RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 PTPN3P26045 913 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 CCND3P30281 292 aaPredicted RBP11.88□□□□□ -0.51
UBR4-207ENST00000425413 HOXC8P31273 242 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 FDFT1P37268 417 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 KCNA10Q16322 511 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 UPP1Q16831 310 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 PREPLQ4J6C6 727 aaPredicted RBP11.88□□□□□ -0.51
UBR4-207ENST00000425413 TAC4Q86UU9 113 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 RASSF3Q86WH2 238 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 ARID3BQ8IVW6 561 aaPredicted RBP11.88□□□□□ -0.51
UBR4-207ENST00000425413 OR10T2Q8NGX3 314 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 AGAP11Q8TF27 550 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 ARNTL2Q8WYA1 636 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 UTP4Q969X6 686 aaKnown RBP11.88□□□□□ -0.51
UBR4-207ENST00000425413 LRRC39Q96DD0 335 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 FERMT1Q9BQL6 677 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 TACO1Q9BSH4 297 aaKnown RBP11.88□□□□□ -0.51
UBR4-207ENST00000425413 XPNPEP3Q9NQH7 507 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 ARHGEF3Q9NR81 526 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 FBXW11Q9UKB1 542 aa11.88□□□□□ -0.51
UBR4-207ENST00000425413 ZNF638Q14966 1978 aaKnown RBP11.87□□□□□ -0.51
UBR4-207ENST00000425413 HACD1B0YJ81 288 aa11.87□□□□□ -0.51
UBR4-207ENST00000425413 ZNF487B1APH4 448 aa11.87□□□□□ -0.51
UBR4-207ENST00000425413 DFFAO00273 331 aa11.87□□□□□ -0.51
UBR4-207ENST00000425413 TPP1O14773 563 aa11.87□□□□□ -0.51
UBR4-207ENST00000425413 LRIG2O94898 1065 aa11.87□□□□□ -0.51
UBR4-207ENST00000425413 JCHAINP01591 159 aa11.87□□□□□ -0.51
UBR4-207ENST00000425413 DHRS4L1P0CG22 281 aa11.87□□□□□ -0.51
UBR4-207ENST00000425413 RPL10AP62906 217 aaKnown RBP11.87□□□□□ -0.51
UBR4-207ENST00000425413 PRKCZQ05513 592 aa11.87□□□□□ -0.51
UBR4-207ENST00000425413 ZBTB17Q13105 803 aa11.87□□□□□ -0.51
UBR4-207ENST00000425413 ACCSLQ4AC99 568 aa11.87□□□□□ -0.51
UBR4-207ENST00000425413 CERCAMQ5T4B2 595 aa11.87□□□□□ -0.51
UBR4-207ENST00000425413 MFSD14CQ5VZR4 134 aa11.87□□□□□ -0.51
UBR4-207ENST00000425413 ASRGL1Q7L266 308 aa11.87□□□□□ -0.51
UBR4-207ENST00000425413 CLNKQ7Z7G1 428 aa11.87□□□□□ -0.51
UBR4-207ENST00000425413 ALYREFQ86V81 257 aaKnown RBP11.87□□□□□ -0.51
UBR4-207ENST00000425413 SERINC5Q86VE9 423 aa11.87□□□□□ -0.51
UBR4-207ENST00000425413 PPP1R14CQ8TAE6 165 aa11.87□□□□□ -0.51
UBR4-207ENST00000425413 ZNF669Q96BR6 464 aaPredicted RBP11.87□□□□□ -0.51
UBR4-207ENST00000425413 SMARCD1Q96GM5 515 aa11.87□□□□□ -0.51
UBR4-207ENST00000425413 ZNF358Q9NW07 568 aa11.87□□□□□ -0.51
UBR4-207ENST00000425413 ABT1Q9ULW3 272 aaKnown RBP11.87□□□□□ -0.51
UBR4-207ENST00000425413 CYBAP13498 195 aa11.87□□□□□ -0.51
UBR4-207ENST00000425413 SAT1P21673 171 aa11.87□□□□□ -0.51
UBR4-207ENST00000425413 KCNA4P22459 653 aa11.87□□□□□ -0.51
UBR4-207ENST00000425413 PCSK1P29120 753 aa11.87□□□□□ -0.51
UBR4-207ENST00000425413 SLC8A1P32418 973 aa11.87□□□□□ -0.51
UBR4-207ENST00000425413 CPA2P48052 419 aa11.87□□□□□ -0.51
UBR4-207ENST00000425413 CAP1Q01518 475 aa11.87□□□□□ -0.51
UBR4-207ENST00000425413 ARHGAP36Q6ZRI8 547 aa11.87□□□□□ -0.51
UBR4-207ENST00000425413 CMC1Q7Z7K0 106 aa11.87□□□□□ -0.51
UBR4-207ENST00000425413 SCN4BQ8IWT1 228 aa11.87□□□□□ -0.51
UBR4-207ENST00000425413 E2F7Q96AV8 911 aa11.87□□□□□ -0.51
UBR4-207ENST00000425413 FCRL3Q96P31 734 aaPredicted RBP11.87□□□□□ -0.51
UBR4-207ENST00000425413 C20orf27Q9GZN8 174 aa11.87□□□□□ -0.51
UBR4-207ENST00000425413 CNGB3Q9NQW8 809 aa11.87□□□□□ -0.51
UBR4-207ENST00000425413 ARL8BQ9NVJ2 186 aa11.87□□□□□ -0.51
UBR4-207ENST00000425413 ZFATQ9P243 1243 aa11.87□□□□□ -0.51
UBR4-207ENST00000425413 TXNDC16Q9P2K2 825 aa11.87□□□□□ -0.51
UBR4-207ENST00000425413 SFMBT1Q9UHJ3 866 aa11.87□□□□□ -0.51
UBR4-207ENST00000425413 CDH9Q9ULB4 789 aa11.87□□□□□ -0.51
UBR4-207ENST00000425413 Q9Y3F1 56 aa11.87□□□□□ -0.51
UBR4-207ENST00000425413 HHLA1C9JL84 531 aa11.86□□□□□ -0.51
UBR4-207ENST00000425413 C2CD2LO14523 706 aa11.86□□□□□ -0.51
UBR4-207ENST00000425413 GPR182O15218 404 aa11.86□□□□□ -0.51
UBR4-207ENST00000425413 LYPLA1O75608 230 aaPredicted RBP11.86□□□□□ -0.51
UBR4-207ENST00000425413 ODC1P11926 461 aa11.86□□□□□ -0.51
UBR4-207ENST00000425413 CCNB1P14635 433 aa11.86□□□□□ -0.51
UBR4-207ENST00000425413 NFKB1P19838 968 aa11.86□□□□□ -0.51
UBR4-207ENST00000425413 ERFP50548 548 aa11.86□□□□□ -0.51
UBR4-207ENST00000425413 GJA9P57773 515 aa11.86□□□□□ -0.51
UBR4-207ENST00000425413 PARP6Q2NL67 630 aa11.86□□□□□ -0.51
UBR4-207ENST00000425413 LRRC8BQ6P9F7 803 aa11.86□□□□□ -0.51
UBR4-207ENST00000425413 C4orf22Q6V702 233 aa11.86□□□□□ -0.51
UBR4-207ENST00000425413 PACS1Q6VY07 963 aa11.86□□□□□ -0.51
UBR4-207ENST00000425413 OTOP3Q7RTS5 596 aa11.86□□□□□ -0.51
UBR4-207ENST00000425413 LONP2Q86WA8 852 aa11.86□□□□□ -0.51
UBR4-207ENST00000425413 TMEM86AQ8N2M4 240 aa11.86□□□□□ -0.51
UBR4-207ENST00000425413 N4BP2L2Q92802 583 aaPredicted RBP11.86□□□□□ -0.51
UBR4-207ENST00000425413 MYCBPQ99417 103 aaPredicted RBP11.86□□□□□ -0.51
UBR4-207ENST00000425413 AGAP2Q99490 1192 aa11.86□□□□□ -0.51
UBR4-207ENST00000425413 KCNK13Q9HB14 408 aa11.86□□□□□ -0.51
UBR4-207ENST00000425413 ACSS2Q9NR19 701 aa11.86□□□□□ -0.51
UBR4-207ENST00000425413 MOCS1Q9NZB8 636 aa11.86□□□□□ -0.51
UBR4-207ENST00000425413 ZNF180Q9UJW8 692 aa11.86□□□□□ -0.51
UBR4-207ENST00000425413 LAMA2P24043 3122 aaKnown RBP11.86□□□□□ -0.51
UBR4-207ENST00000425413 TTC3P53804 2025 aa11.86□□□□□ -0.51
UBR4-207ENST00000425413 RALGAPA2Q2PPJ7 1873 aa11.86□□□□□ -0.51
UBR4-207ENST00000425413 FBXO21O94952 628 aa11.86□□□□□ -0.51
UBR4-207ENST00000425413 ALDOAP04075 364 aaKnown RBP11.86□□□□□ -0.51
UBR4-207ENST00000425413 PAFAH1B3Q15102 231 aaKnown RBP11.86□□□□□ -0.51
UBR4-207ENST00000425413 ARL13BQ3SXY8 428 aa11.86□□□□□ -0.51
UBR4-207ENST00000425413 METTL23Q86XA0 190 aa11.86□□□□□ -0.51
UBR4-207ENST00000425413 KIRREL3Q8IZU9 778 aa11.86□□□□□ -0.51
UBR4-207ENST00000425413 GPR152Q8TDT2 470 aa11.86□□□□□ -0.51
UBR4-207ENST00000425413 MFSD3Q96ES6 412 aa11.86□□□□□ -0.51
UBR4-207ENST00000425413 TBC1D10AQ9BXI6 508 aa11.86□□□□□ -0.51
UBR4-207ENST00000425413 RCOR3Q9P2K3 495 aaPredicted RBP11.86□□□□□ -0.51
UBR4-207ENST00000425413 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms