RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 PACSIN1Q9BY11 444 aa16.26■□□□□ 0.19
BRAT1-202ENST00000421712 KIAA1522Q9P206 1035 aaPredicted RBP16.26■□□□□ 0.19
BRAT1-202ENST00000421712 OR12D3Q9UGF7 316 aa16.26■□□□□ 0.19
BRAT1-202ENST00000421712 PCSK1NQ9UHG2 260 aa16.26■□□□□ 0.19
BRAT1-202ENST00000421712 RAPGEFL1Q9UHV5 662 aa16.26■□□□□ 0.19
BRAT1-202ENST00000421712 ANAPC7Q9UJX3 599 aa16.26■□□□□ 0.19
BRAT1-202ENST00000421712 GGA2Q9UJY4 613 aa16.26■□□□□ 0.19
BRAT1-202ENST00000421712 ZNF318Q5VUA4 2279 aa16.25■□□□□ 0.19
BRAT1-202ENST00000421712 MYO18AQ92614 2054 aaKnown RBP16.25■□□□□ 0.19
BRAT1-202ENST00000421712 CACNA1IQ9P0X4 2223 aa16.25■□□□□ 0.19
BRAT1-202ENST00000421712 A0A1B0GVM2 712 aa16.25■□□□□ 0.19
BRAT1-202ENST00000421712 GOLGA6L3A6NEY3 463 aa16.25■□□□□ 0.19
BRAT1-202ENST00000421712 TCAF2A6NFQ2 919 aa16.25■□□□□ 0.19
BRAT1-202ENST00000421712 E9PAM4 449 aa16.25■□□□□ 0.19
BRAT1-202ENST00000421712 MYO1FO00160 1098 aa16.25■□□□□ 0.19
BRAT1-202ENST00000421712 TIMM44O43615 452 aa16.25■□□□□ 0.19
BRAT1-202ENST00000421712 POLR2EP19388 210 aaKnown RBP16.25■□□□□ 0.19
BRAT1-202ENST00000421712 CD70P32970 193 aa16.25■□□□□ 0.19
BRAT1-202ENST00000421712 SSR1P43307 286 aaKnown RBP16.25■□□□□ 0.19
BRAT1-202ENST00000421712 LMAN2Q12907 356 aa16.25■□□□□ 0.19
BRAT1-202ENST00000421712 SPA17Q15506 151 aa16.25■□□□□ 0.19
BRAT1-202ENST00000421712 EFHC2Q5JST6 749 aa16.25■□□□□ 0.19
BRAT1-202ENST00000421712 RWDD4Q6NW29 188 aaKnown RBP16.25■□□□□ 0.19
BRAT1-202ENST00000421712 TSSK4Q6SA08 328 aa16.25■□□□□ 0.19
BRAT1-202ENST00000421712 CCDC170Q8IYT3 715 aa16.25■□□□□ 0.19
BRAT1-202ENST00000421712 CHPFQ8IZ52 775 aa16.25■□□□□ 0.19
BRAT1-202ENST00000421712 AHI1Q8N157 1196 aa16.25■□□□□ 0.19
BRAT1-202ENST00000421712 CCAR2Q8N163 923 aaKnown RBP16.25■□□□□ 0.19
BRAT1-202ENST00000421712 TXNDC5Q8NBS9 432 aaKnown RBP16.25■□□□□ 0.19
BRAT1-202ENST00000421712 PRSS33Q8NF86 280 aa16.25■□□□□ 0.19
BRAT1-202ENST00000421712 ZNF564Q8TBZ8 553 aaPredicted RBP16.25■□□□□ 0.19
BRAT1-202ENST00000421712 WFDC5Q8TCV5 224 aa16.25■□□□□ 0.19
BRAT1-202ENST00000421712 KCNV2Q8TDN2 545 aa16.25■□□□□ 0.19
BRAT1-202ENST00000421712 WFIKKN2Q8TEU8 576 aa16.25■□□□□ 0.19
BRAT1-202ENST00000421712 BTBD6Q96KE9 485 aa16.25■□□□□ 0.19
BRAT1-202ENST00000421712 KCNH6Q9H252 994 aa16.25■□□□□ 0.19
BRAT1-202ENST00000421712 POLR3BQ9NW08 1133 aaPredicted RBP16.25■□□□□ 0.19
BRAT1-202ENST00000421712 ELOVL2Q9NXB9 296 aa16.25■□□□□ 0.19
BRAT1-202ENST00000421712 IP6K2Q9UHH9 426 aa16.25■□□□□ 0.19
BRAT1-202ENST00000421712 NENFQ9UMX5 172 aa16.25■□□□□ 0.19
BRAT1-202ENST00000421712 KIAA1549LQ6ZVL6 1849 aa16.24■□□□□ 0.19
BRAT1-202ENST00000421712 CHURC1-FNTBB4DL54 471 aa16.24■□□□□ 0.19
BRAT1-202ENST00000421712 PRPSAP2O60256 369 aa16.24■□□□□ 0.19
BRAT1-202ENST00000421712 IPO7O95373 1038 aaKnown RBP16.24■□□□□ 0.19
BRAT1-202ENST00000421712 MOCS3O95396 460 aa16.24■□□□□ 0.19
BRAT1-202ENST00000421712 TMEM253P0C7T8 217 aa16.24■□□□□ 0.19
BRAT1-202ENST00000421712 WASP42768 502 aa16.24■□□□□ 0.19
BRAT1-202ENST00000421712 MAGEA1P43355 309 aa16.24■□□□□ 0.19
BRAT1-202ENST00000421712 KIR2DL1P43626 348 aaPredicted RBP16.24■□□□□ 0.19
BRAT1-202ENST00000421712 IRAK1P51617 712 aa16.24■□□□□ 0.19
BRAT1-202ENST00000421712 PTPN5P54829 565 aa16.24■□□□□ 0.19
BRAT1-202ENST00000421712 CDH4P55283 916 aa16.24■□□□□ 0.19
BRAT1-202ENST00000421712 PIGHQ14442 188 aaPredicted RBP16.24■□□□□ 0.19
BRAT1-202ENST00000421712 DMC1Q14565 340 aa16.24■□□□□ 0.19
BRAT1-202ENST00000421712 E2F5Q15329 346 aa16.24■□□□□ 0.19
BRAT1-202ENST00000421712 HSF5Q4G112 596 aaPredicted RBP16.24■□□□□ 0.19
BRAT1-202ENST00000421712 FSCBQ5H9T9 825 aa16.24■□□□□ 0.19
BRAT1-202ENST00000421712 EOGTQ5NDL2 527 aa16.24■□□□□ 0.19
BRAT1-202ENST00000421712 EGFLAMQ63HQ2 1017 aa16.24■□□□□ 0.19
BRAT1-202ENST00000421712 TMTC1Q8IUR5 882 aa16.24■□□□□ 0.19
BRAT1-202ENST00000421712 IL17RCQ8NAC3 791 aa16.24■□□□□ 0.19
BRAT1-202ENST00000421712 SORCS1Q8WY21 1168 aa16.24■□□□□ 0.19
BRAT1-202ENST00000421712 NTAN1Q96AB6 310 aa16.24■□□□□ 0.19
BRAT1-202ENST00000421712 NCAPGQ9BPX3 1015 aa16.24■□□□□ 0.19
BRAT1-202ENST00000421712 IRF2BPLQ9H1B7 796 aa16.24■□□□□ 0.19
BRAT1-202ENST00000421712 OSBPL2Q9H1P3 480 aa16.24■□□□□ 0.19
BRAT1-202ENST00000421712 C2orf42Q9NWW7 574 aa16.24■□□□□ 0.19
BRAT1-202ENST00000421712 MPP6Q9NZW5 540 aa16.24■□□□□ 0.19
BRAT1-202ENST00000421712 UVRAGQ9P2Y5 699 aa16.24■□□□□ 0.19
BRAT1-202ENST00000421712 PLA2G4CQ9UP65 541 aa16.24■□□□□ 0.19
BRAT1-202ENST00000421712 STARD13Q9Y3M8 1113 aa16.24■□□□□ 0.19
BRAT1-202ENST00000421712 CLDN11O75508 207 aa16.23■□□□□ 0.19
BRAT1-202ENST00000421712 CNTN5O94779 1100 aa16.23■□□□□ 0.19
BRAT1-202ENST00000421712 ATP5BP06576 529 aaKnown RBP16.23■□□□□ 0.19
BRAT1-202ENST00000421712 MIPP30301 263 aa16.23■□□□□ 0.19
BRAT1-202ENST00000421712 NTSR1P30989 418 aa16.23■□□□□ 0.19
BRAT1-202ENST00000421712 NUMBP49757 651 aa16.23■□□□□ 0.19
BRAT1-202ENST00000421712 AIF1P55008 147 aa16.23■□□□□ 0.19
BRAT1-202ENST00000421712 OXCT1P55809 520 aa16.23■□□□□ 0.19
BRAT1-202ENST00000421712 ZNF252P-AS1Q0IIN9 211 aa16.23■□□□□ 0.19
BRAT1-202ENST00000421712 ACAP1Q15027 740 aa16.23■□□□□ 0.19
BRAT1-202ENST00000421712 EIF4HQ15056 248 aaKnown RBP16.23■□□□□ 0.19
BRAT1-202ENST00000421712 MBLAC2Q68D91 279 aa16.23■□□□□ 0.19
BRAT1-202ENST00000421712 MAMSTRQ6ZN01 415 aa16.23■□□□□ 0.19
BRAT1-202ENST00000421712 SYT13Q7L8C5 426 aa16.23■□□□□ 0.19
BRAT1-202ENST00000421712 TFAP2DQ7Z6R9 452 aa16.23■□□□□ 0.19
BRAT1-202ENST00000421712 CYB5D2Q8WUJ1 264 aa16.23■□□□□ 0.19
BRAT1-202ENST00000421712 ATOH1Q92858 354 aaPredicted RBP16.23■□□□□ 0.19
BRAT1-202ENST00000421712 PPP1R9BQ96SB3 815 aa16.23■□□□□ 0.19
BRAT1-202ENST00000421712 BAG1Q99933 345 aaPredicted RBP16.23■□□□□ 0.19
BRAT1-202ENST00000421712 MAGEB5Q9BZ81 275 aa16.23■□□□□ 0.19
BRAT1-202ENST00000421712 ZYG11BQ9C0D3 744 aa16.23■□□□□ 0.19
BRAT1-202ENST00000421712 GRPEL1Q9HAV7 217 aa16.23■□□□□ 0.19
BRAT1-202ENST00000421712 LUC7LQ9NQ29 371 aaKnown RBP16.23■□□□□ 0.19
BRAT1-202ENST00000421712 FBXO4Q9UKT5 387 aa16.23■□□□□ 0.19
BRAT1-202ENST00000421712 FZD10Q9ULW2 581 aa16.23■□□□□ 0.19
BRAT1-202ENST00000421712 MMP17Q9ULZ9 603 aa16.23■□□□□ 0.19
BRAT1-202ENST00000421712 SOWAHDA6NJG2 315 aa16.22■□□□□ 0.19
BRAT1-202ENST00000421712 DRGXA6NNA5 263 aa16.22■□□□□ 0.19
BRAT1-202ENST00000421712 TMEM110-MUSTN1A8MSY1 372 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms