RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 THAP2Q9H0W7 228 aa7.7□□□□□ -1.18
LINC01049-201ENST00000426840 EBF3Q9H4W6 596 aa7.7□□□□□ -1.18
LINC01049-201ENST00000426840 ECT2Q9H8V3 914 aa7.7□□□□□ -1.18
LINC01049-201ENST00000426840 HEBP1Q9NRV9 189 aa7.7□□□□□ -1.18
LINC01049-201ENST00000426840 SPTLC3Q9NUV7 552 aa7.7□□□□□ -1.18
LINC01049-201ENST00000426840 PARVAQ9NVD7 372 aa7.7□□□□□ -1.18
LINC01049-201ENST00000426840 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.7□□□□□ -1.18
LINC01049-201ENST00000426840 DDIT4Q9NX09 232 aa7.7□□□□□ -1.18
LINC01049-201ENST00000426840 CNOT8Q9UFF9 292 aaKnown RBP7.7□□□□□ -1.18
LINC01049-201ENST00000426840 ZNF510Q9Y2H8 683 aa7.7□□□□□ -1.18
LINC01049-201ENST00000426840 HCN4Q9Y3Q4 1203 aa7.7□□□□□ -1.18
LINC01049-201ENST00000426840 UNC80Q8N2C7 3258 aa7.7□□□□□ -1.18
LINC01049-201ENST00000426840 GOLGA6L7A0A1B0GV03 622 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 I6L893 689 aaPredicted RBP7.69□□□□□ -1.18
LINC01049-201ENST00000426840 AKR1B10O60218 316 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 ACSL4O60488 711 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 LATS1O95835 1130 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 CYP17A1P05093 508 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 H2AFZP0C0S5 128 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 MYBL1P10243 752 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 GLULP15104 373 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 ABCB4P21439 1286 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 GPD1P21695 349 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 GBP1P32455 592 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 GJA4P35212 333 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 PTPN9P43378 593 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 SOX9P48436 509 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 HARS2P49590 506 aaKnown RBP7.69□□□□□ -1.18
LINC01049-201ENST00000426840 SULT1E1P49888 294 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 ZNF143P52747 638 aaPredicted RBP7.69□□□□□ -1.18
LINC01049-201ENST00000426840 ATXN1P54253 815 aaKnown RBP7.69□□□□□ -1.18
LINC01049-201ENST00000426840 STARD6P59095 220 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 DEUP1Q05D60 604 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 NME3Q13232 169 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 PPP2R5DQ14738 602 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 C15orf59Q2T9L4 293 aaPredicted RBP7.69□□□□□ -1.18
LINC01049-201ENST00000426840 LY6G5CQ5SRR4 150 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 ARTNQ5T4W7 220 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 NUGGCQ68CJ6 796 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 NADSYN1Q6IA69 706 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 DNAJC24Q6P3W2 148 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 RAD9BQ6WBX8 426 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 H2AFVQ71UI9 128 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 TMTC1Q8IUR5 882 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 UNC45BQ8IWX7 931 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 CCDC170Q8IYT3 715 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 CPXM2Q8N436 756 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 C1orf216Q8TAB5 229 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 CSGALNACT1Q8TDX6 532 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 ATP2A3Q93084 1043 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 ZNF653Q96CK0 615 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 TRIM11Q96F44 468 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 PACSIN1Q9BY11 444 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 DEF6Q9H4E7 631 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 C8orf33Q9H7E9 229 aaPredicted RBP7.69□□□□□ -1.18
LINC01049-201ENST00000426840 FBRSL1Q9HCM7 1045 aaKnown RBP7.69□□□□□ -1.18
LINC01049-201ENST00000426840 ANLNQ9NQW6 1124 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 SPHK2Q9NRA0 654 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 PIGVQ9NUD9 493 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 ARHGEF38Q9NXL2 777 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 MYO1AQ9UBC5 1043 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 XPO7Q9UIA9 1087 aaKnown RBP7.69□□□□□ -1.18
LINC01049-201ENST00000426840 LSM7Q9UK45 103 aaKnown RBP7.69□□□□□ -1.18
LINC01049-201ENST00000426840 CA14Q9ULX7 337 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 STAP1Q9ULZ2 295 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 NOVA2Q9UNW9 492 aaKnown RBP7.69□□□□□ -1.18
LINC01049-201ENST00000426840 EPN1Q9Y6I3 576 aaPredicted RBP7.69□□□□□ -1.18
LINC01049-201ENST00000426840 COL4A2P08572 1712 aa7.69□□□□□ -1.18
LINC01049-201ENST00000426840 TICRRQ7Z2Z1 1910 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 SYNJ2BP-COX16A0A087WUM0 186 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 DCDC2BA2VCK2 349 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 SOWAHDA6NJG2 315 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 EIF3CLB5ME19 914 aaKnown RBP7.68□□□□□ -1.18
LINC01049-201ENST00000426840 SPECC1L-ADORA2AF8WAN1 911 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 TRDMT1O14717 391 aaKnown RBP7.68□□□□□ -1.18
LINC01049-201ENST00000426840 HOXC11O43248 304 aaPredicted RBP7.68□□□□□ -1.18
LINC01049-201ENST00000426840 CCP110O43303 1012 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 NFATC1O95644 943 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 TMEM253P0C7T8 217 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 MX2P20592 715 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 CD72P21854 359 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 SDC4P31431 198 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 SLC6A4P31645 630 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 CCR1P32246 355 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 CHKAP35790 457 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 OPRD1P41143 372 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 MAGEA1P43355 309 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 SLC6A11P48066 632 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 SLC11A2P49281 568 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 GALK1P51570 392 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 HDAC4P56524 1084 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 PSMA6P60900 246 aaKnown RBP7.68□□□□□ -1.18
LINC01049-201ENST00000426840 ATP11AP98196 1134 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 PRKCQQ04759 706 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 ZNF252P-AS1Q0IIN9 211 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 FZD5Q13467 585 aa7.68□□□□□ -1.18
LINC01049-201ENST00000426840 UBAP2LQ14157 1087 aaKnown RBP7.68□□□□□ -1.18
LINC01049-201ENST00000426840 MLF2Q15773 248 aaPredicted RBP7.68□□□□□ -1.18
LINC01049-201ENST00000426840 FAM133BQ5BKY9 247 aaKnown RBP7.68□□□□□ -1.18
LINC01049-201ENST00000426840 BRMS1LQ5PSV4 323 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms