RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 KHNYNO15037 678 aaKnown RBP16.16■□□□□ 0.18
ITGB1-204ENST00000417122 SCNN1AP37088 669 aa16.16■□□□□ 0.18
ITGB1-204ENST00000417122 STAT1P42224 750 aa16.16■□□□□ 0.18
ITGB1-204ENST00000417122 LIMK1P53667 647 aa16.16■□□□□ 0.18
ITGB1-204ENST00000417122 NOMO3P69849 1222 aa16.16■□□□□ 0.18
ITGB1-204ENST00000417122 CDR2Q01850 454 aa16.16■□□□□ 0.18
ITGB1-204ENST00000417122 MTA1Q13330 715 aa16.16■□□□□ 0.18
ITGB1-204ENST00000417122 FSCBQ5H9T9 825 aa16.16■□□□□ 0.18
ITGB1-204ENST00000417122 FAM102AQ5T9C2 384 aaPredicted RBP16.16■□□□□ 0.18
ITGB1-204ENST00000417122 NAA35Q5VZE5 725 aa16.16■□□□□ 0.18
ITGB1-204ENST00000417122 CAVIN1Q6NZI2 390 aaKnown RBP16.16■□□□□ 0.18
ITGB1-204ENST00000417122 APTXQ7Z2E3 356 aaKnown RBP16.16■□□□□ 0.18
ITGB1-204ENST00000417122 XYLT1Q86Y38 959 aa16.16■□□□□ 0.18
ITGB1-204ENST00000417122 ZNF366Q8N895 744 aa16.16■□□□□ 0.18
ITGB1-204ENST00000417122 SLC20A1Q8WUM9 679 aa16.16■□□□□ 0.18
ITGB1-204ENST00000417122 CPA5Q8WXQ8 436 aa16.16■□□□□ 0.18
ITGB1-204ENST00000417122 PRCCQ92733 491 aaPredicted RBP16.16■□□□□ 0.18
ITGB1-204ENST00000417122 TTC17Q96AE7 1141 aa16.16■□□□□ 0.18
ITGB1-204ENST00000417122 ERGIC2Q96RQ1 377 aa16.16■□□□□ 0.18
ITGB1-204ENST00000417122 NPY6RQ99463 290 aa16.16■□□□□ 0.18
ITGB1-204ENST00000417122 ITM2CQ9NQX7 267 aa16.16■□□□□ 0.18
ITGB1-204ENST00000417122 KIAA1522Q9P206 1035 aaPredicted RBP16.16■□□□□ 0.18
ITGB1-204ENST00000417122 INTS6Q9UL03 887 aaKnown RBP16.16■□□□□ 0.18
ITGB1-204ENST00000417122 STAP1Q9ULZ2 295 aa16.16■□□□□ 0.18
ITGB1-204ENST00000417122 DCDC2BA2VCK2 349 aa16.15■□□□□ 0.18
ITGB1-204ENST00000417122 PATE3B3GLJ2 98 aa16.15■□□□□ 0.18
ITGB1-204ENST00000417122 NDUFS2O75306 463 aa16.15■□□□□ 0.18
ITGB1-204ENST00000417122 MOCS3O95396 460 aa16.15■□□□□ 0.18
ITGB1-204ENST00000417122 ATP1A3P13637 1013 aa16.15■□□□□ 0.18
ITGB1-204ENST00000417122 CSKP41240 450 aa16.15■□□□□ 0.18
ITGB1-204ENST00000417122 DPP6P42658 865 aa16.15■□□□□ 0.18
ITGB1-204ENST00000417122 SULT1E1P49888 294 aa16.15■□□□□ 0.18
ITGB1-204ENST00000417122 FMO1Q01740 532 aa16.15■□□□□ 0.18
ITGB1-204ENST00000417122 ZNF33AQ06730 810 aa16.15■□□□□ 0.18
ITGB1-204ENST00000417122 CAMK2GQ13555 558 aaPredicted RBP16.15■□□□□ 0.18
ITGB1-204ENST00000417122 C2CD6Q53TS8 623 aa16.15■□□□□ 0.18
ITGB1-204ENST00000417122 PITRM1Q5JRX3 1037 aa16.15■□□□□ 0.18
ITGB1-204ENST00000417122 OTUD1Q5VV17 481 aaPredicted RBP16.15■□□□□ 0.18
ITGB1-204ENST00000417122 MMS22LQ6ZRQ5 1243 aa16.15■□□□□ 0.18
ITGB1-204ENST00000417122 SYT12Q8IV01 421 aa16.15■□□□□ 0.18
ITGB1-204ENST00000417122 OR2T3Q8NH03 318 aa16.15■□□□□ 0.18
ITGB1-204ENST00000417122 BPIFA3Q9BQP9 254 aa16.15■□□□□ 0.18
ITGB1-204ENST00000417122 ADAM33Q9BZ11 813 aa16.15■□□□□ 0.18
ITGB1-204ENST00000417122 TMEM74BQ9NUR3 256 aa16.15■□□□□ 0.18
ITGB1-204ENST00000417122 USP36Q9P275 1121 aaKnown RBP16.15■□□□□ 0.18
ITGB1-204ENST00000417122 WDR87Q6ZQQ6 2873 aa16.15■□□□□ 0.18
ITGB1-204ENST00000417122 ATXN2Q99700 1313 aaKnown RBP16.15■□□□□ 0.18
ITGB1-204ENST00000417122 SPTBN4Q9H254 2564 aa16.14■□□□□ 0.17
ITGB1-204ENST00000417122 LNP1A1A4G5 178 aa16.14■□□□□ 0.17
ITGB1-204ENST00000417122 GOLGA8SH3BPF8 625 aa16.14■□□□□ 0.17
ITGB1-204ENST00000417122 PAGE1O75459 146 aa16.14■□□□□ 0.17
ITGB1-204ENST00000417122 ASLP04424 464 aa16.14■□□□□ 0.17
ITGB1-204ENST00000417122 CYP1A1P04798 512 aaPredicted RBP16.14■□□□□ 0.17
ITGB1-204ENST00000417122 ACADMP11310 421 aa16.14■□□□□ 0.17
ITGB1-204ENST00000417122 CHRNB2P17787 502 aa16.14■□□□□ 0.17
ITGB1-204ENST00000417122 TFE3P19532 575 aaPredicted RBP16.14■□□□□ 0.17
ITGB1-204ENST00000417122 ITPKAP23677 461 aa16.14■□□□□ 0.17
ITGB1-204ENST00000417122 CD6P30203 668 aa16.14■□□□□ 0.17
ITGB1-204ENST00000417122 TPMTP51580 245 aa16.14■□□□□ 0.17
ITGB1-204ENST00000417122 ST8SIA6P61647 398 aa16.14■□□□□ 0.17
ITGB1-204ENST00000417122 RABGAP1LQ5R372 815 aa16.14■□□□□ 0.17
ITGB1-204ENST00000417122 STPG1Q5TH74 334 aa16.14■□□□□ 0.17
ITGB1-204ENST00000417122 TTC39BQ5VTQ0 682 aaPredicted RBP16.14■□□□□ 0.17
ITGB1-204ENST00000417122 IL31Q6EBC2 164 aa16.14■□□□□ 0.17
ITGB1-204ENST00000417122 FBXL22Q6P050 247 aa16.14■□□□□ 0.17
ITGB1-204ENST00000417122 SND1Q7KZF4 910 aaKnown RBP eCLIP16.14■□□□□ 0.17
ITGB1-204ENST00000417122 CIR1Q86X95 450 aaPredicted RBP16.14■□□□□ 0.17
ITGB1-204ENST00000417122 CACUL1Q86Y37 369 aa16.14■□□□□ 0.17
ITGB1-204ENST00000417122 SLC41A1Q8IVJ1 513 aa16.14■□□□□ 0.17
ITGB1-204ENST00000417122 CCAR2Q8N163 923 aaKnown RBP16.14■□□□□ 0.17
ITGB1-204ENST00000417122 NT5C3BQ969T7 300 aa16.14■□□□□ 0.17
ITGB1-204ENST00000417122 PGAP3Q96FM1 320 aaPredicted RBP16.14■□□□□ 0.17
ITGB1-204ENST00000417122 TOE1Q96GM8 510 aaKnown RBP16.14■□□□□ 0.17
ITGB1-204ENST00000417122 RPRD1AQ96P16 312 aaPredicted RBP16.14■□□□□ 0.17
ITGB1-204ENST00000417122 EDEM2Q9BV94 578 aa16.14■□□□□ 0.17
ITGB1-204ENST00000417122 WDCPQ9H6R7 721 aa16.14■□□□□ 0.17
ITGB1-204ENST00000417122 PIGVQ9NUD9 493 aa16.14■□□□□ 0.17
ITGB1-204ENST00000417122 WSB2Q9NYS7 404 aaPredicted RBP16.14■□□□□ 0.17
ITGB1-204ENST00000417122 SUN2Q9UH99 717 aa16.14■□□□□ 0.17
ITGB1-204ENST00000417122 PILRBQ9UKJ0 227 aa16.14■□□□□ 0.17
ITGB1-204ENST00000417122 HS3ST4Q9Y661 456 aa16.14■□□□□ 0.17
ITGB1-204ENST00000417122 DNAH14Q0VDD8 3507 aa16.14■□□□□ 0.17
ITGB1-204ENST00000417122 A0A1B0GVM2 712 aa16.13■□□□□ 0.17
ITGB1-204ENST00000417122 TCAF2A6NFQ2 919 aa16.13■□□□□ 0.17
ITGB1-204ENST00000417122 SMTNL1A8MU46 457 aa16.13■□□□□ 0.17
ITGB1-204ENST00000417122 F9P00740 461 aa16.13■□□□□ 0.17
ITGB1-204ENST00000417122 OXTRP30559 389 aa16.13■□□□□ 0.17
ITGB1-204ENST00000417122 CXCR3P49682 368 aa16.13■□□□□ 0.17
ITGB1-204ENST00000417122 IRX4P78413 519 aa16.13■□□□□ 0.17
ITGB1-204ENST00000417122 DEUP1Q05D60 604 aa16.13■□□□□ 0.17
ITGB1-204ENST00000417122 AUHQ13825 339 aaKnown RBP16.13■□□□□ 0.17
ITGB1-204ENST00000417122 PLEKHG6Q3KR16 790 aa16.13■□□□□ 0.17
ITGB1-204ENST00000417122 SLC25A52Q3SY17 297 aa16.13■□□□□ 0.17
ITGB1-204ENST00000417122 TRIM61Q5EBN2 209 aa16.13■□□□□ 0.17
ITGB1-204ENST00000417122 BRMS1LQ5PSV4 323 aa16.13■□□□□ 0.17
ITGB1-204ENST00000417122 PEAR1Q5VY43 1037 aaPredicted RBP16.13■□□□□ 0.17
ITGB1-204ENST00000417122 TRIM72Q6ZMU5 477 aa16.13■□□□□ 0.17
ITGB1-204ENST00000417122 DHX40Q8IX18 779 aaKnown RBP16.13■□□□□ 0.17
ITGB1-204ENST00000417122 APCDD1Q8J025 514 aa16.13■□□□□ 0.17
ITGB1-204ENST00000417122 IGSF8Q969P0 613 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms