RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 MTX3Q5HYI7 312 aa11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 SLC27A3Q5K4L6 730 aa11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 ARHGEF16Q5VV41 709 aa11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 BORAQ6PGQ7 559 aa11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 ELMSAN1Q6PJG2 1045 aa11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 TMEM130Q8N3G9 435 aa11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 C12orf43Q96C57 262 aaKnown RBP11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 COX4I2Q96KJ9 171 aa11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 TSPYL2Q9H2G4 693 aaPredicted RBP11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 ASNSD1Q9NWL6 643 aa11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 MKS1Q9NXB0 559 aa11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 TMX2Q9Y320 296 aa11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 RBM47A0AV96 593 aaKnown RBP11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 APOL1O14791 398 aa11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 MPSTP25325 297 aa11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 HALP42357 657 aa11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 DPP6P42658 865 aa11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 OXCT1P55809 520 aa11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 RPS6P62753 249 aaKnown RBP11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 CRY2Q49AN0 593 aa11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 CCDC92Q53HC0 331 aaPredicted RBP11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 OR6B2Q6IFH4 312 aa11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 EPGNQ6UW88 154 aa11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 PLD6Q8N2A8 252 aaKnown RBP11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 DDHD1Q8NEL9 900 aa11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 RNF157Q96PX1 679 aa11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 SLC29A1Q99808 456 aa11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 ZNF518BQ9C0D4 1074 aa11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 NOL11Q9H8H0 719 aaKnown RBP11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 TRNAU1APQ9NX07 287 aaKnown RBP11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 PRPF19Q9UMS4 504 aaKnown RBP11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 CTDP1Q9Y5B0 961 aaPredicted RBP11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 COL24A1Q17RW2 1714 aa11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 J3QRK9 145 aa11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 CBFA2T3O75081 653 aa11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 DGAT1O75907 488 aa11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 ZBTB11O95625 1053 aaPredicted RBP11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 TMED10P49755 219 aaKnown RBP11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 C21orf59P57076 290 aa11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 ZNF699Q32M78 642 aa11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 LSM12Q3MHD2 195 aaKnown RBP11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 PIGGQ5H8A4 983 aa11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 LAYNQ6UX15 382 aa11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 MCPH1Q8NEM0 835 aa11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 APBB2Q92870 758 aa11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 FBXL8Q96CD0 374 aa11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 ZNF668Q96K58 619 aaPredicted RBP11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 NIF3L1Q9GZT8 377 aa11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 CAB39LQ9H9S4 337 aa11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 TBCCD1Q9NVR7 557 aa11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 CNTN6Q9UQ52 1028 aa11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 AP4S1Q9Y587 144 aa11.83□□□□□ -0.52
HMGCS1-202ENST00000433297 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.82□□□□□ -0.52
HMGCS1-202ENST00000433297 ASS1P00966 412 aaKnown RBP11.82□□□□□ -0.52
HMGCS1-202ENST00000433297 MCF2P10911 925 aa11.82□□□□□ -0.52
HMGCS1-202ENST00000433297 ZNF26P17031 533 aaPredicted RBP11.82□□□□□ -0.52
HMGCS1-202ENST00000433297 PHKA2P46019 1235 aa11.82□□□□□ -0.52
HMGCS1-202ENST00000433297 ZNF132P52740 706 aa11.82□□□□□ -0.52
HMGCS1-202ENST00000433297 PGGT1BP53609 377 aa11.82□□□□□ -0.52
HMGCS1-202ENST00000433297 CLDN10P78369 228 aa11.82□□□□□ -0.52
HMGCS1-202ENST00000433297 KRT76Q01546 638 aa11.82□□□□□ -0.52
HMGCS1-202ENST00000433297 PTK2BQ14289 1009 aa11.82□□□□□ -0.52
HMGCS1-202ENST00000433297 TGFBIQ15582 683 aa11.82□□□□□ -0.52
HMGCS1-202ENST00000433297 DLG2Q15700 870 aa11.82□□□□□ -0.52
HMGCS1-202ENST00000433297 FAM47CQ5HY64 1035 aa11.82□□□□□ -0.52
HMGCS1-202ENST00000433297 GPR107Q5VW38 600 aa11.82□□□□□ -0.52
HMGCS1-202ENST00000433297 XYLT1Q86Y38 959 aa11.82□□□□□ -0.52
HMGCS1-202ENST00000433297 PQLC3Q8N755 202 aa11.82□□□□□ -0.52
HMGCS1-202ENST00000433297 RXFP2Q8WXD0 754 aa11.82□□□□□ -0.52
HMGCS1-202ENST00000433297 MGAT1P26572 445 aa11.82□□□□□ -0.52
HMGCS1-202ENST00000433297 DGKZQ13574 1117 aa11.82□□□□□ -0.52
HMGCS1-202ENST00000433297 CDR2LQ86X02 465 aaPredicted RBP11.82□□□□□ -0.52
HMGCS1-202ENST00000433297 TRIM50Q86XT4 487 aa11.82□□□□□ -0.52
HMGCS1-202ENST00000433297 TICAM1Q8IUC6 712 aa11.82□□□□□ -0.52
HMGCS1-202ENST00000433297 SYTL5Q8TDW5 730 aaPredicted RBP11.82□□□□□ -0.52
HMGCS1-202ENST00000433297 ISOC1Q96CN7 298 aa11.82□□□□□ -0.52
HMGCS1-202ENST00000433297 IDI2Q9BXS1 227 aa11.82□□□□□ -0.52
HMGCS1-202ENST00000433297 ARHGAP28Q9P2N2 729 aa11.82□□□□□ -0.52
HMGCS1-202ENST00000433297 FZD1Q9UP38 647 aa11.82□□□□□ -0.52
HMGCS1-202ENST00000433297 FUOMA2VDF0 154 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 TMEM247A6NEH6 219 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 M0QYV0 167 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 RGL2O15211 777 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 TFE3P19532 575 aaPredicted RBP11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 SFNP31947 248 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 HOXD12P35452 270 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 PRKCEQ02156 737 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 GSTM4Q03013 218 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 RALGDSQ12967 914 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 PGM5Q15124 567 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 STILQ15468 1287 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 TTC33Q6PID6 262 aaPredicted RBP11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 ZBTB49Q6ZSB9 765 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 CHERPQ8IWX8 916 aaKnown RBP11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 SP8Q8IXZ3 490 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 TMEM102Q8N9M5 508 aaPredicted RBP11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 DQX1Q8TE96 717 aaKnown RBP11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 ATP6V0A1Q93050 837 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 SLC35B4Q969S0 331 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 PRMT6Q96LA8 375 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms