RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 TCF4P15884 667 aa23.03■■□□□ 1.28
PTPN18-205ENST00000428843 KRT83P78385 493 aa23.03■■□□□ 1.28
PTPN18-205ENST00000428843 NRG1Q02297 640 aaPredicted RBP23.03■■□□□ 1.28
PTPN18-205ENST00000428843 LRRC32Q14392 662 aa23.03■■□□□ 1.28
PTPN18-205ENST00000428843 MESDQ14696 234 aa23.03■■□□□ 1.28
PTPN18-205ENST00000428843 CYP4V2Q6ZWL3 525 aaPredicted RBP23.03■■□□□ 1.28
PTPN18-205ENST00000428843 CPNE8Q86YQ8 564 aa23.03■■□□□ 1.28
PTPN18-205ENST00000428843 MFN1Q8IWA4 741 aa23.03■■□□□ 1.28
PTPN18-205ENST00000428843 PYROXD2Q8N2H3 581 aa23.03■■□□□ 1.28
PTPN18-205ENST00000428843 CARNMT1Q8N4J0 409 aa23.03■■□□□ 1.28
PTPN18-205ENST00000428843 TMEM105Q8N8V8 129 aa23.03■■□□□ 1.28
PTPN18-205ENST00000428843 DESI2Q9BSY9 194 aa23.03■■□□□ 1.28
PTPN18-205ENST00000428843 SNRNP25Q9BV90 132 aaKnown RBP23.03■■□□□ 1.28
PTPN18-205ENST00000428843 GPATCH2LQ9NWQ4 482 aa23.03■■□□□ 1.28
PTPN18-205ENST00000428843 DLGAP2Q9P1A6 1054 aa23.03■■□□□ 1.28
PTPN18-205ENST00000428843 LCMT1Q9UIC8 334 aa23.03■■□□□ 1.28
PTPN18-205ENST00000428843 SLC27A6Q9Y2P4 619 aa23.03■■□□□ 1.28
PTPN18-205ENST00000428843 ATG2BQ96BY7 2078 aa23.02■■□□□ 1.28
PTPN18-205ENST00000428843 CUL9Q8IWT3 2517 aa23.02■■□□□ 1.28
PTPN18-205ENST00000428843 IGLV3-10A0A075B6K4 115 aa23.02■■□□□ 1.28
PTPN18-205ENST00000428843 A0A1B0GVM2 712 aa23.02■■□□□ 1.28
PTPN18-205ENST00000428843 TBC1D3BA6NDS4 549 aa23.02■■□□□ 1.28
PTPN18-205ENST00000428843 TCAF2A6NFQ2 919 aa23.02■■□□□ 1.28
PTPN18-205ENST00000428843 DRGXA6NNA5 263 aa23.02■■□□□ 1.28
PTPN18-205ENST00000428843 TMEM110-MUSTN1A8MSY1 372 aa23.02■■□□□ 1.28
PTPN18-205ENST00000428843 FAM72CH0Y354 149 aa23.02■■□□□ 1.28
PTPN18-205ENST00000428843 IL1R2P27930 398 aa23.02■■□□□ 1.28
PTPN18-205ENST00000428843 VAV2P52735 878 aa23.02■■□□□ 1.28
PTPN18-205ENST00000428843 ERMARDQ5T6L9 678 aa23.02■■□□□ 1.28
PTPN18-205ENST00000428843 FAM72AQ5TYM5 149 aa23.02■■□□□ 1.28
PTPN18-205ENST00000428843 MANEALQ5VSG8 457 aa23.02■■□□□ 1.28
PTPN18-205ENST00000428843 FAM72DQ6L9T8 149 aa23.02■■□□□ 1.28
PTPN18-205ENST00000428843 FAM72BQ86X60 149 aa23.02■■□□□ 1.28
PTPN18-205ENST00000428843 CCAR2Q8N163 923 aaKnown RBP23.02■■□□□ 1.28
PTPN18-205ENST00000428843 FIBINQ8TAL6 211 aa23.02■■□□□ 1.28
PTPN18-205ENST00000428843 LRFN3Q9BTN0 628 aa23.02■■□□□ 1.28
PTPN18-205ENST00000428843 ABCB8Q9NUT2 735 aa23.02■■□□□ 1.28
PTPN18-205ENST00000428843 AP4E1Q9UPM8 1137 aa23.02■■□□□ 1.28
PTPN18-205ENST00000428843 KMT2EQ8IZD2 1858 aa23.02■■□□□ 1.28
PTPN18-205ENST00000428843 A0A0A6YYK5 440 aaPredicted RBP23.01■■□□□ 1.27
PTPN18-205ENST00000428843 H0Y626 953 aa23.01■■□□□ 1.27
PTPN18-205ENST00000428843 ARHGAP6O43182 974 aa23.01■■□□□ 1.27
PTPN18-205ENST00000428843 CNTN5O94779 1100 aa23.01■■□□□ 1.27
PTPN18-205ENST00000428843 HLA-FP30511 346 aa23.01■■□□□ 1.27
PTPN18-205ENST00000428843 ARHGAP25P42331 645 aa23.01■■□□□ 1.27
PTPN18-205ENST00000428843 TNFRSF4P43489 277 aa23.01■■□□□ 1.27
PTPN18-205ENST00000428843 NOP2P46087 812 aaKnown RBP23.01■■□□□ 1.27
PTPN18-205ENST00000428843 RPS9P46781 194 aaKnown RBP23.01■■□□□ 1.27
PTPN18-205ENST00000428843 CCZ1BP86790 482 aa23.01■■□□□ 1.27
PTPN18-205ENST00000428843 CCZ1P86791 482 aaPredicted RBP23.01■■□□□ 1.27
PTPN18-205ENST00000428843 CDH18Q13634 790 aa23.01■■□□□ 1.27
PTPN18-205ENST00000428843 GEN1Q17RS7 908 aa23.01■■□□□ 1.27
PTPN18-205ENST00000428843 FBXO43Q4G163 708 aa23.01■■□□□ 1.27
PTPN18-205ENST00000428843 ALFQ53S48 1182 aa23.01■■□□□ 1.27
PTPN18-205ENST00000428843 Q6ZS52 159 aa23.01■■□□□ 1.27
PTPN18-205ENST00000428843 KIAA1328Q86T90 577 aa23.01■■□□□ 1.27
PTPN18-205ENST00000428843 CCDC117Q8IWD4 279 aaPredicted RBP23.01■■□□□ 1.27
PTPN18-205ENST00000428843 ZNF557Q8N988 423 aaPredicted RBP23.01■■□□□ 1.27
PTPN18-205ENST00000428843 PDLIM2Q96JY6 352 aa23.01■■□□□ 1.27
PTPN18-205ENST00000428843 MPP6Q9NZW5 540 aa23.01■■□□□ 1.27
PTPN18-205ENST00000428843 PPARGC1AQ9UBK2 798 aaKnown RBP23.01■■□□□ 1.27
PTPN18-205ENST00000428843 ANTXRLA6NF34 631 aa23■■□□□ 1.27
PTPN18-205ENST00000428843 PRRT4C9JH25 899 aa23■■□□□ 1.27
PTPN18-205ENST00000428843 LRIG2O94898 1065 aa23■■□□□ 1.27
PTPN18-205ENST00000428843 AVPR2P30518 371 aa23■■□□□ 1.27
PTPN18-205ENST00000428843 L1CAMP32004 1257 aa23■■□□□ 1.27
PTPN18-205ENST00000428843 MAN1A1P33908 653 aa23■■□□□ 1.27
PTPN18-205ENST00000428843 SSR1P43307 286 aaKnown RBP23■■□□□ 1.27
PTPN18-205ENST00000428843 HADHBP55084 474 aaKnown RBP23■■□□□ 1.27
PTPN18-205ENST00000428843 CDH4P55283 916 aa23■■□□□ 1.27
PTPN18-205ENST00000428843 SEC13P55735 322 aa23■■□□□ 1.27
PTPN18-205ENST00000428843 SLC25A11Q02978 314 aaKnown RBP23■■□□□ 1.27
PTPN18-205ENST00000428843 LMAN2Q12907 356 aa23■■□□□ 1.27
PTPN18-205ENST00000428843 CA9Q16790 459 aa23■■□□□ 1.27
PTPN18-205ENST00000428843 FSCBQ5H9T9 825 aa23■■□□□ 1.27
PTPN18-205ENST00000428843 NUDT18Q6ZVK8 323 aa23■■□□□ 1.27
PTPN18-205ENST00000428843 CHST9Q7L1S5 443 aa23■■□□□ 1.27
PTPN18-205ENST00000428843 ANKS1BQ7Z6G8 1248 aa23■■□□□ 1.27
PTPN18-205ENST00000428843 SYNPOQ8N3V7 929 aa23■■□□□ 1.27
PTPN18-205ENST00000428843 DDX51Q8N8A6 666 aaKnown RBP eCLIP23■■□□□ 1.27
PTPN18-205ENST00000428843 LMLNQ96KR4 655 aa23■■□□□ 1.27
PTPN18-205ENST00000428843 ZYG11BQ9C0D3 744 aa23■■□□□ 1.27
PTPN18-205ENST00000428843 LACRTQ9GZZ8 138 aa23■■□□□ 1.27
PTPN18-205ENST00000428843 DHX35Q9H5Z1 703 aaKnown RBP23■■□□□ 1.27
PTPN18-205ENST00000428843 ZWILCHQ9H900 591 aa23■■□□□ 1.27
PTPN18-205ENST00000428843 GGA2Q9UJY4 613 aa23■■□□□ 1.27
PTPN18-205ENST00000428843 NEU3Q9UQ49 428 aa23■■□□□ 1.27
PTPN18-205ENST00000428843 PJA2O43164 708 aa22.99■■□□□ 1.27
PTPN18-205ENST00000428843 RNF40O75150 1001 aa22.99■■□□□ 1.27
PTPN18-205ENST00000428843 CLDN11O75508 207 aa22.99■■□□□ 1.27
PTPN18-205ENST00000428843 PABPC1P11940 636 aaKnown RBP22.99■■□□□ 1.27
PTPN18-205ENST00000428843 CD70P32970 193 aa22.99■■□□□ 1.27
PTPN18-205ENST00000428843 MAGEA9P43362 315 aa22.99■■□□□ 1.27
PTPN18-205ENST00000428843 SEMA3BQ13214 749 aa22.99■■□□□ 1.27
PTPN18-205ENST00000428843 HADHQ16836 314 aaKnown RBP22.99■■□□□ 1.27
PTPN18-205ENST00000428843 SMTNL2Q2TAL5 461 aa22.99■■□□□ 1.27
PTPN18-205ENST00000428843 TXNRD3NBQ6F5E7 133 aa22.99■■□□□ 1.27
PTPN18-205ENST00000428843 KIAA0907Q7Z7F0 614 aaPredicted RBP22.99■■□□□ 1.27
PTPN18-205ENST00000428843 PSTKQ8IV42 348 aaKnown RBP22.99■■□□□ 1.27
PTPN18-205ENST00000428843 TBC1D31Q96DN5 1066 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms