RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 ODF2Q5BJF6 829 aa18.08■□□□□ 0.49
LINC00271-201ENST00000421378 CIR1Q86X95 450 aaPredicted RBP18.08■□□□□ 0.49
LINC00271-201ENST00000421378 KCTD6Q8NC69 237 aa18.08■□□□□ 0.49
LINC00271-201ENST00000421378 ZYG11BQ9C0D3 744 aa18.08■□□□□ 0.49
LINC00271-201ENST00000421378 DDX56Q9NY93 547 aaKnown RBP18.08■□□□□ 0.49
LINC00271-201ENST00000421378 MPP6Q9NZW5 540 aa18.08■□□□□ 0.49
LINC00271-201ENST00000421378 STIM2Q9P246 746 aa18.08■□□□□ 0.49
LINC00271-201ENST00000421378 NEU3Q9UQ49 428 aa18.08■□□□□ 0.49
LINC00271-201ENST00000421378 PIAS3Q9Y6X2 628 aa18.08■□□□□ 0.49
LINC00271-201ENST00000421378 LRRD1A4D1F6 860 aa18.08■□□□□ 0.48
LINC00271-201ENST00000421378 DRGXA6NNA5 263 aa18.08■□□□□ 0.48
LINC00271-201ENST00000421378 MIF4GDA9UHW6 222 aaKnown RBP18.08■□□□□ 0.48
LINC00271-201ENST00000421378 EEF2KO00418 725 aaKnown RBP18.08■□□□□ 0.48
LINC00271-201ENST00000421378 CACNG3O60359 315 aa18.08■□□□□ 0.48
LINC00271-201ENST00000421378 GOT1P17174 413 aa18.08■□□□□ 0.48
LINC00271-201ENST00000421378 HOXC13P31276 330 aa18.08■□□□□ 0.48
LINC00271-201ENST00000421378 SOX9P48436 509 aa18.08■□□□□ 0.48
LINC00271-201ENST00000421378 MARCKSL1P49006 195 aa18.08■□□□□ 0.48
LINC00271-201ENST00000421378 CDH18Q13634 790 aa18.08■□□□□ 0.48
LINC00271-201ENST00000421378 PDK2Q15119 407 aa18.08■□□□□ 0.48
LINC00271-201ENST00000421378 GAB4Q2WGN9 574 aa18.08■□□□□ 0.48
LINC00271-201ENST00000421378 ARTNQ5T4W7 220 aa18.08■□□□□ 0.48
LINC00271-201ENST00000421378 RFX8Q6ZV50 586 aa18.08■□□□□ 0.48
LINC00271-201ENST00000421378 MAP7D3Q8IWC1 876 aa18.08■□□□□ 0.48
LINC00271-201ENST00000421378 NAT16Q8N8M0 369 aa18.08■□□□□ 0.48
LINC00271-201ENST00000421378 KRT35Q92764 455 aa18.08■□□□□ 0.48
LINC00271-201ENST00000421378 XPO6Q96QU8 1125 aaKnown RBP18.08■□□□□ 0.48
LINC00271-201ENST00000421378 CALN1Q9BXU9 219 aa18.08■□□□□ 0.48
LINC00271-201ENST00000421378 PCDH18Q9HCL0 1135 aa18.08■□□□□ 0.48
LINC00271-201ENST00000421378 PACSIN2Q9UNF0 486 aaPredicted RBP18.08■□□□□ 0.48
LINC00271-201ENST00000421378 ZKSCAN5Q9Y2L8 839 aa18.08■□□□□ 0.48
LINC00271-201ENST00000421378 SPECC1L-ADORA2AF8WAN1 911 aa18.07■□□□□ 0.48
LINC00271-201ENST00000421378 H3BRJ5 948 aa18.07■□□□□ 0.48
LINC00271-201ENST00000421378 CLDN11O75508 207 aa18.07■□□□□ 0.48
LINC00271-201ENST00000421378 LUC7L3O95232 432 aaKnown RBP18.07■□□□□ 0.48
LINC00271-201ENST00000421378 KRT1P04264 644 aa18.07■□□□□ 0.48
LINC00271-201ENST00000421378 CTNNA2P26232 953 aa18.07■□□□□ 0.48
LINC00271-201ENST00000421378 CTHP32929 405 aa18.07■□□□□ 0.48
LINC00271-201ENST00000421378 CDH4P55283 916 aa18.07■□□□□ 0.48
LINC00271-201ENST00000421378 ALFQ53S48 1182 aa18.07■□□□□ 0.48
LINC00271-201ENST00000421378 RNF43Q68DV7 783 aa18.07■□□□□ 0.48
LINC00271-201ENST00000421378 CHST9Q7L1S5 443 aa18.07■□□□□ 0.48
LINC00271-201ENST00000421378 C12orf40Q86WS4 652 aa18.07■□□□□ 0.48
LINC00271-201ENST00000421378 RALGPS2Q86X27 583 aaPredicted RBP18.07■□□□□ 0.48
LINC00271-201ENST00000421378 MFN1Q8IWA4 741 aa18.07■□□□□ 0.48
LINC00271-201ENST00000421378 CCDC117Q8IWD4 279 aaPredicted RBP18.07■□□□□ 0.48
LINC00271-201ENST00000421378 ETFBKMTQ8IXQ9 262 aa18.07■□□□□ 0.48
LINC00271-201ENST00000421378 KATNAL2Q8IYT4 538 aa18.07■□□□□ 0.48
LINC00271-201ENST00000421378 C17orf53Q8N3J3 647 aaPredicted RBP18.07■□□□□ 0.48
LINC00271-201ENST00000421378 UBL4BQ8N7F7 174 aa18.07■□□□□ 0.48
LINC00271-201ENST00000421378 FAM71BQ8TC56 605 aa18.07■□□□□ 0.48
LINC00271-201ENST00000421378 UBE2Q2Q8WVN8 375 aa18.07■□□□□ 0.48
LINC00271-201ENST00000421378 RAPGEF5Q92565 580 aa18.07■□□□□ 0.48
LINC00271-201ENST00000421378 CHFRQ96EP1 664 aa18.07■□□□□ 0.48
LINC00271-201ENST00000421378 C8orf33Q9H7E9 229 aaPredicted RBP18.07■□□□□ 0.48
LINC00271-201ENST00000421378 CATSPERBQ9H7T0 1116 aa18.07■□□□□ 0.48
LINC00271-201ENST00000421378 CWC15Q9P013 229 aaKnown RBP18.07■□□□□ 0.48
LINC00271-201ENST00000421378 RCOR3Q9P2K3 495 aaPredicted RBP18.07■□□□□ 0.48
LINC00271-201ENST00000421378 FBXL21Q9UKT6 434 aa18.07■□□□□ 0.48
LINC00271-201ENST00000421378 PCDHA3Q9Y5H8 950 aa18.07■□□□□ 0.48
LINC00271-201ENST00000421378 DOCK4Q8N1I0 1966 aa18.06■□□□□ 0.48
LINC00271-201ENST00000421378 H0Y626 953 aa18.06■□□□□ 0.48
LINC00271-201ENST00000421378 FGF10O15520 208 aaPredicted RBP18.06■□□□□ 0.48
LINC00271-201ENST00000421378 DAPK3O43293 454 aa18.06■□□□□ 0.48
LINC00271-201ENST00000421378 CNTN5O94779 1100 aa18.06■□□□□ 0.48
LINC00271-201ENST00000421378 CD48P09326 243 aa18.06■□□□□ 0.48
LINC00271-201ENST00000421378 GLULP15104 373 aa18.06■□□□□ 0.48
LINC00271-201ENST00000421378 MSNP26038 577 aaKnown RBP18.06■□□□□ 0.48
LINC00271-201ENST00000421378 EIF2DP41214 584 aaKnown RBP18.06■□□□□ 0.48
LINC00271-201ENST00000421378 ARSEP51690 589 aa18.06■□□□□ 0.48
LINC00271-201ENST00000421378 DPYSL3Q14195 570 aa18.06■□□□□ 0.48
LINC00271-201ENST00000421378 SLC44A4Q53GD3 710 aa18.06■□□□□ 0.48
LINC00271-201ENST00000421378 TFAP2DQ7Z6R9 452 aa18.06■□□□□ 0.48
LINC00271-201ENST00000421378 CARNMT1Q8N4J0 409 aa18.06■□□□□ 0.48
LINC00271-201ENST00000421378 ZNF557Q8N988 423 aaPredicted RBP18.06■□□□□ 0.48
LINC00271-201ENST00000421378 MSANTD3Q96H12 275 aa18.06■□□□□ 0.48
LINC00271-201ENST00000421378 HES6Q96HZ4 224 aa18.06■□□□□ 0.48
LINC00271-201ENST00000421378 CSPG4P5Q96PW8 444 aa18.06■□□□□ 0.48
LINC00271-201ENST00000421378 ZNF670Q9BS34 389 aa18.06■□□□□ 0.48
LINC00271-201ENST00000421378 ARHGEF3Q9NR81 526 aa18.06■□□□□ 0.48
LINC00271-201ENST00000421378 DNAJC17Q9NVM6 304 aaKnown RBP18.06■□□□□ 0.48
LINC00271-201ENST00000421378 WNT16Q9UBV4 365 aa18.06■□□□□ 0.48
LINC00271-201ENST00000421378 PI4K2BG5E9Z4 385 aa18.05■□□□□ 0.48
LINC00271-201ENST00000421378 TULP3O75386 442 aa18.05■□□□□ 0.48
LINC00271-201ENST00000421378 RHOQP17081 205 aa18.05■□□□□ 0.48
LINC00271-201ENST00000421378 KDELR1P24390 212 aa18.05■□□□□ 0.48
LINC00271-201ENST00000421378 HCAR3P49019 387 aa18.05■□□□□ 0.48
LINC00271-201ENST00000421378 MLF2Q15773 248 aaPredicted RBP18.05■□□□□ 0.48
LINC00271-201ENST00000421378 ZNF569Q5MCW4 686 aa18.05■□□□□ 0.48
LINC00271-201ENST00000421378 IER5LQ5T953 404 aa18.05■□□□□ 0.48
LINC00271-201ENST00000421378 MEI1Q5TIA1 1274 aa18.05■□□□□ 0.48
LINC00271-201ENST00000421378 C1orf228Q6PIY5 440 aa18.05■□□□□ 0.48
LINC00271-201ENST00000421378 TPRG1Q6ZUI0 275 aa18.05■□□□□ 0.48
LINC00271-201ENST00000421378 TSC1Q92574 1164 aa18.05■□□□□ 0.48
LINC00271-201ENST00000421378 SLC2A11Q9BYW1 496 aa18.05■□□□□ 0.48
LINC00271-201ENST00000421378 RETREG1Q9H6L5 497 aa18.05■□□□□ 0.48
LINC00271-201ENST00000421378 DEC1Q9P2X7 70 aa18.05■□□□□ 0.48
LINC00271-201ENST00000421378 CA14Q9ULX7 337 aa18.05■□□□□ 0.48
LINC00271-201ENST00000421378 CLEC4EQ9ULY5 219 aa18.05■□□□□ 0.48
LINC00271-201ENST00000421378 KIAA1549LQ6ZVL6 1849 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms