RNA–Protein interactions for RNA: ENST00000427826.1

PHF1-204, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-204ENST00000427826 HLA-EP13747 358 aa15.69■□□□□ 0.1
PHF1-204ENST00000427826 CYP11B1P15538 503 aa15.69■□□□□ 0.1
PHF1-204ENST00000427826 GNSP15586 552 aa15.69■□□□□ 0.1
PHF1-204ENST00000427826 NOS2P35228 1153 aa15.69■□□□□ 0.1
PHF1-204ENST00000427826 OXCT1P55809 520 aa15.69■□□□□ 0.1
PHF1-204ENST00000427826 GFPT1Q06210 699 aaPredicted RBP15.69■□□□□ 0.1
PHF1-204ENST00000427826 SLC12A1Q13621 1099 aa15.69■□□□□ 0.1
PHF1-204ENST00000427826 PTPRNQ16849 979 aa15.69■□□□□ 0.1
PHF1-204ENST00000427826 PTPN20Q4JDL3 420 aa15.69■□□□□ 0.1
PHF1-204ENST00000427826 RABGAP1LQ5R372 815 aa15.69■□□□□ 0.1
PHF1-204ENST00000427826 CDKAL1Q5VV42 579 aa15.69■□□□□ 0.1
PHF1-204ENST00000427826 RAP1GAP2Q684P5 730 aa15.69■□□□□ 0.1
PHF1-204ENST00000427826 OLFML1Q6UWY5 402 aa15.69■□□□□ 0.1
PHF1-204ENST00000427826 SLC41A1Q8IVJ1 513 aa15.69■□□□□ 0.1
PHF1-204ENST00000427826 RGL4Q8IZJ4 473 aa15.69■□□□□ 0.1
PHF1-204ENST00000427826 CFAP52Q8N1V2 620 aa15.69■□□□□ 0.1
PHF1-204ENST00000427826 MSANTD4Q8NCY6 345 aa15.69■□□□□ 0.1
PHF1-204ENST00000427826 WFDC5Q8TCV5 224 aa15.69■□□□□ 0.1
PHF1-204ENST00000427826 PPP1R9BQ96SB3 815 aa15.69■□□□□ 0.1
PHF1-204ENST00000427826 TAB2Q9NYJ8 693 aa15.69■□□□□ 0.1
PHF1-204ENST00000427826 DAAM1Q9Y4D1 1078 aa15.69■□□□□ 0.1
PHF1-204ENST00000427826 NCOR2Q9Y618 2525 aa15.68■□□□□ 0.1
PHF1-204ENST00000427826 SYNJ2BP-COX16A0A087WUM0 186 aa15.68■□□□□ 0.1
PHF1-204ENST00000427826 CDX4O14627 284 aaPredicted RBP15.68■□□□□ 0.1
PHF1-204ENST00000427826 DAB1O75553 588 aa15.68■□□□□ 0.1
PHF1-204ENST00000427826 GRAP2O75791 330 aa15.68■□□□□ 0.1
PHF1-204ENST00000427826 SRPRAP08240 638 aaKnown RBP15.68■□□□□ 0.1
PHF1-204ENST00000427826 CDH5P33151 784 aaPredicted RBP15.68■□□□□ 0.1
PHF1-204ENST00000427826 SCNN1AP37088 669 aa15.68■□□□□ 0.1
PHF1-204ENST00000427826 CSKP41240 450 aa15.68■□□□□ 0.1
PHF1-204ENST00000427826 MATKP42679 507 aa15.68■□□□□ 0.1
PHF1-204ENST00000427826 GABRB2P47870 512 aa15.68■□□□□ 0.1
PHF1-204ENST00000427826 ATXN3P54252 364 aaPredicted RBP15.68■□□□□ 0.1
PHF1-204ENST00000427826 SFSWAPQ12872 951 aaKnown RBP15.68■□□□□ 0.1
PHF1-204ENST00000427826 STX1AQ16623 288 aa15.68■□□□□ 0.1
PHF1-204ENST00000427826 ERICH1Q86X53 443 aa15.68■□□□□ 0.1
PHF1-204ENST00000427826 ZNF677Q86XU0 584 aa15.68■□□□□ 0.1
PHF1-204ENST00000427826 C18orf8Q96DM3 657 aa15.68■□□□□ 0.1
PHF1-204ENST00000427826 GPR174Q9BXC1 333 aa15.68■□□□□ 0.1
PHF1-204ENST00000427826 PCED1AQ9H1Q7 454 aa15.68■□□□□ 0.1
PHF1-204ENST00000427826 VPS16Q9H269 839 aa15.68■□□□□ 0.1
PHF1-204ENST00000427826 PRSS16Q9NQE7 514 aa15.68■□□□□ 0.1
PHF1-204ENST00000427826 COX16Q9P0S2 106 aa15.68■□□□□ 0.1
PHF1-204ENST00000427826 XPO7Q9UIA9 1087 aaKnown RBP15.68■□□□□ 0.1
PHF1-204ENST00000427826 STAP1Q9ULZ2 295 aa15.68■□□□□ 0.1
PHF1-204ENST00000427826 PAXBP1Q9Y5B6 917 aa15.68■□□□□ 0.1
PHF1-204ENST00000427826 ATXN2Q99700 1313 aaKnown RBP15.68■□□□□ 0.1
PHF1-204ENST00000427826 NUP205Q92621 2012 aa15.67■□□□□ 0.1
PHF1-204ENST00000427826 MEI4A8MW99 385 aa15.67■□□□□ 0.1
PHF1-204ENST00000427826 F8VZ95 297 aa15.67■□□□□ 0.1
PHF1-204ENST00000427826 RNASEH1O60930 286 aaKnown RBP15.67■□□□□ 0.1
PHF1-204ENST00000427826 KCNK5O95279 499 aa15.67■□□□□ 0.1
PHF1-204ENST00000427826 F9P00740 461 aa15.67■□□□□ 0.1
PHF1-204ENST00000427826 DNTTP04053 509 aa15.67■□□□□ 0.1
PHF1-204ENST00000427826 SYPP08247 313 aa15.67■□□□□ 0.1
PHF1-204ENST00000427826 ENGP17813 658 aa15.67■□□□□ 0.1
PHF1-204ENST00000427826 PITX1P78337 314 aaPredicted RBP15.67■□□□□ 0.1
PHF1-204ENST00000427826 NME3Q13232 169 aa15.67■□□□□ 0.1
PHF1-204ENST00000427826 ARID5BQ14865 1188 aa15.67■□□□□ 0.1
PHF1-204ENST00000427826 KRT31Q15323 416 aa15.67■□□□□ 0.1
PHF1-204ENST00000427826 PITRM1Q5JRX3 1037 aa15.67■□□□□ 0.1
PHF1-204ENST00000427826 ACBD5Q5T8D3 534 aaPredicted RBP15.67■□□□□ 0.1
PHF1-204ENST00000427826 RNF219Q5W0B1 726 aaPredicted RBP15.67■□□□□ 0.1
PHF1-204ENST00000427826 SND1Q7KZF4 910 aaKnown RBP eCLIP15.67■□□□□ 0.1
PHF1-204ENST00000427826 DNASE2BQ8WZ79 361 aa15.67■□□□□ 0.1
PHF1-204ENST00000427826 MYEOVQ96EZ4 313 aa15.67■□□□□ 0.1
PHF1-204ENST00000427826 PRMT1Q99873 361 aaKnown RBP15.67■□□□□ 0.1
PHF1-204ENST00000427826 CAPN10Q9HC96 672 aa15.67■□□□□ 0.1
PHF1-204ENST00000427826 CD93Q9NPY3 652 aa15.67■□□□□ 0.1
PHF1-204ENST00000427826 FANCLQ9NW38 375 aa15.67■□□□□ 0.1
PHF1-204ENST00000427826 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.67■□□□□ 0.1
PHF1-204ENST00000427826 SCML1Q9UN30 329 aa15.67■□□□□ 0.1
PHF1-204ENST00000427826 LAMA1P25391 3075 aa15.66■□□□□ 0.1
PHF1-204ENST00000427826 A0A1B0GVM2 712 aa15.66■□□□□ 0.1
PHF1-204ENST00000427826 TCAF2A6NFQ2 919 aa15.66■□□□□ 0.1
PHF1-204ENST00000427826 M0QYT0 321 aa15.66■□□□□ 0.1
PHF1-204ENST00000427826 ARHGAP33O14559 1287 aa15.66■□□□□ 0.1
PHF1-204ENST00000427826 CSRP1P21291 193 aaKnown RBP15.66■□□□□ 0.1
PHF1-204ENST00000427826 MAPK8P45983 427 aa15.66■□□□□ 0.1
PHF1-204ENST00000427826 ECT2LQ008S8 904 aa15.66■□□□□ 0.1
PHF1-204ENST00000427826 MYL5Q02045 173 aa15.66■□□□□ 0.1
PHF1-204ENST00000427826 SULT2A1Q06520 285 aa15.66■□□□□ 0.1
PHF1-204ENST00000427826 HNRNPA1L2Q32P51 320 aaKnown RBP15.66■□□□□ 0.1
PHF1-204ENST00000427826 UAP1L1Q3KQV9 507 aa15.66■□□□□ 0.1
PHF1-204ENST00000427826 TTC31Q49AM3 519 aaPredicted RBP15.66■□□□□ 0.1
PHF1-204ENST00000427826 FSCBQ5H9T9 825 aa15.66■□□□□ 0.1
PHF1-204ENST00000427826 CCDC183Q5T5S1 534 aa15.66■□□□□ 0.1
PHF1-204ENST00000427826 TAF3Q5VWG9 929 aa15.66■□□□□ 0.1
PHF1-204ENST00000427826 ZNF776Q68DI1 518 aaPredicted RBP15.66■□□□□ 0.1
PHF1-204ENST00000427826 ZNF366Q8N895 744 aa15.66■□□□□ 0.1
PHF1-204ENST00000427826 INTS6Q9UL03 887 aaKnown RBP15.66■□□□□ 0.1
PHF1-204ENST00000427826 ERVW-1Q9UQF0 538 aa15.66■□□□□ 0.1
PHF1-204ENST00000427826 SPTBN2O15020 2390 aa15.66■□□□□ 0.1
PHF1-204ENST00000427826 TARSL2A2RTX5 802 aaKnown RBP15.65■□□□□ 0.1
PHF1-204ENST00000427826 METTL12A8MUP2 240 aa15.65■□□□□ 0.1
PHF1-204ENST00000427826 CEACAM1P13688 526 aa15.65■□□□□ 0.1
PHF1-204ENST00000427826 CDK11BP21127 795 aaKnown RBP15.65■□□□□ 0.1
PHF1-204ENST00000427826 NNMTP40261 264 aa15.65■□□□□ 0.1
PHF1-204ENST00000427826 RNASE9P60153 205 aaKnown RBP15.65■□□□□ 0.1
PHF1-204ENST00000427826 POLR2FP61218 127 aaKnown RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms