RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 SCAMP3O14828 347 aaKnown RBP17.6■□□□□ 0.41
LINC00887-203ENST00000429578 DAPK3O43293 454 aa17.6■□□□□ 0.41
LINC00887-203ENST00000429578 MBTPS2O43462 519 aa17.6■□□□□ 0.41
LINC00887-203ENST00000429578 EPHB2P29323 1055 aa17.6■□□□□ 0.41
LINC00887-203ENST00000429578 PAFAH1B1P43034 410 aa17.6■□□□□ 0.41
LINC00887-203ENST00000429578 ADCY2Q08462 1091 aa17.6■□□□□ 0.41
LINC00887-203ENST00000429578 KLF1Q13351 362 aaPredicted RBP17.6■□□□□ 0.41
LINC00887-203ENST00000429578 DPYSQ14117 519 aa17.6■□□□□ 0.41
LINC00887-203ENST00000429578 C5orf22Q49AR2 442 aa17.6■□□□□ 0.41
LINC00887-203ENST00000429578 RFX6Q8HWS3 928 aa17.6■□□□□ 0.41
LINC00887-203ENST00000429578 TBC1D31Q96DN5 1066 aa17.6■□□□□ 0.41
LINC00887-203ENST00000429578 PRDM16Q9HAZ2 1276 aa17.6■□□□□ 0.41
LINC00887-203ENST00000429578 ARHGEF4Q9NR80 690 aa17.6■□□□□ 0.41
LINC00887-203ENST00000429578 PRKAG3Q9UGI9 489 aa17.6■□□□□ 0.41
LINC00887-203ENST00000429578 FGF10O15520 208 aaPredicted RBP17.59■□□□□ 0.41
LINC00887-203ENST00000429578 CST8O60676 142 aa17.59■□□□□ 0.41
LINC00887-203ENST00000429578 COL9A1P20849 921 aa17.59■□□□□ 0.41
LINC00887-203ENST00000429578 AMPD1P23109 780 aa17.59■□□□□ 0.41
LINC00887-203ENST00000429578 FCARP24071 287 aa17.59■□□□□ 0.41
LINC00887-203ENST00000429578 CHKAP35790 457 aa17.59■□□□□ 0.41
LINC00887-203ENST00000429578 VIPR2P41587 438 aa17.59■□□□□ 0.41
LINC00887-203ENST00000429578 TFDP2Q14188 446 aa17.59■□□□□ 0.41
LINC00887-203ENST00000429578 WHAMMP3Q1A5X7 153 aa17.59■□□□□ 0.41
LINC00887-203ENST00000429578 LONRF2Q1L5Z9 754 aa17.59■□□□□ 0.41
LINC00887-203ENST00000429578 SLC9A4Q6AI14 798 aa17.59■□□□□ 0.41
LINC00887-203ENST00000429578 RWDD4Q6NW29 188 aaKnown RBP17.59■□□□□ 0.41
LINC00887-203ENST00000429578 RFWD3Q6PCD5 774 aa17.59■□□□□ 0.41
LINC00887-203ENST00000429578 OTOP3Q7RTS5 596 aa17.59■□□□□ 0.41
LINC00887-203ENST00000429578 LGI2Q8N0V4 545 aa17.59■□□□□ 0.41
LINC00887-203ENST00000429578 CPXM2Q8N436 756 aa17.59■□□□□ 0.41
LINC00887-203ENST00000429578 PQLC3Q8N755 202 aa17.59■□□□□ 0.41
LINC00887-203ENST00000429578 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.59■□□□□ 0.41
LINC00887-203ENST00000429578 E2F7Q96AV8 911 aa17.59■□□□□ 0.41
LINC00887-203ENST00000429578 RSPRY1Q96DX4 576 aa17.59■□□□□ 0.41
LINC00887-203ENST00000429578 ZYG11BQ9C0D3 744 aa17.59■□□□□ 0.41
LINC00887-203ENST00000429578 CATSPERBQ9H7T0 1116 aa17.59■□□□□ 0.41
LINC00887-203ENST00000429578 L2HGDHQ9H9P8 463 aa17.59■□□□□ 0.41
LINC00887-203ENST00000429578 ZFP14Q9HCL3 533 aa17.59■□□□□ 0.41
LINC00887-203ENST00000429578 TBC1D14Q9P2M4 693 aa17.59■□□□□ 0.41
LINC00887-203ENST00000429578 DRGXA6NNA5 263 aa17.58■□□□□ 0.41
LINC00887-203ENST00000429578 ERCC2P18074 760 aa17.58■□□□□ 0.41
LINC00887-203ENST00000429578 SMAD2Q15796 467 aaKnown RBP17.58■□□□□ 0.41
LINC00887-203ENST00000429578 BBS12Q6ZW61 710 aa17.58■□□□□ 0.41
LINC00887-203ENST00000429578 BPIFB1Q8TDL5 484 aa17.58■□□□□ 0.41
LINC00887-203ENST00000429578 MAIP1Q8WWC4 291 aa17.58■□□□□ 0.41
LINC00887-203ENST00000429578 IGSF8Q969P0 613 aa17.58■□□□□ 0.41
LINC00887-203ENST00000429578 OTUB2Q96DC9 234 aa17.58■□□□□ 0.41
LINC00887-203ENST00000429578 RPRD1AQ96P16 312 aaPredicted RBP17.58■□□□□ 0.41
LINC00887-203ENST00000429578 LRRC3BQ96PB8 259 aa17.58■□□□□ 0.41
LINC00887-203ENST00000429578 SMARCAL1Q9NZC9 954 aa17.58■□□□□ 0.41
LINC00887-203ENST00000429578 TCRBV7S2A1N4TA0A589 114 aa17.58■□□□□ 0.4
LINC00887-203ENST00000429578 PDE2AO00408 941 aaPredicted RBP17.58■□□□□ 0.4
LINC00887-203ENST00000429578 GFRA2O00451 464 aa17.58■□□□□ 0.4
LINC00887-203ENST00000429578 SLC9A3R1O14745 358 aaPredicted RBP17.58■□□□□ 0.4
LINC00887-203ENST00000429578 APOL1O14791 398 aa17.58■□□□□ 0.4
LINC00887-203ENST00000429578 DCLK1O15075 740 aa17.58■□□□□ 0.4
LINC00887-203ENST00000429578 ZFXP17010 805 aaPredicted RBP17.58■□□□□ 0.4
LINC00887-203ENST00000429578 ZP2Q05996 745 aa17.58■□□□□ 0.4
LINC00887-203ENST00000429578 CKAP4Q07065 602 aaKnown RBP17.58■□□□□ 0.4
LINC00887-203ENST00000429578 RABGAP1LQ5R372 815 aa17.58■□□□□ 0.4
LINC00887-203ENST00000429578 ADHFE1Q8IWW8 467 aa17.58■□□□□ 0.4
LINC00887-203ENST00000429578 PLD5Q8N7P1 536 aa17.58■□□□□ 0.4
LINC00887-203ENST00000429578 MYEOVQ96EZ4 313 aa17.58■□□□□ 0.4
LINC00887-203ENST00000429578 PRICKLE1Q96MT3 831 aaPredicted RBP17.58■□□□□ 0.4
LINC00887-203ENST00000429578 MPP6Q9NZW5 540 aa17.58■□□□□ 0.4
LINC00887-203ENST00000429578 NYNRINQ9P2P1 1898 aaKnown RBP17.58■□□□□ 0.4
LINC00887-203ENST00000429578 MYO10Q9HD67 2058 aa17.57■□□□□ 0.4
LINC00887-203ENST00000429578 MIA3Q5JRA6 1907 aa17.57■□□□□ 0.4
LINC00887-203ENST00000429578 HEPACAM2A8MVW5 462 aa17.57■□□□□ 0.4
LINC00887-203ENST00000429578 DYNLT1P63172 113 aa17.57■□□□□ 0.4
LINC00887-203ENST00000429578 NCBP2-AS2Q69YL0 99 aa17.57■□□□□ 0.4
LINC00887-203ENST00000429578 TANGO2Q6ICL3 276 aa17.57■□□□□ 0.4
LINC00887-203ENST00000429578 ADAT2Q7Z6V5 191 aaKnown RBP17.57■□□□□ 0.4
LINC00887-203ENST00000429578 RETREG1Q9H6L5 497 aa17.57■□□□□ 0.4
LINC00887-203ENST00000429578 ETNK2Q9NVF9 386 aa17.57■□□□□ 0.4
LINC00887-203ENST00000429578 EPS15L1Q9UBC2 864 aa17.57■□□□□ 0.4
LINC00887-203ENST00000429578 BDP1A6H8Y1 2624 aa17.57■□□□□ 0.4
LINC00887-203ENST00000429578 WASH4PA8MWX3 477 aa17.56■□□□□ 0.4
LINC00887-203ENST00000429578 APOC4-APOC2K7ER74 178 aa17.56■□□□□ 0.4
LINC00887-203ENST00000429578 TRDMT1O14717 391 aaKnown RBP17.56■□□□□ 0.4
LINC00887-203ENST00000429578 APOC2P02655 101 aa17.56■□□□□ 0.4
LINC00887-203ENST00000429578 RHOQP17081 205 aa17.56■□□□□ 0.4
LINC00887-203ENST00000429578 TGM2P21980 687 aa17.56■□□□□ 0.4
LINC00887-203ENST00000429578 IRAK1P51617 712 aa17.56■□□□□ 0.4
LINC00887-203ENST00000429578 VCPP55072 806 aaKnown RBP17.56■□□□□ 0.4
LINC00887-203ENST00000429578 SIX1Q15475 284 aaPredicted RBP17.56■□□□□ 0.4
LINC00887-203ENST00000429578 ALFQ53S48 1182 aa17.56■□□□□ 0.4
LINC00887-203ENST00000429578 TTC39BQ5VTQ0 682 aaPredicted RBP17.56■□□□□ 0.4
LINC00887-203ENST00000429578 TMCO3Q6UWJ1 677 aa17.56■□□□□ 0.4
LINC00887-203ENST00000429578 ZDHHC14Q8IZN3 488 aa17.56■□□□□ 0.4
LINC00887-203ENST00000429578 CFAP52Q8N1V2 620 aa17.56■□□□□ 0.4
LINC00887-203ENST00000429578 TDRD5Q8NAT2 981 aaKnown RBP17.56■□□□□ 0.4
LINC00887-203ENST00000429578 OSCP1Q8WVF1 389 aa17.56■□□□□ 0.4
LINC00887-203ENST00000429578 ELSPBP1Q96BH3 223 aa17.56■□□□□ 0.4
LINC00887-203ENST00000429578 TMEM248Q9NWD8 314 aa17.56■□□□□ 0.4
LINC00887-203ENST00000429578 DONSONQ9NYP3 566 aa17.56■□□□□ 0.4
LINC00887-203ENST00000429578 TYW5A2RUC4 315 aaKnown RBP17.55■□□□□ 0.4
LINC00887-203ENST00000429578 TSPAN3O60637 253 aa17.55■□□□□ 0.4
LINC00887-203ENST00000429578 CNTN5O94779 1100 aa17.55■□□□□ 0.4
LINC00887-203ENST00000429578 SGSHP51688 502 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms