RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 NIPAL4Q0D2K0 466 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 IFRD2Q12894 506 aaPredicted RBP11.93□□□□□ -0.5
FIRRE-201ENST00000427391 KHDC1Q4VXA5 237 aaKnown RBP11.93□□□□□ -0.5
FIRRE-201ENST00000427391 FASTKD1Q53R41 847 aaKnown RBP11.93□□□□□ -0.5
FIRRE-201ENST00000427391 SHKBP1Q8TBC3 707 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 NT5C3BQ969T7 300 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 NSL1Q96IY1 281 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 ZNF778Q96MU6 729 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 AGAP2Q99490 1192 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 SYT15Q9BQS2 421 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 RNPEPL1Q9HAU8 725 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 SAR1AQ9NR31 198 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 MTO1Q9Y2Z2 717 aaKnown RBP11.93□□□□□ -0.5
FIRRE-201ENST00000427391 RPS6KL1Q9Y6S9 549 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 F8W810 466 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 DCLK1O15075 740 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 GYG2O15488 501 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 XPOTO43592 962 aaKnown RBP11.93□□□□□ -0.5
FIRRE-201ENST00000427391 C6orf222P0C671 652 aaPredicted RBP11.93□□□□□ -0.5
FIRRE-201ENST00000427391 ESRRAP11474 423 aaPredicted RBP11.93□□□□□ -0.5
FIRRE-201ENST00000427391 AXLP30530 894 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 ARRB2P32121 409 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 CRHR1P34998 444 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 KDSRQ06136 332 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 UBAP2LQ14157 1087 aaKnown RBP11.93□□□□□ -0.5
FIRRE-201ENST00000427391 DLG2Q15700 870 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 LRRC8BQ6P9F7 803 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 ARCQ7LC44 396 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 FAM35AQ86V20 835 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 RASSF3Q86WH2 238 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 TOP6BLQ8N6T0 577 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 WDR60Q8WVS4 1066 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.93□□□□□ -0.5
FIRRE-201ENST00000427391 TRAFD1O14545 582 aaPredicted RBP11.93□□□□□ -0.5
FIRRE-201ENST00000427391 GSC2O15499 205 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 ZBTB24O43167 697 aaPredicted RBP11.93□□□□□ -0.5
FIRRE-201ENST00000427391 ATP9BO43861 1147 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 TGDSO95455 350 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 TPBGLP0DKB5 382 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 PTPN3P26045 913 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 SCNN1AP37088 669 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 FDFT1P37268 417 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 DAOAP59103 153 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 PDE1BQ01064 536 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 ZBTB17Q13105 803 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 PPP2R5DQ14738 602 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 KPNB1Q14974 876 aaKnown RBP11.93□□□□□ -0.5
FIRRE-201ENST00000427391 FSCN1Q16658 493 aaKnown RBP11.93□□□□□ -0.5
FIRRE-201ENST00000427391 CERCAMQ5T4B2 595 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 STEAP4Q687X5 459 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 CXCL17Q6UXB2 119 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 ACVR1CQ8NER5 493 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 PPP1R14CQ8TAE6 165 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 USP33Q8TEY7 942 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 CLPTM1LQ96KA5 538 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 BTBD10Q9BSF8 475 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 CAB39LQ9H9S4 337 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 LNPEPQ9UIQ6 1025 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 ST3GAL5Q9UNP4 418 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 HBS1LQ9Y450 684 aaKnown RBP11.93□□□□□ -0.5
FIRRE-201ENST00000427391 CDY2AQ9Y6F7 541 aa11.93□□□□□ -0.5
FIRRE-201ENST00000427391 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.93□□□□□ -0.5
FIRRE-201ENST00000427391 IQCA1LA6NCM1 817 aa11.92□□□□□ -0.5
FIRRE-201ENST00000427391 GABRDO14764 452 aa11.92□□□□□ -0.5
FIRRE-201ENST00000427391 OPHN1O60890 802 aa11.92□□□□□ -0.5
FIRRE-201ENST00000427391 PRKCGP05129 697 aa11.92□□□□□ -0.5
FIRRE-201ENST00000427391 ITGA2BP08514 1039 aa11.92□□□□□ -0.5
FIRRE-201ENST00000427391 RASSF2P50749 326 aa11.92□□□□□ -0.5
FIRRE-201ENST00000427391 CLNS1AP54105 237 aaKnown RBP11.92□□□□□ -0.5
FIRRE-201ENST00000427391 TPI1P60174 286 aa11.92□□□□□ -0.5
FIRRE-201ENST00000427391 SARNPP82979 210 aaKnown RBP11.92□□□□□ -0.5
FIRRE-201ENST00000427391 CDC42EP1Q00587 391 aa11.92□□□□□ -0.5
FIRRE-201ENST00000427391 PDK1Q15118 436 aa11.92□□□□□ -0.5
FIRRE-201ENST00000427391 C4orf50Q6ZRC1 276 aa11.92□□□□□ -0.5
FIRRE-201ENST00000427391 BNIPLQ7Z465 357 aa11.92□□□□□ -0.5
FIRRE-201ENST00000427391 TNS4Q8IZW8 715 aa11.92□□□□□ -0.5
FIRRE-201ENST00000427391 ZNF669Q96BR6 464 aaPredicted RBP11.92□□□□□ -0.5
FIRRE-201ENST00000427391 MFSD3Q96ES6 412 aa11.92□□□□□ -0.5
FIRRE-201ENST00000427391 RILPQ96NA2 401 aa11.92□□□□□ -0.5
FIRRE-201ENST00000427391 SLC2A13Q96QE2 648 aa11.92□□□□□ -0.5
FIRRE-201ENST00000427391 FAM167BQ9BTA0 163 aa11.92□□□□□ -0.5
FIRRE-201ENST00000427391 AP5M1Q9H0R1 490 aa11.92□□□□□ -0.5
FIRRE-201ENST00000427391 STAP1Q9ULZ2 295 aa11.92□□□□□ -0.5
FIRRE-201ENST00000427391 HACD1B0YJ81 288 aa11.92□□□□□ -0.5
FIRRE-201ENST00000427391 KLF11O14901 512 aa11.92□□□□□ -0.5
FIRRE-201ENST00000427391 PGK1P00558 417 aa11.92□□□□□ -0.5
FIRRE-201ENST00000427391 CD68P34810 354 aaPredicted RBP11.92□□□□□ -0.5
FIRRE-201ENST00000427391 BRCC3P46736 316 aa11.92□□□□□ -0.5
FIRRE-201ENST00000427391 PURAQ00577 322 aaKnown RBP11.92□□□□□ -0.5
FIRRE-201ENST00000427391 SATB1Q01826 763 aa11.92□□□□□ -0.5
FIRRE-201ENST00000427391 CBLBQ13191 982 aa11.92□□□□□ -0.5
FIRRE-201ENST00000427391 STX3Q13277 289 aa11.92□□□□□ -0.5
FIRRE-201ENST00000427391 PLD6Q8N2A8 252 aaKnown RBP11.92□□□□□ -0.5
FIRRE-201ENST00000427391 DTX3LQ8TDB6 740 aa11.92□□□□□ -0.5
FIRRE-201ENST00000427391 TMEM209Q96SK2 561 aa11.92□□□□□ -0.5
FIRRE-201ENST00000427391 OXCT2Q9BYC2 517 aaPredicted RBP11.92□□□□□ -0.5
FIRRE-201ENST00000427391 SHCBP1LQ9BZQ2 653 aa11.92□□□□□ -0.5
FIRRE-201ENST00000427391 TMEM216Q9P0N5 145 aa11.92□□□□□ -0.5
FIRRE-201ENST00000427391 ZFATQ9P243 1243 aa11.92□□□□□ -0.5
FIRRE-201ENST00000427391 DNAJC16Q9Y2G8 782 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms