RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 MYLK2Q9H1R3 596 aa14.34□□□□□ -0.11
HOXC4-202ENST00000430889 MANSC1Q9H8J5 431 aa14.34□□□□□ -0.11
HOXC4-202ENST00000430889 DMAP1Q9NPF5 467 aaPredicted RBP14.34□□□□□ -0.11
HOXC4-202ENST00000430889 ARHGEF3Q9NR81 526 aa14.34□□□□□ -0.11
HOXC4-202ENST00000430889 CENPFP49454 3210 aa14.33□□□□□ -0.11
HOXC4-202ENST00000430889 VWA8A3KMH1 1905 aa14.33□□□□□ -0.11
HOXC4-202ENST00000430889 TNFRSF10BO14763 440 aa14.33□□□□□ -0.11
HOXC4-202ENST00000430889 B4GALT3O60512 393 aa14.33□□□□□ -0.11
HOXC4-202ENST00000430889 KRT38O76015 456 aa14.33□□□□□ -0.11
HOXC4-202ENST00000430889 TGDSO95455 350 aa14.33□□□□□ -0.11
HOXC4-202ENST00000430889 NQO1P15559 274 aaKnown RBP14.33□□□□□ -0.11
HOXC4-202ENST00000430889 PGAM1P18669 254 aa14.33□□□□□ -0.11
HOXC4-202ENST00000430889 CNTFP26441 200 aa14.33□□□□□ -0.11
HOXC4-202ENST00000430889 MGAT1P26572 445 aa14.33□□□□□ -0.11
HOXC4-202ENST00000430889 CD68P34810 354 aaPredicted RBP14.33□□□□□ -0.11
HOXC4-202ENST00000430889 BMPR2Q13873 1038 aa14.33□□□□□ -0.11
HOXC4-202ENST00000430889 FRG1Q14331 258 aaKnown RBP14.33□□□□□ -0.11
HOXC4-202ENST00000430889 ARL13BQ3SXY8 428 aa14.33□□□□□ -0.11
HOXC4-202ENST00000430889 MAP3K21Q5TCX8 1036 aa14.33□□□□□ -0.11
HOXC4-202ENST00000430889 LGSNQ5TDP6 509 aa14.33□□□□□ -0.11
HOXC4-202ENST00000430889 PDZD4Q76G19 769 aaPredicted RBP14.33□□□□□ -0.11
HOXC4-202ENST00000430889 METTL23Q86XA0 190 aa14.33□□□□□ -0.11
HOXC4-202ENST00000430889 SMC1BQ8NDV3 1235 aa14.33□□□□□ -0.11
HOXC4-202ENST00000430889 EDEM1Q92611 657 aa14.33□□□□□ -0.11
HOXC4-202ENST00000430889 FERMT1Q9BQL6 677 aa14.33□□□□□ -0.11
HOXC4-202ENST00000430889 NAT9Q9BTE0 207 aa14.33□□□□□ -0.11
HOXC4-202ENST00000430889 TMEM51Q9NW97 253 aa14.33□□□□□ -0.11
HOXC4-202ENST00000430889 SYBUQ9NX95 663 aa14.33□□□□□ -0.11
HOXC4-202ENST00000430889 ARHGEF38Q9NXL2 777 aa14.33□□□□□ -0.11
HOXC4-202ENST00000430889 SNX10Q9Y5X0 201 aa14.33□□□□□ -0.11
HOXC4-202ENST00000430889 NYNRINQ9P2P1 1898 aaKnown RBP14.33□□□□□ -0.12
HOXC4-202ENST00000430889 WDR91A4D1P6 747 aa14.33□□□□□ -0.12
HOXC4-202ENST00000430889 F5H423 210 aaPredicted RBP14.33□□□□□ -0.12
HOXC4-202ENST00000430889 COPEO14579 308 aa14.33□□□□□ -0.12
HOXC4-202ENST00000430889 LRIG2O94898 1065 aa14.33□□□□□ -0.12
HOXC4-202ENST00000430889 UNC5CO95185 931 aa14.33□□□□□ -0.12
HOXC4-202ENST00000430889 AP2A1O95782 977 aa14.33□□□□□ -0.12
HOXC4-202ENST00000430889 PRKAR2AP13861 404 aaKnown RBP14.33□□□□□ -0.12
HOXC4-202ENST00000430889 HOXC13P31276 330 aa14.33□□□□□ -0.12
HOXC4-202ENST00000430889 KCNJ2P63252 427 aa14.33□□□□□ -0.12
HOXC4-202ENST00000430889 CRADDP78560 199 aa14.33□□□□□ -0.12
HOXC4-202ENST00000430889 CRYMQ14894 314 aa14.33□□□□□ -0.12
HOXC4-202ENST00000430889 SEPT7Q16181 437 aaKnown RBP14.33□□□□□ -0.12
HOXC4-202ENST00000430889 PAN2Q504Q3 1202 aaKnown RBP14.33□□□□□ -0.12
HOXC4-202ENST00000430889 OVOS1Q6IE37 1185 aa14.33□□□□□ -0.12
HOXC4-202ENST00000430889 DCLRE1AQ6PJP8 1040 aa14.33□□□□□ -0.12
HOXC4-202ENST00000430889 UNC5BQ8IZJ1 945 aa14.33□□□□□ -0.12
HOXC4-202ENST00000430889 CCNYQ8ND76 341 aa14.33□□□□□ -0.12
HOXC4-202ENST00000430889 THOC1Q96FV9 657 aaKnown RBP14.33□□□□□ -0.12
HOXC4-202ENST00000430889 TKTL2Q9H0I9 626 aa14.33□□□□□ -0.12
HOXC4-202ENST00000430889 GBA3Q9H227 469 aa14.33□□□□□ -0.12
HOXC4-202ENST00000430889 CASS4Q9NQ75 786 aa14.33□□□□□ -0.12
HOXC4-202ENST00000430889 TRMT13Q9NUP7 481 aaKnown RBP14.33□□□□□ -0.12
HOXC4-202ENST00000430889 SIRPGQ9P1W8 387 aa14.33□□□□□ -0.12
HOXC4-202ENST00000430889 F8W810 466 aa14.32□□□□□ -0.12
HOXC4-202ENST00000430889 KCNK1O00180 336 aa14.32□□□□□ -0.12
HOXC4-202ENST00000430889 IRAK2O43187 625 aa14.32□□□□□ -0.12
HOXC4-202ENST00000430889 MTSS1O43312 755 aa14.32□□□□□ -0.12
HOXC4-202ENST00000430889 CACNG3O60359 315 aa14.32□□□□□ -0.12
HOXC4-202ENST00000430889 DCTN3O75935 186 aa14.32□□□□□ -0.12
HOXC4-202ENST00000430889 BGNP21810 368 aa14.32□□□□□ -0.12
HOXC4-202ENST00000430889 CRHR1P34998 444 aa14.32□□□□□ -0.12
HOXC4-202ENST00000430889 GARSP41250 739 aaKnown RBP14.32□□□□□ -0.12
HOXC4-202ENST00000430889 ZNF33AQ06730 810 aa14.32□□□□□ -0.12
HOXC4-202ENST00000430889 DSC1Q08554 894 aa14.32□□□□□ -0.12
HOXC4-202ENST00000430889 ZBTB17Q13105 803 aa14.32□□□□□ -0.12
HOXC4-202ENST00000430889 RIPK1Q13546 671 aa14.32□□□□□ -0.12
HOXC4-202ENST00000430889 ITGA7Q13683 1181 aa14.32□□□□□ -0.12
HOXC4-202ENST00000430889 MAPRE1Q15691 268 aaKnown RBP14.32□□□□□ -0.12
HOXC4-202ENST00000430889 MANEALQ5VSG8 457 aa14.32□□□□□ -0.12
HOXC4-202ENST00000430889 CES4AQ5XG92 561 aa14.32□□□□□ -0.12
HOXC4-202ENST00000430889 RTN4RL1Q86UN2 441 aaPredicted RBP14.32□□□□□ -0.12
HOXC4-202ENST00000430889 PARP9Q8IXQ6 854 aa14.32□□□□□ -0.12
HOXC4-202ENST00000430889 PCSK9Q8NBP7 692 aaKnown RBP14.32□□□□□ -0.12
HOXC4-202ENST00000430889 RFWD2Q8NHY2 731 aa14.32□□□□□ -0.12
HOXC4-202ENST00000430889 LINC01599Q8WXQ3 324 aa14.32□□□□□ -0.12
HOXC4-202ENST00000430889 ERP27Q96DN0 273 aa14.32□□□□□ -0.12
HOXC4-202ENST00000430889 EPAS1Q99814 870 aa14.32□□□□□ -0.12
HOXC4-202ENST00000430889 MLPHQ9BV36 600 aaPredicted RBP14.32□□□□□ -0.12
HOXC4-202ENST00000430889 TSSK1BQ9BXA7 367 aa14.32□□□□□ -0.12
HOXC4-202ENST00000430889 WDCPQ9H6R7 721 aa14.32□□□□□ -0.12
HOXC4-202ENST00000430889 KCNK13Q9HB14 408 aa14.32□□□□□ -0.12
HOXC4-202ENST00000430889 RGS18Q9NS28 235 aa14.32□□□□□ -0.12
HOXC4-202ENST00000430889 SEPT10Q9P0V9 454 aa14.32□□□□□ -0.12
HOXC4-202ENST00000430889 OR12D3Q9UGF7 316 aa14.32□□□□□ -0.12
HOXC4-202ENST00000430889 PCDHB8Q9UN66 801 aa14.32□□□□□ -0.12
HOXC4-202ENST00000430889 NUMBLQ9Y6R0 609 aa14.32□□□□□ -0.12
HOXC4-202ENST00000430889 TTC3P53804 2025 aa14.32□□□□□ -0.12
HOXC4-202ENST00000430889 TMEM189-UBE2V1I3L0A0 370 aa14.31□□□□□ -0.12
HOXC4-202ENST00000430889 GSRP00390 522 aa14.31□□□□□ -0.12
HOXC4-202ENST00000430889 T-ENOLP0DO92 83 aa14.31□□□□□ -0.12
HOXC4-202ENST00000430889 MX2P20592 715 aa14.31□□□□□ -0.12
HOXC4-202ENST00000430889 CYP2C18P33260 490 aa14.31□□□□□ -0.12
HOXC4-202ENST00000430889 SESN2P58004 480 aaPredicted RBP14.31□□□□□ -0.12
HOXC4-202ENST00000430889 IFRD2Q12894 506 aaPredicted RBP14.31□□□□□ -0.12
HOXC4-202ENST00000430889 MBTPS1Q14703 1052 aa14.31□□□□□ -0.12
HOXC4-202ENST00000430889 TEX44Q53QW1 395 aa14.31□□□□□ -0.12
HOXC4-202ENST00000430889 STXBP5Q5T5C0 1151 aa14.31□□□□□ -0.12
HOXC4-202ENST00000430889 PACS1Q6VY07 963 aa14.31□□□□□ -0.12
HOXC4-202ENST00000430889 NLRP9Q7RTR0 991 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms