MM6 686 aa18.91■□□□□ 0.62
HMGN1-207ENST00000436324 RPRD1AQ96P16 312 aaPredicted RBP18.91■□□□□ 0.62
HMGN1-207ENST00000436324 ERGIC2Q96RQ1 377 aa18.91■□□□□ 0.62
HMGN1-207ENST00000436324 PRSS16Q9NQE7 514 aa18.91■□□□□ 0.62
HMGN1-207ENST00000436324 ITM2CQ9NQX7 267 aa18.91■□□□□ 0.62
HMGN1-207ENST00000436324 RRN3Q9NYV6 651 aa18.91■□□□□ 0.62
HMGN1-207ENST00000436324 VANGL2Q9ULK5 521 aa18.91■□□□□ 0.62
HMGN1-207ENST00000436324 SNX10Q9Y5X0 201 aa18.91■□□□□ 0.62
HMGN1-207ENST00000436324 HS3ST4Q9Y661 456 aa18.91■□□□□ 0.62
HMGN1-207ENST00000436324 TEX33O43247 280 aa18.9■□□□□ 0.62
HMGN1-207ENST00000436324 MOCS3O95396 460 aa18.9■□□□□ 0.62
HMGN1-207ENST00000436324 PDGFRAP16234 1089 aa18.9■□□□□ 0.62
HMGN1-207ENST00000436324 FLT3P36888 993 aa18.9■□□□□ 0.62
HMGN1-207ENST00000436324 IRAK1P51617 712 aa18.9■□□□□ 0.62
HMGN1-207ENST00000436324 TRIM61Q5EBN2 209 aa18.9■□□□□ 0.62
HMGN1-207ENST00000436324 METTL3Q86U44 580 aaKnown RBP18.9■□□□□ 0.62
HMGN1-207ENST00000436324 RGL4Q8IZJ4 473 aa18.9■□□□□ 0.62
HMGN1-207ENST00000436324 PCDHB18PQ96TA0 734 aa18.9■□□□□ 0.62
HMGN1-207ENST00000436324 GPR174Q9BXC1 333 aa18.9■□□□□ 0.62
HMGN1-207ENST00000436324 TKTL2Q9H0I9 626 aa18.9■□□□□ 0.62
HMGN1-207ENST00000436324 WDCPQ9H6R7 721 aa18.9■□□□□ 0.62
HMGN1-207ENST00000436324 METTL5Q9NRN9 209 aaKnown RBP18.9■□□□□ 0.62
HMGN1-207ENST00000436324 SEPT11Q9NVA2 429 aaKnown RBP18.9■□□□□ 0.62
HMGN1-207ENST00000436324 USP36Q9P275 1121 aaKnown RBP18.9■□□□□ 0.62
HMGN1-207ENST00000436324 SUN2Q9UH99 717 aa18.9■□□□□ 0.62
HMGN1-207ENST00000436324 PILRBQ9UKJ0 227 aa18.9■□□□□ 0.62
HMGN1-207ENST00000436324 ERVW-1Q9UQF0 538 aa18.9■□□□□ 0.62
HMGN1-207ENST00000436324 DAAM1Q9Y4D1 1078 aa18.9■□□□□ 0.62
HMGN1-207ENST00000436324 LNP1A1A4G5 178 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms