RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 GGT7Q9UJ14 662 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 NUDT5Q9UKK9 219 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 ASB3Q9Y575 518 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 USH1CQ9Y6N9 552 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 CDH16O75309 829 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 TTC4O95801 387 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 TFE3P19532 575 aaPredicted RBP13.29□□□□□ -0.28
LINC00642-201ENST00000419459 ALDH3A1P30838 453 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 ACADSBP45954 432 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 PEX5P50542 639 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 DAOAP59103 153 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 MRPS5P82675 430 aaKnown RBP13.29□□□□□ -0.28
LINC00642-201ENST00000419459 SLC6A3Q01959 620 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 CREMQ03060 361 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 MESDQ14696 234 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 CDO1Q16878 200 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 LRIT3Q3SXY7 679 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 RAB6CQ53S08 254 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 PPP1R15BQ5SWA1 713 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 SH3PXD2AQ5TCZ1 1133 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 RHBDF2Q6PJF5 856 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 GALNT15Q8N3T1 639 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 MGARPQ8TDB4 240 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 EDEM1Q92611 657 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 C8orf48Q96LL4 319 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 CFAP57Q96MR6 1250 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 ADAM33Q9BZ11 813 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 RAB6CQ9H0N0 254 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 PNPLA8Q9NP80 782 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 KCNK9Q9NPC2 374 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 AVENQ9NQS1 362 aaPredicted RBP13.29□□□□□ -0.28
LINC00642-201ENST00000419459 FBXW11Q9UKB1 542 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 A0A0C4DFX4 3053 aa13.28□□□□□ -0.28
LINC00642-201ENST00000419459 CLASP2O75122 1294 aaKnown RBP13.28□□□□□ -0.28
LINC00642-201ENST00000419459 PCK1P35558 622 aa13.28□□□□□ -0.28
LINC00642-201ENST00000419459 ALDH1A3P47895 512 aa13.28□□□□□ -0.28
LINC00642-201ENST00000419459 TUFMP49411 452 aaKnown RBP13.28□□□□□ -0.28
LINC00642-201ENST00000419459 PITX1P78337 314 aaPredicted RBP13.28□□□□□ -0.28
LINC00642-201ENST00000419459 MGAT5Q09328 741 aa13.28□□□□□ -0.28
LINC00642-201ENST00000419459 CGB2Q6NT52 195 aa13.28□□□□□ -0.28
LINC00642-201ENST00000419459 GPR65Q8IYL9 337 aa13.28□□□□□ -0.28
LINC00642-201ENST00000419459 TCEAL8Q8IYN2 117 aa13.28□□□□□ -0.28
LINC00642-201ENST00000419459 MAIP1Q8WWC4 291 aa13.28□□□□□ -0.28
LINC00642-201ENST00000419459 UTP4Q969X6 686 aaKnown RBP13.28□□□□□ -0.28
LINC00642-201ENST00000419459 PITPNM3Q9BZ71 974 aa13.28□□□□□ -0.28
LINC00642-201ENST00000419459 IGFLR1Q9H665 355 aa13.28□□□□□ -0.28
LINC00642-201ENST00000419459 OSER1Q9NX31 292 aa13.28□□□□□ -0.28
LINC00642-201ENST00000419459 USP3Q9Y6I4 520 aa13.28□□□□□ -0.28
LINC00642-201ENST00000419459 OBSL1O75147 1896 aa13.28□□□□□ -0.28
LINC00642-201ENST00000419459 ANAPC1Q9H1A4 1944 aa13.27□□□□□ -0.28
LINC00642-201ENST00000419459 DPPA5A6NC42 116 aa13.27□□□□□ -0.28
LINC00642-201ENST00000419459 SIGLEC16A6NMB1 481 aa13.27□□□□□ -0.28
LINC00642-201ENST00000419459 CCL16O15467 120 aa13.27□□□□□ -0.28
LINC00642-201ENST00000419459 GSTA2P09210 222 aa13.27□□□□□ -0.28
LINC00642-201ENST00000419459 MXRA7P84157 204 aa13.27□□□□□ -0.28
LINC00642-201ENST00000419459 SF3A3Q12874 501 aaKnown RBP eCLIP13.27□□□□□ -0.28
LINC00642-201ENST00000419459 TAF10Q12962 218 aa13.27□□□□□ -0.28
LINC00642-201ENST00000419459 GRIN2CQ14957 1233 aa13.27□□□□□ -0.28
LINC00642-201ENST00000419459 C15orf59Q2T9L4 293 aaPredicted RBP13.27□□□□□ -0.28
LINC00642-201ENST00000419459 SYPL2Q5VXT5 272 aa13.27□□□□□ -0.28
LINC00642-201ENST00000419459 VSIG1Q86XK7 387 aa13.27□□□□□ -0.28
LINC00642-201ENST00000419459 RELL1Q8IUW5 271 aa13.27□□□□□ -0.28
LINC00642-201ENST00000419459 UHMK1Q8TAS1 419 aaKnown RBP13.27□□□□□ -0.28
LINC00642-201ENST00000419459 ADAM32Q8TC27 787 aa13.27□□□□□ -0.28
LINC00642-201ENST00000419459 CD101Q93033 1021 aa13.27□□□□□ -0.28
LINC00642-201ENST00000419459 LRRC37BQ96QE4 947 aa13.27□□□□□ -0.28
LINC00642-201ENST00000419459 CCDC77Q9BR77 488 aa13.27□□□□□ -0.28
LINC00642-201ENST00000419459 FAM167BQ9BTA0 163 aa13.27□□□□□ -0.28
LINC00642-201ENST00000419459 TLE6Q9H808 572 aa13.27□□□□□ -0.28
LINC00642-201ENST00000419459 DCLRE1BQ9H816 532 aa13.27□□□□□ -0.28
LINC00642-201ENST00000419459 NMUR1Q9HB89 426 aa13.27□□□□□ -0.28
LINC00642-201ENST00000419459 MRPL47Q9HD33 250 aaKnown RBP13.27□□□□□ -0.28
LINC00642-201ENST00000419459 CNGB3Q9NQW8 809 aa13.27□□□□□ -0.28
LINC00642-201ENST00000419459 UVRAGQ9P2Y5 699 aa13.27□□□□□ -0.28
LINC00642-201ENST00000419459 NAALADL1Q9UQQ1 740 aa13.27□□□□□ -0.28
LINC00642-201ENST00000419459 SCINQ9Y6U3 715 aa13.27□□□□□ -0.28
LINC00642-201ENST00000419459 C2orf16Q68DN1 1984 aa13.27□□□□□ -0.29
LINC00642-201ENST00000419459 SYNJ2BP-COX16A0A087WUM0 186 aa13.27□□□□□ -0.29
LINC00642-201ENST00000419459 TMEM191CA6NGB0 347 aa13.27□□□□□ -0.29
LINC00642-201ENST00000419459 SLC38A8A6NNN8 435 aa13.27□□□□□ -0.29
LINC00642-201ENST00000419459 NRG2O14511 850 aaPredicted RBP13.27□□□□□ -0.29
LINC00642-201ENST00000419459 SMIM24O75264 130 aa13.27□□□□□ -0.29
LINC00642-201ENST00000419459 FYNP06241 537 aa13.27□□□□□ -0.29
LINC00642-201ENST00000419459 TCF4P15884 667 aa13.27□□□□□ -0.29
LINC00642-201ENST00000419459 TAC1P20366 129 aa13.27□□□□□ -0.29
LINC00642-201ENST00000419459 RPL10AP62906 217 aaKnown RBP13.27□□□□□ -0.29
LINC00642-201ENST00000419459 PLD1Q13393 1074 aa13.27□□□□□ -0.29
LINC00642-201ENST00000419459 STAT4Q14765 748 aa13.27□□□□□ -0.29
LINC00642-201ENST00000419459 SIX1Q15475 284 aaPredicted RBP13.27□□□□□ -0.29
LINC00642-201ENST00000419459 DCAF6Q58WW2 860 aa13.27□□□□□ -0.29
LINC00642-201ENST00000419459 IRGCQ6NXR0 463 aa13.27□□□□□ -0.29
LINC00642-201ENST00000419459 PPP1R2P3Q6NXS1 205 aa13.27□□□□□ -0.29
LINC00642-201ENST00000419459 SLC26A9Q7LBE3 791 aa13.27□□□□□ -0.29
LINC00642-201ENST00000419459 ANKRD42Q8N9B4 389 aa13.27□□□□□ -0.29
LINC00642-201ENST00000419459 VN1R2Q8NFZ6 395 aa13.27□□□□□ -0.29
LINC00642-201ENST00000419459 GRK7Q8WTQ7 553 aa13.27□□□□□ -0.29
LINC00642-201ENST00000419459 FBXO32Q969P5 355 aa13.27□□□□□ -0.29
LINC00642-201ENST00000419459 SNF8Q96H20 258 aa13.27□□□□□ -0.29
LINC00642-201ENST00000419459 CYLDQ9NQC7 956 aa13.27□□□□□ -0.29
LINC00642-201ENST00000419459 HCFC1R1Q9NWW0 138 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms