RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 AVPR1AP37288 418 aa9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 GAD2Q05329 585 aa9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 DPYSL2Q16555 572 aa9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 EFHC2Q5JST6 749 aa9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 IER5LQ5T953 404 aa9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 NCBP2-AS2Q69YL0 99 aa9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 RFX8Q6ZV50 586 aa9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 CHSY1Q86X52 802 aa9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 NPAS3Q8IXF0 933 aa9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 CMTM8Q8IZV2 173 aa9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 EXD1Q8NHP7 514 aa9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 FGF14Q92915 247 aa9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 GUCD1Q96NT3 240 aa9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 SERPINB11Q96P15 392 aa9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 RPRD1AQ96P16 312 aaPredicted RBP9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 RNF157Q96PX1 679 aa9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 MYADMQ96S97 322 aa9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 KXD1Q9BQD3 176 aa9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 PLA2G2FQ9BZM2 168 aa9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 TTC7AQ9ULT0 858 aaPredicted RBP9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 LEFTY2O00292 366 aa9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 IFNB1P01574 187 aa9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 MYBL2P10244 700 aa9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 TPI1P60174 286 aa9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 FAM78AQ5JUQ0 283 aa9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 UBAP2Q5T6F2 1119 aaKnown RBP9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 PPP1R2P3Q6NXS1 205 aa9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 SND1Q7KZF4 910 aaKnown RBP eCLIP9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 ITIH5Q86UX2 942 aa9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 TMEM25Q86YD3 366 aa9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 RNF135Q8IUD6 432 aa9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 UNC45BQ8IWX7 931 aa9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 RASGEF1CQ8N431 466 aa9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 USP33Q8TEY7 942 aa9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 MAGOHBQ96A72 148 aaKnown RBP9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 RPGRIP1Q96KN7 1286 aa9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 CCDC114Q96M63 670 aa9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 SAMD11Q96NU1 681 aa9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 OXCT2Q9BYC2 517 aaPredicted RBP9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 DPH5Q9H2P9 285 aa9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 DNAJC17Q9NVM6 304 aaKnown RBP9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 ARHGEF38Q9NXL2 777 aa9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 ZFP37Q9Y6Q3 630 aaPredicted RBP9.82□□□□□ -0.84
HMGCLL1-206ENST00000428842 TCF20Q9UGU0 1960 aaKnown RBP9.81□□□□□ -0.84
HMGCLL1-206ENST00000428842 DFFAO00273 331 aa9.81□□□□□ -0.84
HMGCLL1-206ENST00000428842 ACVRL1P37023 503 aa9.81□□□□□ -0.84
HMGCLL1-206ENST00000428842 SCNN1AP37088 669 aa9.81□□□□□ -0.84
HMGCLL1-206ENST00000428842 CREMQ03060 361 aa9.81□□□□□ -0.84
HMGCLL1-206ENST00000428842 SEMA3BQ13214 749 aa9.81□□□□□ -0.84
HMGCLL1-206ENST00000428842 ADAM15Q13444 863 aa9.81□□□□□ -0.84
HMGCLL1-206ENST00000428842 TRIP4Q15650 581 aaPredicted RBP9.81□□□□□ -0.84
HMGCLL1-206ENST00000428842 SMAD1Q15797 465 aaKnown RBP9.81□□□□□ -0.84
HMGCLL1-206ENST00000428842 BOLA3Q53S33 107 aa9.81□□□□□ -0.84
HMGCLL1-206ENST00000428842 TANGO2Q6ICL3 276 aa9.81□□□□□ -0.84
HMGCLL1-206ENST00000428842 FAM43BQ6ZT52 329 aaPredicted RBP9.81□□□□□ -0.84
HMGCLL1-206ENST00000428842 RCOR2Q8IZ40 523 aa9.81□□□□□ -0.84
HMGCLL1-206ENST00000428842 FAM71DQ8N9W8 422 aa9.81□□□□□ -0.84
HMGCLL1-206ENST00000428842 EXOC4Q96A65 974 aa9.81□□□□□ -0.84
HMGCLL1-206ENST00000428842 DTLQ9NZJ0 730 aa9.81□□□□□ -0.84
HMGCLL1-206ENST00000428842 SEPT10Q9P0V9 454 aa9.81□□□□□ -0.84
HMGCLL1-206ENST00000428842 TTLL3Q9Y4R7 772 aa9.81□□□□□ -0.84
HMGCLL1-206ENST00000428842 ERICH4A6NGS2 130 aa9.81□□□□□ -0.84
HMGCLL1-206ENST00000428842 IGLV3-27P01718 113 aa9.81□□□□□ -0.84
HMGCLL1-206ENST00000428842 MLLT6P55198 1093 aaPredicted RBP9.81□□□□□ -0.84
HMGCLL1-206ENST00000428842 GPS2Q13227 327 aa9.81□□□□□ -0.84
HMGCLL1-206ENST00000428842 HP1BP3Q5SSJ5 553 aaPredicted RBP9.81□□□□□ -0.84
HMGCLL1-206ENST00000428842 ANKRD54Q6NXT1 300 aa9.81□□□□□ -0.84
HMGCLL1-206ENST00000428842 MSANTD2Q6P1R3 559 aa9.81□□□□□ -0.84
HMGCLL1-206ENST00000428842 CCDC137Q6PK04 289 aaKnown RBP9.81□□□□□ -0.84
HMGCLL1-206ENST00000428842 PARM1Q6UWI2 310 aa9.81□□□□□ -0.84
HMGCLL1-206ENST00000428842 LINGO4Q6UY18 593 aa9.81□□□□□ -0.84
HMGCLL1-206ENST00000428842 ARCQ7LC44 396 aa9.81□□□□□ -0.84
HMGCLL1-206ENST00000428842 KDELC2Q7Z4H8 507 aa9.81□□□□□ -0.84
HMGCLL1-206ENST00000428842 CCNYQ8ND76 341 aa9.81□□□□□ -0.84
HMGCLL1-206ENST00000428842 ACTRT1Q8TDG2 376 aa9.81□□□□□ -0.84
HMGCLL1-206ENST00000428842 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.81□□□□□ -0.84
HMGCLL1-206ENST00000428842 PGAP3Q96FM1 320 aaPredicted RBP9.81□□□□□ -0.84
HMGCLL1-206ENST00000428842 MAK16Q9BXY0 300 aaKnown RBP9.81□□□□□ -0.84
HMGCLL1-206ENST00000428842 EBF3Q9H4W6 596 aa9.81□□□□□ -0.84
HMGCLL1-206ENST00000428842 NOL6Q9H6R4 1146 aaKnown RBP9.81□□□□□ -0.84
HMGCLL1-206ENST00000428842 WDFY3Q8IZQ1 3526 aa9.81□□□□□ -0.84
HMGCLL1-206ENST00000428842 TARSL2A2RTX5 802 aaKnown RBP9.8□□□□□ -0.84
HMGCLL1-206ENST00000428842 XYLBO75191 536 aa9.8□□□□□ -0.84
HMGCLL1-206ENST00000428842 RBL1P28749 1068 aa9.8□□□□□ -0.84
HMGCLL1-206ENST00000428842 GBP1P32455 592 aa9.8□□□□□ -0.84
HMGCLL1-206ENST00000428842 GBP2P32456 591 aaPredicted RBP9.8□□□□□ -0.84
HMGCLL1-206ENST00000428842 PAFAH1B1P43034 410 aa9.8□□□□□ -0.84
HMGCLL1-206ENST00000428842 CKAP4Q07065 602 aaKnown RBP9.8□□□□□ -0.84
HMGCLL1-206ENST00000428842 DPYSQ14117 519 aa9.8□□□□□ -0.84
HMGCLL1-206ENST00000428842 CASP8Q14790 479 aa9.8□□□□□ -0.84
HMGCLL1-206ENST00000428842 ZNF354CQ86Y25 554 aa9.8□□□□□ -0.84
HMGCLL1-206ENST00000428842 ZNF683Q8IZ20 524 aa9.8□□□□□ -0.84
HMGCLL1-206ENST00000428842 SCML4Q8N228 414 aa9.8□□□□□ -0.84
HMGCLL1-206ENST00000428842 SORCS1Q8WY21 1168 aa9.8□□□□□ -0.84
HMGCLL1-206ENST00000428842 PBKQ96KB5 322 aa9.8□□□□□ -0.84
HMGCLL1-206ENST00000428842 S1PR5Q9H228 398 aa9.8□□□□□ -0.84
HMGCLL1-206ENST00000428842 TDP1Q9NUW8 608 aa9.8□□□□□ -0.84
HMGCLL1-206ENST00000428842 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.8□□□□□ -0.84
HMGCLL1-206ENST00000428842 GTSE1Q9NYZ3 720 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms