RNA–Protein interactions for RNA: ENST00000428634.1

PEX11B-202, Transcript of peroxisomal biogenesis factor 11 beta, humanhuman

TSL 2

Gene PEX11B, Length 667 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX11B-202ENST00000428634 RPGRIP1Q96KN7 1286 aa12.47□□□□□ -0.41
PEX11B-202ENST00000428634 TTC7AQ9ULT0 858 aaPredicted RBP12.47□□□□□ -0.41
PEX11B-202ENST00000428634 WNT6Q9Y6F9 365 aa12.47□□□□□ -0.41
PEX11B-202ENST00000428634 CDH23Q9H251 3354 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 A0A1B0GVM2 712 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 TCAF2A6NFQ2 919 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 WASH4PA8MWX3 477 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 ANHXE9PGG2 379 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 PGRMC1O00264 195 aaKnown RBP12.46□□□□□ -0.41
PEX11B-202ENST00000428634 TRDMT1O14717 391 aaKnown RBP12.46□□□□□ -0.41
PEX11B-202ENST00000428634 APOL1O14791 398 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 FANCGO15287 622 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 TSPAN3O60637 253 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 CST8O60676 142 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 CLDN11O75508 207 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 NFATC1O95644 943 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 ADH1CP00326 375 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 FGGP02679 453 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 ERCC2P18074 760 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 AMPD1P23109 780 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 IL4RP24394 825 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 MAPKAPK2P49137 400 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 FCHO2Q0JRZ9 810 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 NR1H3Q13133 447 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 HTR4Q13639 388 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 DPYSQ14117 519 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 LONRF2Q1L5Z9 754 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 MPP7Q5T2T1 576 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 AADACL2Q6P093 401 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 PARM1Q6UWI2 310 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 TMCO3Q6UWJ1 677 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 VITQ6UXI7 678 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 TPGS1Q6ZTW0 290 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 BZW1Q7L1Q6 419 aaKnown RBP12.46□□□□□ -0.41
PEX11B-202ENST00000428634 CHST9Q7L1S5 443 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 SLC13A5Q86YT5 568 aaPredicted RBP12.46□□□□□ -0.41
PEX11B-202ENST00000428634 ZNF683Q8IZ20 524 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 LZTR1Q8N653 840 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 ZNF557Q8N988 423 aaPredicted RBP12.46□□□□□ -0.41
PEX11B-202ENST00000428634 TTC13Q8NBP0 860 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 RIN3Q8TB24 985 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 ACTRT1Q8TDG2 376 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 DDI1Q8WTU0 396 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 COG1Q8WTW3 980 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 FGF14Q92915 247 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 IRF7Q92985 503 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 ATP2A3Q93084 1043 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 IGSF8Q969P0 613 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 LRRC3BQ96PB8 259 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 KXD1Q9BQD3 176 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 TRMT61BQ9BVS5 477 aaKnown RBP12.46□□□□□ -0.41
PEX11B-202ENST00000428634 HEMGNQ9BXL5 484 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 ARHGEF4Q9NR80 690 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 SPHK2Q9NRA0 654 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 IGSF9Q9P2J2 1179 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 THEGQ9P2T0 379 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 CDC23Q9UJX2 597 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 NUMBLQ9Y6R0 609 aa12.46□□□□□ -0.41
PEX11B-202ENST00000428634 BRWD1Q9NSI6 2320 aa12.45□□□□□ -0.42
PEX11B-202ENST00000428634 TRANK1O15050 2925 aa12.45□□□□□ -0.42
PEX11B-202ENST00000428634 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.45□□□□□ -0.42
PEX11B-202ENST00000428634 GFRA2O00451 464 aa12.45□□□□□ -0.42
PEX11B-202ENST00000428634 DCLK1O15075 740 aa12.45□□□□□ -0.42
PEX11B-202ENST00000428634 CHADO15335 359 aa12.45□□□□□ -0.42
PEX11B-202ENST00000428634 TBL1XO60907 577 aa12.45□□□□□ -0.42
PEX11B-202ENST00000428634 KRT10P13645 584 aa12.45□□□□□ -0.42
PEX11B-202ENST00000428634 TGM2P21980 687 aa12.45□□□□□ -0.42
PEX11B-202ENST00000428634 VCPP55072 806 aaKnown RBP12.45□□□□□ -0.42
PEX11B-202ENST00000428634 RPS24P62847 133 aaKnown RBP12.45□□□□□ -0.42
PEX11B-202ENST00000428634 GAD2Q05329 585 aa12.45□□□□□ -0.42
PEX11B-202ENST00000428634 CKAP4Q07065 602 aaKnown RBP12.45□□□□□ -0.42
PEX11B-202ENST00000428634 ZNF177Q13360 481 aaPredicted RBP12.45□□□□□ -0.42
PEX11B-202ENST00000428634 GRM2Q14416 872 aa12.45□□□□□ -0.42
PEX11B-202ENST00000428634 LLGL1Q15334 1064 aa12.45□□□□□ -0.42
PEX11B-202ENST00000428634 WHAMMP3Q1A5X7 153 aa12.45□□□□□ -0.42
PEX11B-202ENST00000428634 ANO4Q32M45 955 aa12.45□□□□□ -0.42
PEX11B-202ENST00000428634 EML3Q32P44 896 aa12.45□□□□□ -0.42
PEX11B-202ENST00000428634 SLC9A4Q6AI14 798 aa12.45□□□□□ -0.42
PEX11B-202ENST00000428634 BBS12Q6ZW61 710 aa12.45□□□□□ -0.42
PEX11B-202ENST00000428634 ADGRG2Q8IZP9 1017 aa12.45□□□□□ -0.42
PEX11B-202ENST00000428634 CPA6Q8N4T0 437 aa12.45□□□□□ -0.42
PEX11B-202ENST00000428634 RTL3Q8N8U3 475 aaKnown RBP12.45□□□□□ -0.42
PEX11B-202ENST00000428634 PCDH19Q8TAB3 1148 aa12.45□□□□□ -0.42
PEX11B-202ENST00000428634 CAPZA3Q96KX2 299 aa12.45□□□□□ -0.42
PEX11B-202ENST00000428634 PRICKLE1Q96MT3 831 aaPredicted RBP12.45□□□□□ -0.42
PEX11B-202ENST00000428634 LINC00597Q9H2U6 94 aa12.45□□□□□ -0.42
PEX11B-202ENST00000428634 TMEM248Q9NWD8 314 aa12.45□□□□□ -0.42
PEX11B-202ENST00000428634 MPP6Q9NZW5 540 aa12.45□□□□□ -0.42
PEX11B-202ENST00000428634 NUP210Q8TEM1 1887 aaPredicted RBP12.44□□□□□ -0.42
PEX11B-202ENST00000428634 GOLGA6L10A0A0M3HER8 536 aa12.44□□□□□ -0.42
PEX11B-202ENST00000428634 H0Y626 953 aa12.44□□□□□ -0.42
PEX11B-202ENST00000428634 APOC4-APOC2K7ER74 178 aa12.44□□□□□ -0.42
PEX11B-202ENST00000428634 ZNF185O15231 689 aa12.44□□□□□ -0.42
PEX11B-202ENST00000428634 CNTN5O94779 1100 aa12.44□□□□□ -0.42
PEX11B-202ENST00000428634 APOC2P02655 101 aa12.44□□□□□ -0.42
PEX11B-202ENST00000428634 IL9P15248 144 aa12.44□□□□□ -0.42
PEX11B-202ENST00000428634 GDI1P31150 447 aa12.44□□□□□ -0.42
PEX11B-202ENST00000428634 NR2C2P49116 596 aa12.44□□□□□ -0.42
PEX11B-202ENST00000428634 OXCT1P55809 520 aa12.44□□□□□ -0.42
PEX11B-202ENST00000428634 DYNLT1P63172 113 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms