RNA–Protein interactions for RNA: ENST00000435401.1

LINC00353-201, long intergenic non-protein coding RNA 353, humanhuman

TSL 5 BASIC

Gene LINC00353, Length 685 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00353-201ENST00000435401 CSHL1Q14406 222 aa4.42□□□□□ -1.7
LINC00353-201ENST00000435401 KCNJ12Q14500 433 aa4.42□□□□□ -1.7
LINC00353-201ENST00000435401 KCNB1Q14721 858 aa4.42□□□□□ -1.7
LINC00353-201ENST00000435401 ATPAF1Q5TC12 328 aaPredicted RBP4.42□□□□□ -1.7
LINC00353-201ENST00000435401 C16orf89Q6UX73 402 aa4.42□□□□□ -1.7
LINC00353-201ENST00000435401 FTSJ3Q8IY81 847 aaKnown RBP4.42□□□□□ -1.7
LINC00353-201ENST00000435401 NGDNQ8NEJ9 315 aaKnown RBP4.42□□□□□ -1.7
LINC00353-201ENST00000435401 ZNF548Q8NEK5 533 aaPredicted RBP4.42□□□□□ -1.7
LINC00353-201ENST00000435401 MPLKIPQ8TAP9 179 aa4.42□□□□□ -1.7
LINC00353-201ENST00000435401 TRIM63Q969Q1 353 aa4.42□□□□□ -1.7
LINC00353-201ENST00000435401 TRAPPC9Q96Q05 1148 aa4.42□□□□□ -1.7
LINC00353-201ENST00000435401 NUDT22Q9BRQ3 303 aa4.42□□□□□ -1.7
LINC00353-201ENST00000435401 BRD8Q9H0E9 1235 aa4.42□□□□□ -1.7
LINC00353-201ENST00000435401 ZCWPW1Q9H0M4 648 aa4.42□□□□□ -1.7
LINC00353-201ENST00000435401 FAM234AQ9H0X4 552 aa4.42□□□□□ -1.7
LINC00353-201ENST00000435401 HIPK2Q9H2X6 1198 aa4.42□□□□□ -1.7
LINC00353-201ENST00000435401 ELAC1Q9H777 363 aaKnown RBP4.42□□□□□ -1.7
LINC00353-201ENST00000435401 VPS45Q9NRW7 570 aa4.42□□□□□ -1.7
LINC00353-201ENST00000435401 RRN3Q9NYV6 651 aa4.42□□□□□ -1.7
LINC00353-201ENST00000435401 KIF17Q9P2E2 1029 aa4.42□□□□□ -1.7
LINC00353-201ENST00000435401 KCND3Q9UK17 655 aa4.42□□□□□ -1.7
LINC00353-201ENST00000435401 VPS4AQ9UN37 437 aa4.42□□□□□ -1.7
LINC00353-201ENST00000435401 CACNA1IQ9P0X4 2223 aa4.41□□□□□ -1.7
LINC00353-201ENST00000435401 A8MVJ9 347 aa4.41□□□□□ -1.7
LINC00353-201ENST00000435401 H0Y3Z8 333 aa4.41□□□□□ -1.7
LINC00353-201ENST00000435401 EIF3FO00303 357 aaPredicted RBP4.41□□□□□ -1.7
LINC00353-201ENST00000435401 NPHP1O15259 732 aa4.41□□□□□ -1.7
LINC00353-201ENST00000435401 SMAD6O43541 496 aaKnown RBP4.41□□□□□ -1.7
LINC00353-201ENST00000435401 PRAMEF2O60811 474 aa4.41□□□□□ -1.7
LINC00353-201ENST00000435401 KRT38O76015 456 aa4.41□□□□□ -1.7
LINC00353-201ENST00000435401 TOMM40O96008 361 aa4.41□□□□□ -1.7
LINC00353-201ENST00000435401 CKMT1AP12532 417 aa4.41□□□□□ -1.7
LINC00353-201ENST00000435401 CST5P28325 142 aaPredicted RBP4.41□□□□□ -1.7
LINC00353-201ENST00000435401 ADD2P35612 726 aa4.41□□□□□ -1.7
LINC00353-201ENST00000435401 MAPK9P45984 424 aa4.41□□□□□ -1.7
LINC00353-201ENST00000435401 HTR6P50406 440 aa4.41□□□□□ -1.7
LINC00353-201ENST00000435401 SEMA3BQ13214 749 aa4.41□□□□□ -1.7
LINC00353-201ENST00000435401 STIM1Q13586 685 aa4.41□□□□□ -1.7
LINC00353-201ENST00000435401 ST3GAL2Q16842 350 aa4.41□□□□□ -1.7
LINC00353-201ENST00000435401 GALNTL6Q49A17 601 aa4.41□□□□□ -1.7
LINC00353-201ENST00000435401 SLC9C1Q4G0N8 1177 aa4.41□□□□□ -1.7
LINC00353-201ENST00000435401 CC2D1BQ5T0F9 858 aaKnown RBP4.41□□□□□ -1.7
LINC00353-201ENST00000435401 COLCA1Q6ZS62 124 aa4.41□□□□□ -1.7
LINC00353-201ENST00000435401 TTC30AQ86WT1 665 aa4.41□□□□□ -1.7
LINC00353-201ENST00000435401 CLASRPQ8N2M8 674 aaKnown RBP4.41□□□□□ -1.7
LINC00353-201ENST00000435401 C12orf76Q8N812 135 aaPredicted RBP4.41□□□□□ -1.7
LINC00353-201ENST00000435401 AFG1LQ8WV93 481 aa4.41□□□□□ -1.7
LINC00353-201ENST00000435401 WDR60Q8WVS4 1066 aa4.41□□□□□ -1.7
LINC00353-201ENST00000435401 C3orf49Q96BT1 292 aa4.41□□□□□ -1.7
LINC00353-201ENST00000435401 GCC1Q96CN9 775 aa4.41□□□□□ -1.7
LINC00353-201ENST00000435401 THOC3Q96J01 351 aaKnown RBP4.41□□□□□ -1.7
LINC00353-201ENST00000435401 UBXN10Q96LJ8 280 aa4.41□□□□□ -1.7
LINC00353-201ENST00000435401 EIF3CQ99613 913 aaKnown RBP4.41□□□□□ -1.7
LINC00353-201ENST00000435401 C9orf78Q9NZ63 289 aaPredicted RBP4.41□□□□□ -1.7
LINC00353-201ENST00000435401 FEM1BQ9UK73 627 aa4.41□□□□□ -1.7
LINC00353-201ENST00000435401 RAB21Q9UL25 225 aa4.41□□□□□ -1.7
LINC00353-201ENST00000435401 LOC105369274A0A096LPK9 316 aa4.4□□□□□ -1.71
LINC00353-201ENST00000435401 LOC102723532A0A0G2JNH3 316 aa4.4□□□□□ -1.71
LINC00353-201ENST00000435401 CLIC1O00299 241 aa4.4□□□□□ -1.71
LINC00353-201ENST00000435401 MBPP02686 304 aaPredicted RBP4.4□□□□□ -1.71
LINC00353-201ENST00000435401 PYGLP06737 847 aa4.4□□□□□ -1.71
LINC00353-201ENST00000435401 HSD3B1P14060 373 aa4.4□□□□□ -1.71
LINC00353-201ENST00000435401 RXRAP19793 462 aa4.4□□□□□ -1.71
LINC00353-201ENST00000435401 ADRA1DP25100 572 aa4.4□□□□□ -1.71
LINC00353-201ENST00000435401 CCT5P48643 541 aa4.4□□□□□ -1.71
LINC00353-201ENST00000435401 SF3A3Q12874 501 aaKnown RBP eCLIP4.4□□□□□ -1.71
LINC00353-201ENST00000435401 DNASE1L3Q13609 305 aa4.4□□□□□ -1.71
LINC00353-201ENST00000435401 RPS6KA2Q15349 733 aa4.4□□□□□ -1.71
LINC00353-201ENST00000435401 TRIM60Q495X7 471 aa4.4□□□□□ -1.71
LINC00353-201ENST00000435401 HSP90AB4PQ58FF6 505 aa4.4□□□□□ -1.71
LINC00353-201ENST00000435401 TTC22Q5TAA0 569 aa4.4□□□□□ -1.71
LINC00353-201ENST00000435401 DAB2IPQ5VWQ8 1189 aa4.4□□□□□ -1.71
LINC00353-201ENST00000435401 NFRKBQ6P4R8 1299 aa4.4□□□□□ -1.71
LINC00353-201ENST00000435401 CYP26C1Q6V0L0 522 aa4.4□□□□□ -1.71
LINC00353-201ENST00000435401 RASGRP2Q7LDG7 609 aa4.4□□□□□ -1.71
LINC00353-201ENST00000435401 KRT27Q7Z3Y8 459 aa4.4□□□□□ -1.71
LINC00353-201ENST00000435401 TRABD2AQ86V40 505 aa4.4□□□□□ -1.71
LINC00353-201ENST00000435401 HERC6Q8IVU3 1022 aa4.4□□□□□ -1.71
LINC00353-201ENST00000435401 OR4N4Q8N0Y3 316 aa4.4□□□□□ -1.71
LINC00353-201ENST00000435401 HMGB4Q8WW32 186 aa4.4□□□□□ -1.71
LINC00353-201ENST00000435401 NPIPB3Q92617 1050 aa4.4□□□□□ -1.71
LINC00353-201ENST00000435401 RSC1A1Q92681 617 aa4.4□□□□□ -1.71
LINC00353-201ENST00000435401 VPS50Q96JG6 964 aa4.4□□□□□ -1.71
LINC00353-201ENST00000435401 CCDC134Q9H6E4 229 aa4.4□□□□□ -1.71
LINC00353-201ENST00000435401 USP29Q9HBJ7 922 aa4.4□□□□□ -1.71
LINC00353-201ENST00000435401 GGA3Q9NZ52 723 aa4.4□□□□□ -1.71
LINC00353-201ENST00000435401 ZNF112Q9UJU3 913 aa4.4□□□□□ -1.71
LINC00353-201ENST00000435401 LZTS1Q9Y250 596 aa4.4□□□□□ -1.71
LINC00353-201ENST00000435401 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.4□□□□□ -1.71
LINC00353-201ENST00000435401 GXYLT2A0PJZ3 443 aa4.39□□□□□ -1.71
LINC00353-201ENST00000435401 E7EVH7 732 aa4.39□□□□□ -1.71
LINC00353-201ENST00000435401 IRAK2O43187 625 aa4.39□□□□□ -1.71
LINC00353-201ENST00000435401 AGR2O95994 175 aa4.39□□□□□ -1.71
LINC00353-201ENST00000435401 CD63P08962 238 aa4.39□□□□□ -1.71
LINC00353-201ENST00000435401 TMIGD3P0DMS9 266 aaPredicted RBP4.39□□□□□ -1.71
LINC00353-201ENST00000435401 CNTFP26441 200 aa4.39□□□□□ -1.71
LINC00353-201ENST00000435401 TACR3P29371 465 aa4.39□□□□□ -1.71
LINC00353-201ENST00000435401 GALNSP34059 522 aa4.39□□□□□ -1.71
LINC00353-201ENST00000435401 CDKN2AP42771 156 aaKnown RBP4.39□□□□□ -1.71
LINC00353-201ENST00000435401 POLE2P56282 527 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms