RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 TSHRP16473 764 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 NT5DC1Q5TFE4 455 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 C19orf18Q8NEA5 215 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 PPP1R16AQ96I34 528 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 POP1Q99575 1024 aaKnown RBP13.06□□□□□ -0.32
LDB3-205ENST00000429277 A1CFQ9NQ94 594 aaKnown RBP13.06□□□□□ -0.32
LDB3-205ENST00000429277 ABCC13Q9NSE7 274 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.06□□□□□ -0.32
LDB3-205ENST00000429277 TPRKBQ9Y3C4 175 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 ABCA9Q8IUA7 1624 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 CCDC189A1A4V9 331 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 MTA2O94776 668 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 MICAL2O94851 1124 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 GPR15P49685 360 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 NTRK3Q16288 839 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 DHFR2Q86XF0 187 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 MIER2Q8N344 545 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 NRDE2Q9H7Z3 1164 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 SETD4Q9NVD3 440 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 SORCS3Q9UPU3 1222 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 TAF6LQ9Y6J9 622 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 CEP152O94986 1710 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 LDLRP01130 860 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 FAM58BPP0C7Q3 252 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 UQCRBP14927 111 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 KLRK1P26718 216 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 ELK3P41970 407 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 PPATQ06203 517 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 CRYMQ14894 314 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 SAMD4BQ5PRF9 694 aaKnown RBP13.05□□□□□ -0.32
LDB3-205ENST00000429277 NKX2-3Q8TAU0 364 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 FAM163AQ96GL9 167 aaPredicted RBP13.05□□□□□ -0.32
LDB3-205ENST00000429277 POLR1EQ9GZS1 481 aaKnown RBP13.05□□□□□ -0.32
LDB3-205ENST00000429277 HPS4Q9NQG7 708 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 DNPEPQ9ULA0 475 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 QSOX1O00391 747 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 KPNA5O15131 536 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 PAICSP22234 425 aaKnown RBP13.05□□□□□ -0.32
LDB3-205ENST00000429277 POU6F1Q14863 301 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 SLC9A5Q14940 896 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 SLC44A4Q53GD3 710 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 ARMC12Q5T9G4 340 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 NEK10Q6ZWH5 1172 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 PNMA8CA0A1B0GUJ8 204 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 DDTLA6NHG4 134 aaPredicted RBP13.05□□□□□ -0.32
LDB3-205ENST00000429277 PDHXO00330 501 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 ZBTB14O43829 449 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 MSCO60682 206 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 MAP3K6O95382 1288 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 TNNI3P19429 210 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 SERPINA4P29622 427 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 CXCL9Q07325 125 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 PARP6Q2NL67 630 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 CDC73Q6P1J9 531 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 OTOP1Q7RTM1 612 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 GLT6D1Q7Z4J2 308 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 NECAB2Q7Z6G3 386 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 MILR1Q7Z6M3 343 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 KATNAL2Q8IYT4 538 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 MOSPD2Q8NHP6 518 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 WDR36Q8NI36 951 aaKnown RBP13.05□□□□□ -0.32
LDB3-205ENST00000429277 TSPAN18Q96SJ8 248 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 SAR1AQ9NR31 198 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 LRRC4BQ9NT99 713 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 AKAP7Q9P0M2 348 aaPredicted RBP13.05□□□□□ -0.32
LDB3-205ENST00000429277 DUSP12Q9UNI6 340 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 E9PCH4 1651 aa13.05□□□□□ -0.32
LDB3-205ENST00000429277 A0A096LPK6 155 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 SMIM31A0A1B0GVY4 71 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 DGKAP23743 735 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 PIK3R1P27986 724 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 GRIK3Q13003 919 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 BTG3Q14201 252 aaPredicted RBP13.04□□□□□ -0.32
LDB3-205ENST00000429277 OASLQ15646 514 aaKnown RBP13.04□□□□□ -0.32
LDB3-205ENST00000429277 ALFQ53S48 1182 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 USP45Q70EL2 814 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 DLG3Q92796 817 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 KAT2BQ92831 832 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 LACRTQ9GZZ8 138 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 SPG21Q9NZD8 308 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 TMEM216Q9P0N5 145 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 SH3BP4Q9P0V3 963 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 GTF2A1LQ9UNN4 478 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 CCDC154A6NI56 674 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 OPLAHO14841 1288 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 PDE5AO76074 875 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 CXCR2P25025 360 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 SHMT1P34896 483 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 PSEN1P49768 467 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 PSEN2P49810 448 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 TSNQ15631 228 aaKnown RBP13.04□□□□□ -0.32
LDB3-205ENST00000429277 FNDC5Q8NAU1 212 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 ANKRD49Q8WVL7 239 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 ATL1Q8WXF7 558 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 SLITRK2Q9H156 845 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 SERHL2Q9H4I8 314 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 SERHLQ9NQF3 203 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 STX11O75558 287 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 LTFP02788 710 aa13.04□□□□□ -0.32
LDB3-205ENST00000429277 CATP04040 527 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms