RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 GAKO14976 1311 aa15.71■□□□□ 0.11
PTPRF-206ENST00000429895 LRRC14BA6NHZ5 514 aa15.71■□□□□ 0.11
PTPRF-206ENST00000429895 SLCO1B7G3V0H7 640 aa15.71■□□□□ 0.11
PTPRF-206ENST00000429895 STX4Q12846 297 aa15.71■□□□□ 0.11
PTPRF-206ENST00000429895 INAQ16352 499 aa15.71■□□□□ 0.11
PTPRF-206ENST00000429895 GRTP1Q5TC63 336 aa15.71■□□□□ 0.11
PTPRF-206ENST00000429895 KDM7AQ6ZMT4 941 aa15.71■□□□□ 0.11
PTPRF-206ENST00000429895 SPATA20Q8TB22 786 aa15.71■□□□□ 0.11
PTPRF-206ENST00000429895 MIR1-1HGQ9H1L0 117 aa15.71■□□□□ 0.11
PTPRF-206ENST00000429895 TMBIM4Q9HC24 238 aa15.71■□□□□ 0.11
PTPRF-206ENST00000429895 RPRD1BQ9NQG5 326 aaKnown RBP15.71■□□□□ 0.11
PTPRF-206ENST00000429895 CES2O00748 559 aa15.71■□□□□ 0.11
PTPRF-206ENST00000429895 RTN3O95197 1032 aaPredicted RBP15.71■□□□□ 0.11
PTPRF-206ENST00000429895 FAM86B2P0C5J1 330 aa15.71■□□□□ 0.11
PTPRF-206ENST00000429895 PLK1P53350 603 aa15.71■□□□□ 0.11
PTPRF-206ENST00000429895 NUP107P57740 925 aa15.71■□□□□ 0.11
PTPRF-206ENST00000429895 TGFB2P61812 414 aa15.71■□□□□ 0.11
PTPRF-206ENST00000429895 PPATQ06203 517 aa15.71■□□□□ 0.11
PTPRF-206ENST00000429895 INSCQ1MX18 579 aa15.71■□□□□ 0.11
PTPRF-206ENST00000429895 HTR3CQ8WXA8 447 aa15.71■□□□□ 0.11
PTPRF-206ENST00000429895 COL26A1Q96A83 441 aa15.71■□□□□ 0.11
PTPRF-206ENST00000429895 TKTL2Q9H0I9 626 aa15.71■□□□□ 0.11
PTPRF-206ENST00000429895 POMKQ9H5K3 350 aa15.71■□□□□ 0.11
PTPRF-206ENST00000429895 HMX1Q9NP08 348 aaPredicted RBP15.71■□□□□ 0.11
PTPRF-206ENST00000429895 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.71■□□□□ 0.11
PTPRF-206ENST00000429895 AKAP7Q9P0M2 348 aaPredicted RBP15.71■□□□□ 0.11
PTPRF-206ENST00000429895 ZNF862O60290 1169 aa15.71■□□□□ 0.1
PTPRF-206ENST00000429895 GJB6O95452 261 aa15.71■□□□□ 0.1
PTPRF-206ENST00000429895 ELK3P41970 407 aa15.71■□□□□ 0.1
PTPRF-206ENST00000429895 PTPAQ15257 358 aa15.71■□□□□ 0.1
PTPRF-206ENST00000429895 FAM98BQ52LJ0 330 aaKnown RBP15.71■□□□□ 0.1
PTPRF-206ENST00000429895 DTNBP1Q96EV8 351 aa15.71■□□□□ 0.1
PTPRF-206ENST00000429895 P2RX7Q99572 595 aaKnown RBP15.71■□□□□ 0.1
PTPRF-206ENST00000429895 KLHL4Q9C0H6 718 aa15.71■□□□□ 0.1
PTPRF-206ENST00000429895 UBA2Q9UBT2 640 aaPredicted RBP15.71■□□□□ 0.1
PTPRF-206ENST00000429895 FAM205AQ6ZU69 1335 aa15.7■□□□□ 0.1
PTPRF-206ENST00000429895 KCNK1O00180 336 aa15.7■□□□□ 0.1
PTPRF-206ENST00000429895 TRIM24O15164 1050 aa15.7■□□□□ 0.1
PTPRF-206ENST00000429895 ACADSP16219 412 aa15.7■□□□□ 0.1
PTPRF-206ENST00000429895 MAGEA10P43363 369 aaPredicted RBP15.7■□□□□ 0.1
PTPRF-206ENST00000429895 CCNG2Q16589 344 aa15.7■□□□□ 0.1
PTPRF-206ENST00000429895 CYP2W1Q8TAV3 490 aa15.7■□□□□ 0.1
PTPRF-206ENST00000429895 MTFR1LQ9H019 292 aa15.7■□□□□ 0.1
PTPRF-206ENST00000429895 UXTQ9UBK9 157 aaPredicted RBP15.7■□□□□ 0.1
PTPRF-206ENST00000429895 LIMD1Q9UGP4 676 aa15.7■□□□□ 0.1
PTPRF-206ENST00000429895 MANSC4A6NHS7 340 aaPredicted RBP15.7■□□□□ 0.1
PTPRF-206ENST00000429895 SMIM22K7EJ46 135 aa15.7■□□□□ 0.1
PTPRF-206ENST00000429895 IL1R1P14778 569 aa15.7■□□□□ 0.1
PTPRF-206ENST00000429895 THOP1P52888 689 aa15.7■□□□□ 0.1
PTPRF-206ENST00000429895 PREPLQ4J6C6 727 aaPredicted RBP15.7■□□□□ 0.1
PTPRF-206ENST00000429895 FOXR1Q6PIV2 292 aa15.7■□□□□ 0.1
PTPRF-206ENST00000429895 KIAA1324Q6UXG2 1013 aaKnown RBP15.7■□□□□ 0.1
PTPRF-206ENST00000429895 MCOLN2Q8IZK6 566 aa15.7■□□□□ 0.1
PTPRF-206ENST00000429895 METTL6Q8TCB7 284 aa15.7■□□□□ 0.1
PTPRF-206ENST00000429895 CDCA5Q96FF9 252 aa15.7■□□□□ 0.1
PTPRF-206ENST00000429895 REXO4Q9GZR2 422 aaKnown RBP15.7■□□□□ 0.1
PTPRF-206ENST00000429895 TAS2R13Q9NYV9 303 aa15.7■□□□□ 0.1
PTPRF-206ENST00000429895 TRPV2Q9Y5S1 764 aa15.7■□□□□ 0.1
PTPRF-206ENST00000429895 IFNA16P05015 189 aa15.7■□□□□ 0.1
PTPRF-206ENST00000429895 RARGP13631 454 aa15.7■□□□□ 0.1
PTPRF-206ENST00000429895 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.7■□□□□ 0.1
PTPRF-206ENST00000429895 ACVR2BQ13705 512 aa15.7■□□□□ 0.1
PTPRF-206ENST00000429895 ZNF621Q6ZSS3 439 aa15.7■□□□□ 0.1
PTPRF-206ENST00000429895 SH3BP5LQ7L8J4 393 aa15.7■□□□□ 0.1
PTPRF-206ENST00000429895 COLGALT2Q8IYK4 626 aa15.7■□□□□ 0.1
PTPRF-206ENST00000429895 ADAM2Q99965 735 aa15.7■□□□□ 0.1
PTPRF-206ENST00000429895 RIBC2Q9H4K1 309 aa15.7■□□□□ 0.1
PTPRF-206ENST00000429895 SESN1Q9Y6P5 492 aa15.7■□□□□ 0.1
PTPRF-206ENST00000429895 MAGEB16A2A368 324 aa15.7■□□□□ 0.1
PTPRF-206ENST00000429895 HS6ST1O60243 411 aa15.7■□□□□ 0.1
PTPRF-206ENST00000429895 PGAM1P18669 254 aa15.7■□□□□ 0.1
PTPRF-206ENST00000429895 CALB2P22676 271 aa15.7■□□□□ 0.1
PTPRF-206ENST00000429895 CBWD6Q4V339 395 aa15.7■□□□□ 0.1
PTPRF-206ENST00000429895 TAF2Q6P1X5 1199 aa15.7■□□□□ 0.1
PTPRF-206ENST00000429895 ADGRA1Q86SQ6 560 aa15.7■□□□□ 0.1
PTPRF-206ENST00000429895 FBXO25Q8TCJ0 367 aa15.7■□□□□ 0.1
PTPRF-206ENST00000429895 INPP4BO15327 924 aa15.7■□□□□ 0.1
PTPRF-206ENST00000429895 GZMAP12544 262 aa15.7■□□□□ 0.1
PTPRF-206ENST00000429895 PAICSP22234 425 aaKnown RBP15.7■□□□□ 0.1
PTPRF-206ENST00000429895 MCL1Q07820 350 aa15.7■□□□□ 0.1
PTPRF-206ENST00000429895 MAD2L1Q13257 205 aaPredicted RBP15.7■□□□□ 0.1
PTPRF-206ENST00000429895 ZNF618Q5T7W0 954 aa15.7■□□□□ 0.1
PTPRF-206ENST00000429895 ARMC12Q5T9G4 340 aa15.7■□□□□ 0.1
PTPRF-206ENST00000429895 PPP2R3BQ9Y5P8 575 aa15.7■□□□□ 0.1
PTPRF-206ENST00000429895 RPN2P04844 631 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 AMD1P17707 334 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 LBPP18428 481 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 PRKAG1P54619 331 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 FASTKQ14296 549 aaKnown RBP15.69■□□□□ 0.1
PTPRF-206ENST00000429895 OR56A4Q8NGH8 313 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 SLC5A5Q92911 643 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 REPS1Q96D71 796 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 C19orf60Q96EN9 201 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 TCF7L2Q9NQB0 619 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 MRPS35P82673 323 aaKnown RBP15.69■□□□□ 0.1
PTPRF-206ENST00000429895 PPIL2Q13356 520 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 ITIH4Q14624 930 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 PLEKHA7Q6IQ23 1121 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 FAM20CQ8IXL6 584 aa15.69■□□□□ 0.1
PTPRF-206ENST00000429895 ZBTB45Q96K62 511 aaPredicted RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms