RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 C9orf106Q8NAJ2 232 aa5.03□□□□□ -1.6
PTPRK-209ENST00000415046 CD99L2Q8TCZ2 262 aa5.03□□□□□ -1.6
PTPRK-209ENST00000415046 STAG1Q8WVM7 1258 aa5.03□□□□□ -1.6
PTPRK-209ENST00000415046 ESR2Q92731 530 aa5.03□□□□□ -1.6
PTPRK-209ENST00000415046 MAP4K1Q92918 833 aa5.03□□□□□ -1.6
PTPRK-209ENST00000415046 PARK7Q99497 189 aaKnown RBP5.03□□□□□ -1.6
PTPRK-209ENST00000415046 MTMR4Q9NYA4 1195 aa5.03□□□□□ -1.6
PTPRK-209ENST00000415046 SH3BP4Q9P0V3 963 aa5.03□□□□□ -1.6
PTPRK-209ENST00000415046 NYAP2Q9P242 653 aa5.03□□□□□ -1.6
PTPRK-209ENST00000415046 TMX2Q9Y320 296 aa5.03□□□□□ -1.6
PTPRK-209ENST00000415046 ALPK3Q96L96 1907 aa5.03□□□□□ -1.6
PTPRK-209ENST00000415046 MYH9P35579 1960 aaKnown RBP5.02□□□□□ -1.61
PTPRK-209ENST00000415046 WDR46O15213 610 aaKnown RBP5.02□□□□□ -1.61
PTPRK-209ENST00000415046 SLC16A3O15427 465 aaKnown RBP5.02□□□□□ -1.61
PTPRK-209ENST00000415046 TLR2O60603 784 aa5.02□□□□□ -1.61
PTPRK-209ENST00000415046 FLOT1O75955 427 aa5.02□□□□□ -1.61
PTPRK-209ENST00000415046 NDUFB10O96000 172 aa5.02□□□□□ -1.61
PTPRK-209ENST00000415046 IL6RP08887 468 aaPredicted RBP5.02□□□□□ -1.61
PTPRK-209ENST00000415046 FAM163BP0C2L3 166 aa5.02□□□□□ -1.61
PTPRK-209ENST00000415046 KELP23276 732 aa5.02□□□□□ -1.61
PTPRK-209ENST00000415046 MCCP23508 829 aa5.02□□□□□ -1.61
PTPRK-209ENST00000415046 CERS1P27544 350 aa5.02□□□□□ -1.61
PTPRK-209ENST00000415046 EPHB2P29323 1055 aa5.02□□□□□ -1.61
PTPRK-209ENST00000415046 PPIFP30405 207 aaKnown RBP5.02□□□□□ -1.61
PTPRK-209ENST00000415046 ALDH9A1P49189 494 aa5.02□□□□□ -1.61
PTPRK-209ENST00000415046 LOXL3P58215 753 aa5.02□□□□□ -1.61
PTPRK-209ENST00000415046 SP3Q02447 781 aa5.02□□□□□ -1.61
PTPRK-209ENST00000415046 TRDNQ13061 729 aa5.02□□□□□ -1.61
PTPRK-209ENST00000415046 PLS1Q14651 629 aa5.02□□□□□ -1.61
PTPRK-209ENST00000415046 WDR78Q5VTH9 848 aa5.02□□□□□ -1.61
PTPRK-209ENST00000415046 ICE2Q659A1 982 aa5.02□□□□□ -1.61
PTPRK-209ENST00000415046 CHST3Q7LGC8 479 aa5.02□□□□□ -1.61
PTPRK-209ENST00000415046 WDR53Q7Z5U6 358 aaPredicted RBP5.02□□□□□ -1.61
PTPRK-209ENST00000415046 SLC46A1Q96NT5 459 aa5.02□□□□□ -1.61
PTPRK-209ENST00000415046 P2RX7Q99572 595 aaKnown RBP5.02□□□□□ -1.61
PTPRK-209ENST00000415046 UBAC1Q9BSL1 405 aa5.02□□□□□ -1.61
PTPRK-209ENST00000415046 LRRC2Q9BYS8 371 aa5.02□□□□□ -1.61
PTPRK-209ENST00000415046 KRT23Q9C075 422 aa5.02□□□□□ -1.61
PTPRK-209ENST00000415046 ARHGAP39Q9C0H5 1083 aa5.02□□□□□ -1.61
PTPRK-209ENST00000415046 VCPKMTQ9H867 229 aa5.02□□□□□ -1.61
PTPRK-209ENST00000415046 ZCCHC17Q9NP64 241 aaKnown RBP5.02□□□□□ -1.61
PTPRK-209ENST00000415046 FBXO28Q9NVF7 368 aa5.02□□□□□ -1.61
PTPRK-209ENST00000415046 DLL3Q9NYJ7 618 aa5.02□□□□□ -1.61
PTPRK-209ENST00000415046 FRMPD2Q68DX3 1309 aaPredicted RBP5.01□□□□□ -1.61
PTPRK-209ENST00000415046 HTTP42858 3142 aa5.01□□□□□ -1.61
PTPRK-209ENST00000415046 TISP43B9A030 160 aa5.01□□□□□ -1.61
PTPRK-209ENST00000415046 TMEM232C9JQI7 657 aa5.01□□□□□ -1.61
PTPRK-209ENST00000415046 PROB1E7EW31 1015 aa5.01□□□□□ -1.61
PTPRK-209ENST00000415046 F5H6K3 240 aa5.01□□□□□ -1.61
PTPRK-209ENST00000415046 IFIT3O14879 490 aaKnown RBP5.01□□□□□ -1.61
PTPRK-209ENST00000415046 DCLK1O15075 740 aa5.01□□□□□ -1.61
PTPRK-209ENST00000415046 TP73O15350 636 aa5.01□□□□□ -1.61
PTPRK-209ENST00000415046 PRC1O43663 620 aa5.01□□□□□ -1.61
PTPRK-209ENST00000415046 DNAJB5O75953 348 aa5.01□□□□□ -1.61
PTPRK-209ENST00000415046 REC8O95072 547 aa5.01□□□□□ -1.61
PTPRK-209ENST00000415046 SNUPNO95149 360 aaKnown RBP5.01□□□□□ -1.61
PTPRK-209ENST00000415046 ONECUT2O95948 504 aa5.01□□□□□ -1.61
PTPRK-209ENST00000415046 POU2F2P09086 479 aa5.01□□□□□ -1.61
PTPRK-209ENST00000415046 ATXN1LP0C7T5 689 aaKnown RBP5.01□□□□□ -1.61
PTPRK-209ENST00000415046 NHLRC4P0CG21 123 aaPredicted RBP5.01□□□□□ -1.61
PTPRK-209ENST00000415046 TOP1P11387 765 aaKnown RBP5.01□□□□□ -1.61
PTPRK-209ENST00000415046 PCP11498 1178 aaKnown RBP5.01□□□□□ -1.61
PTPRK-209ENST00000415046 CPA1P15085 419 aa5.01□□□□□ -1.61
PTPRK-209ENST00000415046 LIPAP38571 399 aa5.01□□□□□ -1.61
PTPRK-209ENST00000415046 CLCN2P51788 898 aa5.01□□□□□ -1.61
PTPRK-209ENST00000415046 EEFSECP57772 596 aaKnown RBP5.01□□□□□ -1.61
PTPRK-209ENST00000415046 SNAP25P60880 206 aa5.01□□□□□ -1.61
PTPRK-209ENST00000415046 KLRC3Q07444 240 aa5.01□□□□□ -1.61
PTPRK-209ENST00000415046 PGS1Q32NB8 556 aa5.01□□□□□ -1.61
PTPRK-209ENST00000415046 MORN5Q5VZ52 161 aa5.01□□□□□ -1.61
PTPRK-209ENST00000415046 C11orf87Q6NUJ2 197 aa5.01□□□□□ -1.61
PTPRK-209ENST00000415046 CATSPERGQ6ZRH7 1159 aa5.01□□□□□ -1.61
PTPRK-209ENST00000415046 IQCA1Q86XH1 822 aa5.01□□□□□ -1.61
PTPRK-209ENST00000415046 RAB11FIP4Q86YS3 637 aa5.01□□□□□ -1.61
PTPRK-209ENST00000415046 CCAR1Q8IX12 1150 aaKnown RBP5.01□□□□□ -1.61
PTPRK-209ENST00000415046 ZNF366Q8N895 744 aa5.01□□□□□ -1.61
PTPRK-209ENST00000415046 ENAHQ8N8S7 591 aaPredicted RBP5.01□□□□□ -1.61
PTPRK-209ENST00000415046 FANCBQ8NB91 859 aa5.01□□□□□ -1.61
PTPRK-209ENST00000415046 NCOA7Q8NI08 942 aa5.01□□□□□ -1.61
PTPRK-209ENST00000415046 BRIX1Q8TDN6 353 aaKnown RBP5.01□□□□□ -1.61
PTPRK-209ENST00000415046 ERO1AQ96HE7 468 aa5.01□□□□□ -1.61
PTPRK-209ENST00000415046 C12orf42Q96LP6 360 aa5.01□□□□□ -1.61
PTPRK-209ENST00000415046 TCEANC2Q96MN5 208 aa5.01□□□□□ -1.61
PTPRK-209ENST00000415046 TMEM47Q9BQJ4 181 aa5.01□□□□□ -1.61
PTPRK-209ENST00000415046 KAT14Q9H8E8 782 aa5.01□□□□□ -1.61
PTPRK-209ENST00000415046 TXNRD2Q9NNW7 524 aa5.01□□□□□ -1.61
PTPRK-209ENST00000415046 PNPOQ9NVS9 261 aa5.01□□□□□ -1.61
PTPRK-209ENST00000415046 DDX56Q9NY93 547 aaKnown RBP5.01□□□□□ -1.61
PTPRK-209ENST00000415046 BTBD3Q9Y2F9 522 aa5.01□□□□□ -1.61
PTPRK-209ENST00000415046 SLC45A1Q9Y2W3 748 aa5.01□□□□□ -1.61
PTPRK-209ENST00000415046 TRIM17Q9Y577 477 aa5.01□□□□□ -1.61
PTPRK-209ENST00000415046 PCDHA1Q9Y5I3 950 aa5.01□□□□□ -1.61
PTPRK-209ENST00000415046 TRIP12Q14669 1992 aaPredicted RBP5.01□□□□□ -1.61
PTPRK-209ENST00000415046 LOXHD1Q8IVV2 1947 aa5□□□□□ -1.61
PTPRK-209ENST00000415046 ERICH2A1L162 156 aa5□□□□□ -1.61
PTPRK-209ENST00000415046 MYO1FO00160 1098 aa5□□□□□ -1.61
PTPRK-209ENST00000415046 QSOX1O00391 747 aa5□□□□□ -1.61
PTPRK-209ENST00000415046 TNPO2O14787 897 aaKnown RBP5□□□□□ -1.61
PTPRK-209ENST00000415046 DHX16O60231 1041 aaKnown RBP5□□□□□ -1.61
PTPRK-209ENST00000415046 PARNO95453 639 aaKnown RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms