RNA–Protein interactions for RNA: ENST00000423653.5

CCDC78-203, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC78, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-203ENST00000423653 MIR1-1HGQ9H1L0 117 aa17.38■□□□□ 0.37
CCDC78-203ENST00000423653 SYNCQ9H7C4 482 aa17.38■□□□□ 0.37
CCDC78-203ENST00000423653 PRSS16Q9NQE7 514 aa17.38■□□□□ 0.37
CCDC78-203ENST00000423653 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.38■□□□□ 0.37
CCDC78-203ENST00000423653 DDIT4Q9NX09 232 aa17.38■□□□□ 0.37
CCDC78-203ENST00000423653 METTL12A8MUP2 240 aa17.37■□□□□ 0.37
CCDC78-203ENST00000423653 BCAT2O15382 392 aaPredicted RBP17.37■□□□□ 0.37
CCDC78-203ENST00000423653 RNASEH1O60930 286 aaKnown RBP17.37■□□□□ 0.37
CCDC78-203ENST00000423653 TACR2P21452 398 aa17.37■□□□□ 0.37
CCDC78-203ENST00000423653 MAOBP27338 520 aa17.37■□□□□ 0.37
CCDC78-203ENST00000423653 CCR1P32246 355 aa17.37■□□□□ 0.37
CCDC78-203ENST00000423653 BPIFB4P59827 614 aa17.37■□□□□ 0.37
CCDC78-203ENST00000423653 SFSWAPQ12872 951 aaKnown RBP17.37■□□□□ 0.37
CCDC78-203ENST00000423653 FOXC1Q12948 553 aa17.37■□□□□ 0.37
CCDC78-203ENST00000423653 SLC14A1Q13336 389 aa17.37■□□□□ 0.37
CCDC78-203ENST00000423653 HNRNPDQ14103 355 aaKnown RBP17.37■□□□□ 0.37
CCDC78-203ENST00000423653 ST3GAL2Q16842 350 aa17.37■□□□□ 0.37
CCDC78-203ENST00000423653 PITRM1Q5JRX3 1037 aa17.37■□□□□ 0.37
CCDC78-203ENST00000423653 RABGAP1LQ5R372 815 aa17.37■□□□□ 0.37
CCDC78-203ENST00000423653 RNF219Q5W0B1 726 aaPredicted RBP17.37■□□□□ 0.37
CCDC78-203ENST00000423653 RAP1GAP2Q684P5 730 aa17.37■□□□□ 0.37
CCDC78-203ENST00000423653 C11orf57Q6ZUT1 292 aaPredicted RBP17.37■□□□□ 0.37
CCDC78-203ENST00000423653 PIP4P1Q86T03 277 aa17.37■□□□□ 0.37
CCDC78-203ENST00000423653 C1orf131Q8NDD1 294 aaKnown RBP17.37■□□□□ 0.37
CCDC78-203ENST00000423653 RNF34Q969K3 372 aa17.37■□□□□ 0.37
CCDC78-203ENST00000423653 SLC2A13Q96QE2 648 aa17.37■□□□□ 0.37
CCDC78-203ENST00000423653 BTBD1Q9H0C5 482 aa17.37■□□□□ 0.37
CCDC78-203ENST00000423653 NDST4Q9H3R1 872 aa17.37■□□□□ 0.37
CCDC78-203ENST00000423653 SIX2Q9NPC8 291 aa17.37■□□□□ 0.37
CCDC78-203ENST00000423653 KIAA1522Q9P206 1035 aaPredicted RBP17.37■□□□□ 0.37
CCDC78-203ENST00000423653 DNAJC12Q9UKB3 198 aa17.37■□□□□ 0.37
CCDC78-203ENST00000423653 SCML1Q9UN30 329 aa17.37■□□□□ 0.37
CCDC78-203ENST00000423653 CACNA1EQ15878 2313 aa17.37■□□□□ 0.37
CCDC78-203ENST00000423653 KCNU1A8MYU2 1149 aa17.36■□□□□ 0.37
CCDC78-203ENST00000423653 PES1O00541 588 aaKnown RBP17.36■□□□□ 0.37
CCDC78-203ENST00000423653 SEMA4FO95754 770 aa17.36■□□□□ 0.37
CCDC78-203ENST00000423653 CER1O95813 267 aa17.36■□□□□ 0.37
CCDC78-203ENST00000423653 SRPRAP08240 638 aaKnown RBP17.36■□□□□ 0.37
CCDC78-203ENST00000423653 ANP32AP39687 249 aaKnown RBP17.36■□□□□ 0.37
CCDC78-203ENST00000423653 RPS14P62263 151 aaKnown RBP17.36■□□□□ 0.37
CCDC78-203ENST00000423653 HNRNPA1L2Q32P51 320 aaKnown RBP17.36■□□□□ 0.37
CCDC78-203ENST00000423653 VWA3BQ502W6 1294 aa17.36■□□□□ 0.37
CCDC78-203ENST00000423653 CFAP52Q8N1V2 620 aa17.36■□□□□ 0.37
CCDC78-203ENST00000423653 LMLNQ96KR4 655 aa17.36■□□□□ 0.37
CCDC78-203ENST00000423653 TUBGCP2Q9BSJ2 902 aa17.36■□□□□ 0.37
CCDC78-203ENST00000423653 XPO7Q9UIA9 1087 aaKnown RBP17.36■□□□□ 0.37
CCDC78-203ENST00000423653 EPG5Q9HCE0 2579 aa17.35■□□□□ 0.37
CCDC78-203ENST00000423653 NYNRINQ9P2P1 1898 aaKnown RBP17.35■□□□□ 0.37
CCDC78-203ENST00000423653 SYNJ2BP-COX16A0A087WUM0 186 aa17.35■□□□□ 0.37
CCDC78-203ENST00000423653 A0A1B0GVM2 712 aa17.35■□□□□ 0.37
CCDC78-203ENST00000423653 TCAF2A6NFQ2 919 aa17.35■□□□□ 0.37
CCDC78-203ENST00000423653 DAB1O75553 588 aa17.35■□□□□ 0.37
CCDC78-203ENST00000423653 RDXP35241 583 aaKnown RBP17.35■□□□□ 0.37
CCDC78-203ENST00000423653 OXCT1P55809 520 aa17.35■□□□□ 0.37
CCDC78-203ENST00000423653 SLC12A1Q13621 1099 aa17.35■□□□□ 0.37
CCDC78-203ENST00000423653 RAPGEF1Q13905 1077 aa17.35■□□□□ 0.37
CCDC78-203ENST00000423653 ARID5BQ14865 1188 aa17.35■□□□□ 0.37
CCDC78-203ENST00000423653 CT47A1Q5JQC4 288 aaPredicted RBP17.35■□□□□ 0.37
CCDC78-203ENST00000423653 OR6B2Q6IFH4 312 aa17.35■□□□□ 0.37
CCDC78-203ENST00000423653 IL27RAQ6UWB1 636 aa17.35■□□□□ 0.37
CCDC78-203ENST00000423653 OLFML1Q6UWY5 402 aa17.35■□□□□ 0.37
CCDC78-203ENST00000423653 FAM183BPQ6ZVS7 135 aa17.35■□□□□ 0.37
CCDC78-203ENST00000423653 USP30Q70CQ3 517 aa17.35■□□□□ 0.37
CCDC78-203ENST00000423653 SLC26A9Q7LBE3 791 aa17.35■□□□□ 0.37
CCDC78-203ENST00000423653 ZDHHC17Q8IUH5 632 aa17.35■□□□□ 0.37
CCDC78-203ENST00000423653 DEFB106AQ8N104 65 aa17.35■□□□□ 0.37
CCDC78-203ENST00000423653 MYEOVQ96EZ4 313 aa17.35■□□□□ 0.37
CCDC78-203ENST00000423653 MYO19Q96H55 970 aa17.35■□□□□ 0.37
CCDC78-203ENST00000423653 RSPH9Q9H1X1 276 aaPredicted RBP17.35■□□□□ 0.37
CCDC78-203ENST00000423653 PDCL3Q9H2J4 239 aa17.35■□□□□ 0.37
CCDC78-203ENST00000423653 SGK2Q9HBY8 427 aa17.35■□□□□ 0.37
CCDC78-203ENST00000423653 COX16Q9P0S2 106 aa17.35■□□□□ 0.37
CCDC78-203ENST00000423653 EIF2B4Q9UI10 523 aaKnown RBP17.35■□□□□ 0.37
CCDC78-203ENST00000423653 INTS6Q9UL03 887 aaKnown RBP17.35■□□□□ 0.37
CCDC78-203ENST00000423653 ERVW-1Q9UQF0 538 aa17.35■□□□□ 0.37
CCDC78-203ENST00000423653 NCKAP1Q9Y2A7 1128 aa17.35■□□□□ 0.37
CCDC78-203ENST00000423653 ITIH6Q6UXX5 1313 aa17.35■□□□□ 0.37
CCDC78-203ENST00000423653 CHD8Q9HCK8 2581 aa17.35■□□□□ 0.37
CCDC78-203ENST00000423653 EDDM13A0A1B0GTR0 161 aa17.34■□□□□ 0.37
CCDC78-203ENST00000423653 ACSL1P33121 698 aa17.34■□□□□ 0.37
CCDC78-203ENST00000423653 NNMTP40261 264 aa17.34■□□□□ 0.37
CCDC78-203ENST00000423653 AFF3P51826 1226 aaKnown RBP17.34■□□□□ 0.37
CCDC78-203ENST00000423653 PITX1P78337 314 aaPredicted RBP17.34■□□□□ 0.37
CCDC78-203ENST00000423653 SIM1P81133 766 aaPredicted RBP17.34■□□□□ 0.37
CCDC78-203ENST00000423653 ECT2LQ008S8 904 aa17.34■□□□□ 0.37
CCDC78-203ENST00000423653 EIF4EBP2Q13542 120 aaPredicted RBP17.34■□□□□ 0.37
CCDC78-203ENST00000423653 KCNJ12Q14500 433 aa17.34■□□□□ 0.37
CCDC78-203ENST00000423653 TAF5Q15542 800 aa17.34■□□□□ 0.37
CCDC78-203ENST00000423653 TEAD4Q15561 434 aa17.34■□□□□ 0.37
CCDC78-203ENST00000423653 FSCBQ5H9T9 825 aa17.34■□□□□ 0.37
CCDC78-203ENST00000423653 MIIPQ5JXC2 388 aa17.34■□□□□ 0.37
CCDC78-203ENST00000423653 LRSAM1Q6UWE0 723 aa17.34■□□□□ 0.37
CCDC78-203ENST00000423653 SLC47A2Q86VL8 602 aa17.34■□□□□ 0.37
CCDC78-203ENST00000423653 FAM71AQ8IYT1 594 aa17.34■□□□□ 0.37
CCDC78-203ENST00000423653 OR2I1PQ8NGU4 316 aa17.34■□□□□ 0.37
CCDC78-203ENST00000423653 GANCQ8TET4 914 aa17.34■□□□□ 0.37
CCDC78-203ENST00000423653 PPP1R9BQ96SB3 815 aa17.34■□□□□ 0.37
CCDC78-203ENST00000423653 PABPC3Q9H361 631 aaKnown RBP17.34■□□□□ 0.37
CCDC78-203ENST00000423653 C6orf106Q9H6K1 298 aaPredicted RBP17.34■□□□□ 0.37
CCDC78-203ENST00000423653 RRN3Q9NYV6 651 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms