RNA–Protein interactions for RNA: ENST00000431496.1

AC055876.3-201, humanhuman

BASIC

Gene AC055876.3, Length 288 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055876.3-201ENST00000431496 PCDHB9Q9Y5E1 797 aa16.76■□□□□ 0.27
AC055876.3-201ENST00000431496 ANKRD11Q6UB99 2663 aaPredicted RBP16.76■□□□□ 0.27
AC055876.3-201ENST00000431496 PKD1L2Q7Z442 2459 aa16.76■□□□□ 0.27
AC055876.3-201ENST00000431496 FAM221BA6H8Z2 402 aa16.75■□□□□ 0.27
AC055876.3-201ENST00000431496 E5RJQ4 531 aa16.75■□□□□ 0.27
AC055876.3-201ENST00000431496 THAP12O43422 761 aa16.75■□□□□ 0.27
AC055876.3-201ENST00000431496 SEMA4FO95754 770 aa16.75■□□□□ 0.27
AC055876.3-201ENST00000431496 TRUB2O95900 331 aaKnown RBP16.75■□□□□ 0.27
AC055876.3-201ENST00000431496 MOCS2O96007 188 aaPredicted RBP16.75■□□□□ 0.27
AC055876.3-201ENST00000431496 ASLP04424 464 aa16.75■□□□□ 0.27
AC055876.3-201ENST00000431496 ZNF883P0CG24 379 aa16.75■□□□□ 0.27
AC055876.3-201ENST00000431496 SLC9A1P19634 815 aa16.75■□□□□ 0.27
AC055876.3-201ENST00000431496 GNA15P30679 374 aa16.75■□□□□ 0.27
AC055876.3-201ENST00000431496 CSNK1EP49674 416 aaKnown RBP16.75■□□□□ 0.27
AC055876.3-201ENST00000431496 AFF3P51826 1226 aaKnown RBP16.75■□□□□ 0.27
AC055876.3-201ENST00000431496 ST8SIA6P61647 398 aa16.75■□□□□ 0.27
AC055876.3-201ENST00000431496 ARID5BQ14865 1188 aa16.75■□□□□ 0.27
AC055876.3-201ENST00000431496 ZNF423Q2M1K9 1284 aa16.75■□□□□ 0.27
AC055876.3-201ENST00000431496 HLA-BQ31612 363 aa16.75■□□□□ 0.27
AC055876.3-201ENST00000431496 FSCBQ5H9T9 825 aa16.75■□□□□ 0.27
AC055876.3-201ENST00000431496 ZNF776Q68DI1 518 aaPredicted RBP16.75■□□□□ 0.27
AC055876.3-201ENST00000431496 GJB7Q6PEY0 223 aa16.75■□□□□ 0.27
AC055876.3-201ENST00000431496 TRIM65Q6PJ69 517 aa16.75■□□□□ 0.27
AC055876.3-201ENST00000431496 MMS22LQ6ZRQ5 1243 aa16.75■□□□□ 0.27
AC055876.3-201ENST00000431496 NAXDQ8IW45 347 aa16.75■□□□□ 0.27
AC055876.3-201ENST00000431496 CCDC117Q8IWD4 279 aaPredicted RBP16.75■□□□□ 0.27
AC055876.3-201ENST00000431496 KDM1BQ8NB78 822 aa16.75■□□□□ 0.27
AC055876.3-201ENST00000431496 MRGPRX3Q96LB0 322 aa16.75■□□□□ 0.27
AC055876.3-201ENST00000431496 THAP9Q9H5L6 903 aa16.75■□□□□ 0.27
AC055876.3-201ENST00000431496 SGK2Q9HBY8 427 aa16.75■□□□□ 0.27
AC055876.3-201ENST00000431496 OSGEPQ9NPF4 335 aa16.75■□□□□ 0.27
AC055876.3-201ENST00000431496 XPO7Q9UIA9 1087 aaKnown RBP16.75■□□□□ 0.27
AC055876.3-201ENST00000431496 KLK13Q9UKR3 277 aa16.75■□□□□ 0.27
AC055876.3-201ENST00000431496 ZMIZ1Q9ULJ6 1067 aa16.75■□□□□ 0.27
AC055876.3-201ENST00000431496 SLCO1B1Q9Y6L6 691 aa16.75■□□□□ 0.27
AC055876.3-201ENST00000431496 A0A1B0GVT2 93 aa16.74■□□□□ 0.27
AC055876.3-201ENST00000431496 TMEM8BA6NDV4 472 aa16.74■□□□□ 0.27
AC055876.3-201ENST00000431496 BECN2A8MW95 431 aa16.74■□□□□ 0.27
AC055876.3-201ENST00000431496 CBFA2T3O75081 653 aa16.74■□□□□ 0.27
AC055876.3-201ENST00000431496 LUC7L3O95232 432 aaKnown RBP16.74■□□□□ 0.27
AC055876.3-201ENST00000431496 CER1O95813 267 aa16.74■□□□□ 0.27
AC055876.3-201ENST00000431496 IGLV3-25P01717 112 aa16.74■□□□□ 0.27
AC055876.3-201ENST00000431496 APOEP02649 317 aa16.74■□□□□ 0.27
AC055876.3-201ENST00000431496 TACR2P21452 398 aa16.74■□□□□ 0.27
AC055876.3-201ENST00000431496 MATKP42679 507 aa16.74■□□□□ 0.27
AC055876.3-201ENST00000431496 EIF4EBP2Q13542 120 aaPredicted RBP16.74■□□□□ 0.27
AC055876.3-201ENST00000431496 CDH18Q13634 790 aa16.74■□□□□ 0.27
AC055876.3-201ENST00000431496 TAF5Q15542 800 aa16.74■□□□□ 0.27
AC055876.3-201ENST00000431496 CAMK4Q16566 473 aa16.74■□□□□ 0.27
AC055876.3-201ENST00000431496 HNRNPA1L2Q32P51 320 aaKnown RBP16.74■□□□□ 0.27
AC055876.3-201ENST00000431496 TTC31Q49AM3 519 aaPredicted RBP16.74■□□□□ 0.27
AC055876.3-201ENST00000431496 GBP6Q6ZN66 633 aa16.74■□□□□ 0.27
AC055876.3-201ENST00000431496 RAB44Q7Z6P3 723 aaPredicted RBP16.74■□□□□ 0.27
AC055876.3-201ENST00000431496 CREBRFQ8IUR6 639 aa16.74■□□□□ 0.27
AC055876.3-201ENST00000431496 LGI2Q8N0V4 545 aa16.74■□□□□ 0.27
AC055876.3-201ENST00000431496 CHCHD4Q8N4Q1 142 aa16.74■□□□□ 0.27
AC055876.3-201ENST00000431496 WDTC1Q8N5D0 677 aa16.74■□□□□ 0.27
AC055876.3-201ENST00000431496 SNX19Q92543 992 aa16.74■□□□□ 0.27
AC055876.3-201ENST00000431496 BIRC7Q96CA5 298 aa16.74■□□□□ 0.27
AC055876.3-201ENST00000431496 BTN2A3PQ96KV6 586 aa16.74■□□□□ 0.27
AC055876.3-201ENST00000431496 KIAA1522Q9P206 1035 aaPredicted RBP16.74■□□□□ 0.27
AC055876.3-201ENST00000431496 ERVW-1Q9UQF0 538 aa16.74■□□□□ 0.27
AC055876.3-201ENST00000431496 MUC22E2RYF6 1773 aaPredicted RBP16.74■□□□□ 0.27
AC055876.3-201ENST00000431496 ZFHX4Q86UP3 3567 aa16.73■□□□□ 0.27
AC055876.3-201ENST00000431496 CACNA1GO43497 2377 aa16.73■□□□□ 0.27
AC055876.3-201ENST00000431496 SIN3BO75182 1162 aa16.73■□□□□ 0.27
AC055876.3-201ENST00000431496 FSBPO95073 299 aa16.73■□□□□ 0.27
AC055876.3-201ENST00000431496 SRPRAP08240 638 aaKnown RBP16.73■□□□□ 0.27
AC055876.3-201ENST00000431496 USP8P40818 1118 aa16.73■□□□□ 0.27
AC055876.3-201ENST00000431496 PITX1P78337 314 aaPredicted RBP16.73■□□□□ 0.27
AC055876.3-201ENST00000431496 APBA1Q02410 837 aa16.73■□□□□ 0.27
AC055876.3-201ENST00000431496 PDCLQ13371 301 aa16.73■□□□□ 0.27
AC055876.3-201ENST00000431496 ARHGAP44Q17R89 818 aa16.73■□□□□ 0.27
AC055876.3-201ENST00000431496 KIF19Q2TAC6 998 aa16.73■□□□□ 0.27
AC055876.3-201ENST00000431496 PITRM1Q5JRX3 1037 aa16.73■□□□□ 0.27
AC055876.3-201ENST00000431496 C9orf64Q5T6V5 341 aa16.73■□□□□ 0.27
AC055876.3-201ENST00000431496 RAP1GAP2Q684P5 730 aa16.73■□□□□ 0.27
AC055876.3-201ENST00000431496 DBX2Q6ZNG2 339 aa16.73■□□□□ 0.27
AC055876.3-201ENST00000431496 USP30Q70CQ3 517 aa16.73■□□□□ 0.27
AC055876.3-201ENST00000431496 IRF2BP1Q8IU81 584 aa16.73■□□□□ 0.27
AC055876.3-201ENST00000431496 SHC3Q92529 594 aa16.73■□□□□ 0.27
AC055876.3-201ENST00000431496 PABPC3Q9H361 631 aaKnown RBP16.73■□□□□ 0.27
AC055876.3-201ENST00000431496 TM9SF3Q9HD45 589 aa16.73■□□□□ 0.27
AC055876.3-201ENST00000431496 TM7SF3Q9NS93 570 aa16.73■□□□□ 0.27
AC055876.3-201ENST00000431496 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.73■□□□□ 0.27
AC055876.3-201ENST00000431496 APEX2Q9UBZ4 518 aa16.73■□□□□ 0.27
AC055876.3-201ENST00000431496 TJP2Q9UDY2 1190 aa16.73■□□□□ 0.27
AC055876.3-201ENST00000431496 SLCO3A1Q9UIG8 710 aa16.73■□□□□ 0.27
AC055876.3-201ENST00000431496 PCOLCE2Q9UKZ9 415 aa16.73■□□□□ 0.27
AC055876.3-201ENST00000431496 SCML1Q9UN30 329 aa16.73■□□□□ 0.27
AC055876.3-201ENST00000431496 NCKAP1Q9Y2A7 1128 aa16.73■□□□□ 0.27
AC055876.3-201ENST00000431496 FNDC3AQ9Y2H6 1198 aaKnown RBP16.73■□□□□ 0.27
AC055876.3-201ENST00000431496 KNTC1P50748 2209 aa16.72■□□□□ 0.27
AC055876.3-201ENST00000431496 DMXL2Q8TDJ6 3036 aa16.72■□□□□ 0.27
AC055876.3-201ENST00000431496 TARSL2A2RTX5 802 aaKnown RBP16.72■□□□□ 0.27
AC055876.3-201ENST00000431496 GTPBP10A4D1E9 387 aaKnown RBP16.72■□□□□ 0.27
AC055876.3-201ENST00000431496 TTC34A8MYJ7 566 aa16.72■□□□□ 0.27
AC055876.3-201ENST00000431496 KCNU1A8MYU2 1149 aa16.72■□□□□ 0.27
AC055876.3-201ENST00000431496 RNASEH1O60930 286 aaKnown RBP16.72■□□□□ 0.27
AC055876.3-201ENST00000431496 MOCS3O95396 460 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms