RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 SFTPA1Q8IWL2 248 aa25.27■■□□□ 1.64
VEGFA-209ENST00000425836 PYROXD2Q8N2H3 581 aa25.27■■□□□ 1.64
VEGFA-209ENST00000425836 WFDC5Q8TCV5 224 aa25.27■■□□□ 1.64
VEGFA-209ENST00000425836 LACRTQ9GZZ8 138 aa25.27■■□□□ 1.64
VEGFA-209ENST00000425836 RBM12Q9NTZ6 932 aaKnown RBP25.27■■□□□ 1.64
VEGFA-209ENST00000425836 SLC27A6Q9Y2P4 619 aa25.27■■□□□ 1.64
VEGFA-209ENST00000425836 F5P12259 2224 aa25.26■■□□□ 1.63
VEGFA-209ENST00000425836 IGLV3-10A0A075B6K4 115 aa25.26■■□□□ 1.63
VEGFA-209ENST00000425836 A0A0A6YYK5 440 aaPredicted RBP25.26■■□□□ 1.63
VEGFA-209ENST00000425836 PRR33A8MZF0 331 aa25.26■■□□□ 1.63
VEGFA-209ENST00000425836 DCNP07585 359 aaKnown RBP25.26■■□□□ 1.63
VEGFA-209ENST00000425836 IL1R2P27930 398 aa25.26■■□□□ 1.63
VEGFA-209ENST00000425836 ARHGAP25P42331 645 aa25.26■■□□□ 1.63
VEGFA-209ENST00000425836 MESDQ14696 234 aa25.26■■□□□ 1.63
VEGFA-209ENST00000425836 PREPLQ4J6C6 727 aaPredicted RBP25.26■■□□□ 1.63
VEGFA-209ENST00000425836 ERMARDQ5T6L9 678 aa25.26■■□□□ 1.63
VEGFA-209ENST00000425836 MANEALQ5VSG8 457 aa25.26■■□□□ 1.63
VEGFA-209ENST00000425836 CARNMT1Q8N4J0 409 aa25.26■■□□□ 1.63
VEGFA-209ENST00000425836 TERB1Q8NA31 727 aa25.26■■□□□ 1.63
VEGFA-209ENST00000425836 CLDN23Q96B33 292 aa25.26■■□□□ 1.63
VEGFA-209ENST00000425836 GPATCH2LQ9NWQ4 482 aa25.26■■□□□ 1.63
VEGFA-209ENST00000425836 TMEM110-MUSTN1A8MSY1 372 aa25.25■■□□□ 1.63
VEGFA-209ENST00000425836 K7EQS6 105 aa25.25■■□□□ 1.63
VEGFA-209ENST00000425836 NCAM2O15394 837 aa25.25■■□□□ 1.63
VEGFA-209ENST00000425836 CNTN5O94779 1100 aa25.25■■□□□ 1.63
VEGFA-209ENST00000425836 LUC7L3O95232 432 aaKnown RBP25.25■■□□□ 1.63
VEGFA-209ENST00000425836 NOP2P46087 812 aaKnown RBP25.25■■□□□ 1.63
VEGFA-209ENST00000425836 HADHBP55084 474 aaKnown RBP25.25■■□□□ 1.63
VEGFA-209ENST00000425836 DGKKQ5KSL6 1271 aa25.25■■□□□ 1.63
VEGFA-209ENST00000425836 KIAA1328Q86T90 577 aa25.25■■□□□ 1.63
VEGFA-209ENST00000425836 MFN1Q8IWA4 741 aa25.25■■□□□ 1.63
VEGFA-209ENST00000425836 CCAR2Q8N163 923 aaKnown RBP25.25■■□□□ 1.63
VEGFA-209ENST00000425836 FIBINQ8TAL6 211 aa25.25■■□□□ 1.63
VEGFA-209ENST00000425836 SNRNP25Q9BV90 132 aaKnown RBP25.25■■□□□ 1.63
VEGFA-209ENST00000425836 SALL4Q9UJQ4 1053 aa25.25■■□□□ 1.63
VEGFA-209ENST00000425836 AP4E1Q9UPM8 1137 aa25.25■■□□□ 1.63
VEGFA-209ENST00000425836 DUSP10Q9Y6W6 482 aa25.25■■□□□ 1.63
VEGFA-209ENST00000425836 A0A1B0GVM2 712 aa25.24■■□□□ 1.63
VEGFA-209ENST00000425836 TBC1D3BA6NDS4 549 aa25.24■■□□□ 1.63
VEGFA-209ENST00000425836 TCAF2A6NFQ2 919 aa25.24■■□□□ 1.63
VEGFA-209ENST00000425836 PJA2O43164 708 aa25.24■■□□□ 1.63
VEGFA-209ENST00000425836 HLA-FP30511 346 aa25.24■■□□□ 1.63
VEGFA-209ENST00000425836 L1CAMP32004 1257 aa25.24■■□□□ 1.63
VEGFA-209ENST00000425836 MAN1A1P33908 653 aa25.24■■□□□ 1.63
VEGFA-209ENST00000425836 LRRC32Q14392 662 aa25.24■■□□□ 1.63
VEGFA-209ENST00000425836 CA9Q16790 459 aa25.24■■□□□ 1.63
VEGFA-209ENST00000425836 ALFQ53S48 1182 aa25.24■■□□□ 1.63
VEGFA-209ENST00000425836 LMLNQ96KR4 655 aa25.24■■□□□ 1.63
VEGFA-209ENST00000425836 MPP6Q9NZW5 540 aa25.24■■□□□ 1.63
VEGFA-209ENST00000425836 DLGAP2Q9P1A6 1054 aa25.24■■□□□ 1.63
VEGFA-209ENST00000425836 PPARGC1AQ9UBK2 798 aaKnown RBP25.24■■□□□ 1.63
VEGFA-209ENST00000425836 ADGRG1Q9Y653 693 aa25.24■■□□□ 1.63
VEGFA-209ENST00000425836 MYOFQ9NZM1 2061 aa25.23■■□□□ 1.63
VEGFA-209ENST00000425836 H0Y626 953 aa25.23■■□□□ 1.63
VEGFA-209ENST00000425836 LRIG2O94898 1065 aa25.23■■□□□ 1.63
VEGFA-209ENST00000425836 CDH4P55283 916 aa25.23■■□□□ 1.63
VEGFA-209ENST00000425836 SLC25A11Q02978 314 aaKnown RBP25.23■■□□□ 1.63
VEGFA-209ENST00000425836 BOLA3Q53S33 107 aa25.23■■□□□ 1.63
VEGFA-209ENST00000425836 FSCBQ5H9T9 825 aa25.23■■□□□ 1.63
VEGFA-209ENST00000425836 TXNRD3NBQ6F5E7 133 aa25.23■■□□□ 1.63
VEGFA-209ENST00000425836 CHST9Q7L1S5 443 aa25.23■■□□□ 1.63
VEGFA-209ENST00000425836 PSTKQ8IV42 348 aaKnown RBP25.23■■□□□ 1.63
VEGFA-209ENST00000425836 TMEM105Q8N8V8 129 aa25.23■■□□□ 1.63
VEGFA-209ENST00000425836 ZWILCHQ9H900 591 aa25.23■■□□□ 1.63
VEGFA-209ENST00000425836 A0A0U1RQJ8 604 aa25.22■■□□□ 1.63
VEGFA-209ENST00000425836 ANTXRLA6NF34 631 aa25.22■■□□□ 1.63
VEGFA-209ENST00000425836 BTNL10A8MVZ5 291 aa25.22■■□□□ 1.63
VEGFA-209ENST00000425836 PRRT4C9JH25 899 aa25.22■■□□□ 1.63
VEGFA-209ENST00000425836 CLDN11O75508 207 aa25.22■■□□□ 1.63
VEGFA-209ENST00000425836 TNFRSF4P43489 277 aa25.22■■□□□ 1.63
VEGFA-209ENST00000425836 SEMA3BQ13214 749 aa25.22■■□□□ 1.63
VEGFA-209ENST00000425836 CDH18Q13634 790 aa25.22■■□□□ 1.63
VEGFA-209ENST00000425836 GEN1Q17RS7 908 aa25.22■■□□□ 1.63
VEGFA-209ENST00000425836 FBXO43Q4G163 708 aa25.22■■□□□ 1.63
VEGFA-209ENST00000425836 KCNT1Q5JUK3 1230 aa25.22■■□□□ 1.63
VEGFA-209ENST00000425836 CCDC117Q8IWD4 279 aaPredicted RBP25.22■■□□□ 1.63
VEGFA-209ENST00000425836 SYNPOQ8N3V7 929 aa25.22■■□□□ 1.63
VEGFA-209ENST00000425836 DDX51Q8N8A6 666 aaKnown RBP eCLIP25.22■■□□□ 1.637e-8■■□□□ 11.5
VEGFA-209ENST00000425836 ZNF557Q8N988 423 aaPredicted RBP25.22■■□□□ 1.63
VEGFA-209ENST00000425836 ATRIPQ8WXE1 791 aa25.22■■□□□ 1.63
VEGFA-209ENST00000425836 ZYG11BQ9C0D3 744 aa25.22■■□□□ 1.63
VEGFA-209ENST00000425836 DHX35Q9H5Z1 703 aaKnown RBP25.22■■□□□ 1.63
VEGFA-209ENST00000425836 ABCB8Q9NUT2 735 aa25.22■■□□□ 1.63
VEGFA-209ENST00000425836 NEU3Q9UQ49 428 aa25.22■■□□□ 1.63
VEGFA-209ENST00000425836 NRDCO43847 1150 aa25.22■■□□□ 1.63
VEGFA-209ENST00000425836 CD70P32970 193 aa25.22■■□□□ 1.63
VEGFA-209ENST00000425836 SSR1P43307 286 aaKnown RBP25.22■■□□□ 1.63
VEGFA-209ENST00000425836 RPS9P46781 194 aaKnown RBP25.22■■□□□ 1.63
VEGFA-209ENST00000425836 HADHQ16836 314 aaKnown RBP25.22■■□□□ 1.63
VEGFA-209ENST00000425836 SMTNL2Q2TAL5 461 aa25.22■■□□□ 1.63
VEGFA-209ENST00000425836 NUDT18Q6ZVK8 323 aa25.22■■□□□ 1.63
VEGFA-209ENST00000425836 KIAA0907Q7Z7F0 614 aaPredicted RBP25.22■■□□□ 1.63
VEGFA-209ENST00000425836 GGA2Q9UJY4 613 aa25.22■■□□□ 1.63
VEGFA-209ENST00000425836 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP25.21■■□□□ 1.63
VEGFA-209ENST00000425836 BUB1BO60566 1050 aaPredicted RBP25.21■■□□□ 1.63
VEGFA-209ENST00000425836 RARAP10276 462 aa25.21■■□□□ 1.63
VEGFA-209ENST00000425836 AVPR2P30518 371 aa25.21■■□□□ 1.63
VEGFA-209ENST00000425836 TAS2R40P59535 323 aa25.21■■□□□ 1.63
VEGFA-209ENST00000425836 LMAN2Q12907 356 aa25.21■■□□□ 1.63
VEGFA-209ENST00000425836 ZNF177Q13360 481 aaPredicted RBP25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms