RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 DEPDC1BQ8WUY9 529 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 RPL10LQ96L21 214 aaKnown RBP11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 TMEM216Q9P0N5 145 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 PSAT1Q9Y617 370 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 E7ESA3 106 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 KCNN4O15554 427 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 HLA-DRAP01903 254 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 CCDC130P13994 396 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 S100A1P23297 94 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 GABRB3P28472 473 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 ECE1P42892 770 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 PTP4A2Q12974 167 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 SF3B4Q15427 424 aaKnown RBP eCLIP11.58□□□□□ -0.562e-9■■■■□ 21.6
SEC61A1-202ENST00000424880 SMUG1Q53HV7 270 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 WDR44Q5JSH3 913 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 DEPDC1Q5TB30 811 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 UNC5AQ6ZN44 842 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 ZNF606Q8WXB4 792 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 PDGFDQ9GZP0 370 aaPredicted RBP11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 MYRFQ9Y2G1 1151 aa11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 CTDP1Q9Y5B0 961 aaPredicted RBP11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 GPC6Q9Y625 555 aaPredicted RBP11.58□□□□□ -0.56
SEC61A1-202ENST00000424880 NFASCO94856 1347 aa11.57□□□□□ -0.56
SEC61A1-202ENST00000424880 SAC3D1A6NKF1 404 aa11.57□□□□□ -0.56
SEC61A1-202ENST00000424880 C1QAP02745 245 aa11.57□□□□□ -0.56
SEC61A1-202ENST00000424880 CHRNGP07510 517 aa11.57□□□□□ -0.56
SEC61A1-202ENST00000424880 L1CAMP32004 1257 aa11.57□□□□□ -0.56
SEC61A1-202ENST00000424880 RARRES1P49788 294 aa11.57□□□□□ -0.56
SEC61A1-202ENST00000424880 LIG4P49917 911 aa11.57□□□□□ -0.56
SEC61A1-202ENST00000424880 SPP2Q13103 211 aa11.57□□□□□ -0.56
SEC61A1-202ENST00000424880 PMS2P3Q13401 168 aa11.57□□□□□ -0.56
SEC61A1-202ENST00000424880 INAQ16352 499 aa11.57□□□□□ -0.56
SEC61A1-202ENST00000424880 ANGEL2Q5VTE6 544 aaKnown RBP11.57□□□□□ -0.56
SEC61A1-202ENST00000424880 NAPRTQ6XQN6 538 aa11.57□□□□□ -0.56
SEC61A1-202ENST00000424880 GPR180Q86V85 440 aa11.57□□□□□ -0.56
SEC61A1-202ENST00000424880 ZC3H7AQ8IWR0 971 aaKnown RBP11.57□□□□□ -0.56
SEC61A1-202ENST00000424880 PDCD6IPQ8WUM4 868 aaKnown RBP11.57□□□□□ -0.56
SEC61A1-202ENST00000424880 STK39Q9UEW8 545 aa11.57□□□□□ -0.56
SEC61A1-202ENST00000424880 GAKO14976 1311 aa11.57□□□□□ -0.56
SEC61A1-202ENST00000424880 CDK5RAP2Q96SN8 1893 aa11.57□□□□□ -0.56
SEC61A1-202ENST00000424880 SOBPA7XYQ1 873 aa11.57□□□□□ -0.56
SEC61A1-202ENST00000424880 GRAP2O75791 330 aa11.57□□□□□ -0.56
SEC61A1-202ENST00000424880 KRT38O76015 456 aa11.57□□□□□ -0.56
SEC61A1-202ENST00000424880 JUNP05412 331 aaKnown RBP11.57□□□□□ -0.56
SEC61A1-202ENST00000424880 SAT1P21673 171 aa11.57□□□□□ -0.56
SEC61A1-202ENST00000424880 KCNC4Q03721 635 aa11.57□□□□□ -0.56
SEC61A1-202ENST00000424880 PCLAFQ15004 111 aa11.57□□□□□ -0.56
SEC61A1-202ENST00000424880 TDRD10Q5VZ19 366 aaKnown RBP11.57□□□□□ -0.56
SEC61A1-202ENST00000424880 CHERPQ8IWX8 916 aaKnown RBP11.57□□□□□ -0.56
SEC61A1-202ENST00000424880 BSNDQ8WZ55 320 aa11.57□□□□□ -0.56
SEC61A1-202ENST00000424880 ACO2Q99798 780 aaKnown RBP11.57□□□□□ -0.56
SEC61A1-202ENST00000424880 HAUS8Q9BT25 410 aa11.57□□□□□ -0.56
SEC61A1-202ENST00000424880 NOX1Q9Y5S8 564 aa11.57□□□□□ -0.56
SEC61A1-202ENST00000424880 COL11A2P13942 1736 aaPredicted RBP11.57□□□□□ -0.56
SEC61A1-202ENST00000424880 ASTN2O75129 1339 aaPredicted RBP11.57□□□□□ -0.56
SEC61A1-202ENST00000424880 C3orf70A6NLC5 250 aaPredicted RBP11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 B4GAT1O43505 415 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 TIPRLO75663 272 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 ZNF12P17014 697 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 NUP107P57740 925 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 DNASE1L3Q13609 305 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 PGS1Q32NB8 556 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 GALNT18Q6P9A2 607 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 BNC2Q6ZN30 1099 aaPredicted RBP11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 SIAH1Q8IUQ4 282 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 FIBCD1Q8N539 461 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 SAMD3Q8N6K7 520 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 TBC1D15Q8TC07 691 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 TANKQ92844 425 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 ZBTB45Q96K62 511 aaPredicted RBP11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 ZC3H12CQ9C0D7 883 aaKnown RBP11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 DRC3Q9H069 523 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 CXorf21Q9HAI6 301 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 KMT5AQ9NQR1 393 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 GPATCH2LQ9NWQ4 482 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 GPRC5DQ9NZD1 345 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 TBX20Q9UMR3 447 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 DGKBQ9Y6T7 804 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 H3BMQ9 156 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 H3BNH8 94 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 NDUFB10O96000 172 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 ALDOAP04075 364 aaKnown RBP11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 JAG1P78504 1218 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 CYP24A1Q07973 514 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 XKR9Q5GH70 373 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 DRICH1Q6PGQ1 229 aaPredicted RBP11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 CAND1Q86VP6 1230 aaKnown RBP11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 TICAM1Q8IUC6 712 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 SDR16C5Q8N3Y7 309 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 WNK4Q96J92 1243 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 COG8Q96MW5 612 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 CEP41Q9BYV8 373 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 COA1Q9GZY4 146 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 TPK1Q9H3S4 243 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 POLE4Q9NR33 117 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 NAV1Q8NEY1 1877 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 ZNF195O14628 629 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 TOR1BO14657 336 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 MCF2LO15068 1137 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 KDM1AO60341 852 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms