RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 COX16Q9P0S2 106 aa16.15■□□□□ 0.18
SHOX2-202ENST00000425436 WHRNQ9P202 907 aa16.15■□□□□ 0.18
SHOX2-202ENST00000425436 FAM153AQ9UHL3 310 aa16.15■□□□□ 0.18
SHOX2-202ENST00000425436 MUTYHQ9UIF7 546 aa16.15■□□□□ 0.18
SHOX2-202ENST00000425436 DRG1Q9Y295 367 aaKnown RBP16.15■□□□□ 0.18
SHOX2-202ENST00000425436 MUC3AQ02505 3323 aa16.15■□□□□ 0.18
SHOX2-202ENST00000425436 H3BQF6 201 aa16.14■□□□□ 0.18
SHOX2-202ENST00000425436 POLR3GO15318 223 aaPredicted RBP16.14■□□□□ 0.18
SHOX2-202ENST00000425436 DAB1O75553 588 aa16.14■□□□□ 0.18
SHOX2-202ENST00000425436 SYF2O95926 243 aaKnown RBP16.14■□□□□ 0.18
SHOX2-202ENST00000425436 TFE3P19532 575 aaPredicted RBP16.14■□□□□ 0.18
SHOX2-202ENST00000425436 GDI1P31150 447 aa16.14■□□□□ 0.18
SHOX2-202ENST00000425436 MATKP42679 507 aa16.14■□□□□ 0.18
SHOX2-202ENST00000425436 TRADDQ15628 312 aa16.14■□□□□ 0.18
SHOX2-202ENST00000425436 TRIM68Q6AZZ1 485 aa16.14■□□□□ 0.18
SHOX2-202ENST00000425436 MSANTD2Q6P1R3 559 aa16.14■□□□□ 0.18
SHOX2-202ENST00000425436 SPOCD1Q6ZMY3 1216 aa16.14■□□□□ 0.18
SHOX2-202ENST00000425436 CEP128Q6ZU80 1094 aa16.14■□□□□ 0.18
SHOX2-202ENST00000425436 BEND5Q7L4P6 421 aa16.14■□□□□ 0.18
SHOX2-202ENST00000425436 TAC4Q86UU9 113 aa16.14■□□□□ 0.18
SHOX2-202ENST00000425436 DDX42Q86XP3 938 aaKnown RBP eCLIP16.14■□□□□ 0.18
SHOX2-202ENST00000425436 CCDC89Q8N998 374 aa16.14■□□□□ 0.18
SHOX2-202ENST00000425436 RNF25Q96BH1 459 aaPredicted RBP16.14■□□□□ 0.18
SHOX2-202ENST00000425436 SH3GL2Q99962 352 aa16.14■□□□□ 0.18
SHOX2-202ENST00000425436 TRIM62Q9BVG3 475 aa16.14■□□□□ 0.18
SHOX2-202ENST00000425436 TRMT61BQ9BVS5 477 aaKnown RBP16.14■□□□□ 0.18
SHOX2-202ENST00000425436 LINC00597Q9H2U6 94 aa16.14■□□□□ 0.18
SHOX2-202ENST00000425436 KIF9Q9HAQ2 790 aa16.14■□□□□ 0.18
SHOX2-202ENST00000425436 OBP2AQ9NY56 170 aa16.14■□□□□ 0.18
SHOX2-202ENST00000425436 SH3BP1Q9Y3L3 701 aa16.14■□□□□ 0.18
SHOX2-202ENST00000425436 C2CD4BA6NLJ0 364 aa16.14■□□□□ 0.17
SHOX2-202ENST00000425436 AGPSO00116 658 aa16.14■□□□□ 0.17
SHOX2-202ENST00000425436 LRCH4O75427 683 aa16.14■□□□□ 0.17
SHOX2-202ENST00000425436 STC2O76061 302 aa16.14■□□□□ 0.17
SHOX2-202ENST00000425436 TRUB2O95900 331 aaKnown RBP16.14■□□□□ 0.17
SHOX2-202ENST00000425436 PDGFRAP16234 1089 aa16.14■□□□□ 0.17
SHOX2-202ENST00000425436 NOS2P35228 1153 aa16.14■□□□□ 0.17
SHOX2-202ENST00000425436 COG7P83436 770 aa16.14■□□□□ 0.17
SHOX2-202ENST00000425436 SLC25A11Q02978 314 aaKnown RBP16.14■□□□□ 0.17
SHOX2-202ENST00000425436 PTK6Q13882 451 aa16.14■□□□□ 0.17
SHOX2-202ENST00000425436 SLMAPQ14BN4 828 aa16.14■□□□□ 0.17
SHOX2-202ENST00000425436 BOLA3Q53S33 107 aa16.14■□□□□ 0.17
SHOX2-202ENST00000425436 TSEN2Q8NCE0 465 aaKnown RBP16.14■□□□□ 0.17
SHOX2-202ENST00000425436 C1orf54Q8WWF1 131 aa16.14■□□□□ 0.17
SHOX2-202ENST00000425436 RXFP2Q8WXD0 754 aa16.14■□□□□ 0.17
SHOX2-202ENST00000425436 ASIC4Q96FT7 647 aa16.14■□□□□ 0.17
SHOX2-202ENST00000425436 CFAP57Q96MR6 1250 aa16.14■□□□□ 0.17
SHOX2-202ENST00000425436 HEMGNQ9BXL5 484 aa16.14■□□□□ 0.17
SHOX2-202ENST00000425436 ADAM33Q9BZ11 813 aa16.14■□□□□ 0.17
SHOX2-202ENST00000425436 ZDHHC18Q9NUE0 388 aa16.14■□□□□ 0.17
SHOX2-202ENST00000425436 CALCOCO1Q9P1Z2 691 aa16.14■□□□□ 0.17
SHOX2-202ENST00000425436 SNX24Q9Y343 169 aa16.14■□□□□ 0.17
SHOX2-202ENST00000425436 WNT6Q9Y6F9 365 aa16.14■□□□□ 0.17
SHOX2-202ENST00000425436 BDP1A6H8Y1 2624 aa16.13■□□□□ 0.17
SHOX2-202ENST00000425436 LRRD1A4D1F6 860 aa16.13■□□□□ 0.17
SHOX2-202ENST00000425436 GOLGA6L10A6NI86 522 aa16.13■□□□□ 0.17
SHOX2-202ENST00000425436 M0QYT0 321 aa16.13■□□□□ 0.17
SHOX2-202ENST00000425436 PPFIA2O75334 1257 aa16.13■□□□□ 0.17
SHOX2-202ENST00000425436 KLKB1P03952 638 aa16.13■□□□□ 0.17
SHOX2-202ENST00000425436 GJC1P36383 396 aa16.13■□□□□ 0.17
SHOX2-202ENST00000425436 CDKN2BP42772 138 aa16.13■□□□□ 0.17
SHOX2-202ENST00000425436 EIF3BP55884 814 aaKnown RBP16.13■□□□□ 0.17
SHOX2-202ENST00000425436 TBX4P57082 545 aa16.13■□□□□ 0.17
SHOX2-202ENST00000425436 FCHO2Q0JRZ9 810 aa16.13■□□□□ 0.17
SHOX2-202ENST00000425436 USP4Q13107 963 aa16.13■□□□□ 0.17
SHOX2-202ENST00000425436 NME3Q13232 169 aa16.13■□□□□ 0.17
SHOX2-202ENST00000425436 TERF2Q15554 542 aa16.13■□□□□ 0.17
SHOX2-202ENST00000425436 TAZQ16635 292 aa16.13■□□□□ 0.17
SHOX2-202ENST00000425436 MFSD7Q6UXD7 560 aa16.13■□□□□ 0.17
SHOX2-202ENST00000425436 CROCCP2Q86T23 111 aa16.13■□□□□ 0.17
SHOX2-202ENST00000425436 VSIG1Q86XK7 387 aa16.13■□□□□ 0.17
SHOX2-202ENST00000425436 MAP7D3Q8IWC1 876 aa16.13■□□□□ 0.17
SHOX2-202ENST00000425436 TTC8Q8TAM2 541 aa16.13■□□□□ 0.17
SHOX2-202ENST00000425436 DEPDC1BQ8WUY9 529 aa16.13■□□□□ 0.17
SHOX2-202ENST00000425436 ART4Q93070 314 aa16.13■□□□□ 0.17
SHOX2-202ENST00000425436 EXOC4Q96A65 974 aa16.13■□□□□ 0.17
SHOX2-202ENST00000425436 DDX23Q9BUQ8 820 aaKnown RBP16.13■□□□□ 0.17
SHOX2-202ENST00000425436 TRIM31Q9BZY9 425 aa16.13■□□□□ 0.17
SHOX2-202ENST00000425436 BRD9Q9H8M2 597 aa16.13■□□□□ 0.17
SHOX2-202ENST00000425436 FAM204AQ9H8W3 233 aa16.13■□□□□ 0.17
SHOX2-202ENST00000425436 THG1LQ9NWX6 298 aaKnown RBP16.13■□□□□ 0.17
SHOX2-202ENST00000425436 DUS2Q9NX74 493 aaKnown RBP16.13■□□□□ 0.17
SHOX2-202ENST00000425436 USP18Q9UMW8 372 aa16.13■□□□□ 0.17
SHOX2-202ENST00000425436 SORCS3Q9UPU3 1222 aa16.13■□□□□ 0.17
SHOX2-202ENST00000425436 hCG_1818297A0A087WSY0 165 aa16.12■□□□□ 0.17
SHOX2-202ENST00000425436 A6NNZ2 444 aa16.12■□□□□ 0.17
SHOX2-202ENST00000425436 GREM1O60565 184 aa16.12■□□□□ 0.17
SHOX2-202ENST00000425436 RNF40O75150 1001 aa16.12■□□□□ 0.17
SHOX2-202ENST00000425436 TCF3P15923 654 aa16.12■□□□□ 0.17
SHOX2-202ENST00000425436 CORO1AP31146 461 aaKnown RBP16.12■□□□□ 0.17
SHOX2-202ENST00000425436 SDC4P31431 198 aa16.12■□□□□ 0.17
SHOX2-202ENST00000425436 SULT1E1P49888 294 aa16.12■□□□□ 0.17
SHOX2-202ENST00000425436 PLTPP55058 493 aa16.12■□□□□ 0.17
SHOX2-202ENST00000425436 ATP11AP98196 1134 aa16.12■□□□□ 0.17
SHOX2-202ENST00000425436 TNK2Q07912 1038 aa16.12■□□□□ 0.17
SHOX2-202ENST00000425436 DHX9Q08211 1270 aaKnown RBP16.12■□□□□ 0.17
SHOX2-202ENST00000425436 TRIP4Q15650 581 aaPredicted RBP16.12■□□□□ 0.17
SHOX2-202ENST00000425436 C15orf59Q2T9L4 293 aaPredicted RBP16.12■□□□□ 0.17
SHOX2-202ENST00000425436 TUBB8Q3ZCM7 444 aa16.12■□□□□ 0.17
SHOX2-202ENST00000425436 CCDC14Q49A88 953 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms