RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 DNPEPQ9ULA0 475 aa17.65■□□□□ 0.42
PHRF1-202ENST00000413872 F8VP50 259 aa17.64■□□□□ 0.41
PHRF1-202ENST00000413872 MTA2O94776 668 aa17.64■□□□□ 0.41
PHRF1-202ENST00000413872 AIF1P55008 147 aa17.64■□□□□ 0.41
PHRF1-202ENST00000413872 MARSP56192 900 aaKnown RBP17.64■□□□□ 0.41
PHRF1-202ENST00000413872 FUT2Q10981 343 aa17.64■□□□□ 0.41
PHRF1-202ENST00000413872 MTSS1LQ765P7 747 aa17.64■□□□□ 0.41
PHRF1-202ENST00000413872 LRRC34Q8IZ02 419 aa17.64■□□□□ 0.41
PHRF1-202ENST00000413872 MAGEC3Q8TD91 643 aa17.64■□□□□ 0.41
PHRF1-202ENST00000413872 IL22Q9GZX6 179 aa17.64■□□□□ 0.41
PHRF1-202ENST00000413872 HIPK3Q9H422 1215 aa17.64■□□□□ 0.41
PHRF1-202ENST00000413872 NFAT5O94916 1531 aa17.64■□□□□ 0.41
PHRF1-202ENST00000413872 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.64■□□□□ 0.41
PHRF1-202ENST00000413872 GNG14A0A1W2PPG7 69 aa17.64■□□□□ 0.41
PHRF1-202ENST00000413872 GLI1P08151 1106 aa17.64■□□□□ 0.41
PHRF1-202ENST00000413872 SELPP16109 830 aa17.64■□□□□ 0.41
PHRF1-202ENST00000413872 GALNTL6Q49A17 601 aa17.64■□□□□ 0.41
PHRF1-202ENST00000413872 MFSD4BQ5TF39 518 aa17.64■□□□□ 0.41
PHRF1-202ENST00000413872 ZNF470Q6ECI4 717 aa17.64■□□□□ 0.41
PHRF1-202ENST00000413872 MDM1Q8TC05 714 aa17.64■□□□□ 0.41
PHRF1-202ENST00000413872 TSC22D3Q99576 134 aa17.64■□□□□ 0.41
PHRF1-202ENST00000413872 ZNF510Q9Y2H8 683 aa17.64■□□□□ 0.41
PHRF1-202ENST00000413872 MYOM1P52179 1685 aa17.64■□□□□ 0.41
PHRF1-202ENST00000413872 A0A0A0MRY4 1105 aa17.64■□□□□ 0.41
PHRF1-202ENST00000413872 DGKIO75912 1065 aa17.64■□□□□ 0.41
PHRF1-202ENST00000413872 PDHA1P08559 390 aa17.64■□□□□ 0.41
PHRF1-202ENST00000413872 ARF4P18085 180 aaPredicted RBP17.64■□□□□ 0.41
PHRF1-202ENST00000413872 PSMA4P25789 261 aaKnown RBP17.64■□□□□ 0.41
PHRF1-202ENST00000413872 DAB2IPQ5VWQ8 1189 aa17.64■□□□□ 0.41
PHRF1-202ENST00000413872 ANKS6Q68DC2 871 aa17.64■□□□□ 0.41
PHRF1-202ENST00000413872 SPATA13Q96N96 652 aa17.64■□□□□ 0.41
PHRF1-202ENST00000413872 DNAJC16Q9Y2G8 782 aa17.64■□□□□ 0.41
PHRF1-202ENST00000413872 STARD13Q9Y3M8 1113 aa17.64■□□□□ 0.41
PHRF1-202ENST00000413872 BTNL10A8MVZ5 291 aa17.64■□□□□ 0.41
PHRF1-202ENST00000413872 PECAM1P16284 738 aaPredicted RBP17.64■□□□□ 0.41
PHRF1-202ENST00000413872 IGFBP4P22692 258 aa17.64■□□□□ 0.41
PHRF1-202ENST00000413872 CDK7P50613 346 aa17.64■□□□□ 0.41
PHRF1-202ENST00000413872 SPDYCQ5MJ68 293 aa17.64■□□□□ 0.41
PHRF1-202ENST00000413872 FAM183BPQ6ZVS7 135 aa17.64■□□□□ 0.41
PHRF1-202ENST00000413872 FBXO39Q8N4B4 442 aa17.64■□□□□ 0.41
PHRF1-202ENST00000413872 EIF1ADQ8N9N8 165 aaKnown RBP17.64■□□□□ 0.41
PHRF1-202ENST00000413872 FAM124BQ9H5Z6 455 aaPredicted RBP17.64■□□□□ 0.41
PHRF1-202ENST00000413872 HEY2Q9UBP5 337 aa17.64■□□□□ 0.41
PHRF1-202ENST00000413872 L1RE1Q9UN81 338 aa17.64■□□□□ 0.41
PHRF1-202ENST00000413872 CHI3L1P36222 383 aaPredicted RBP17.63■□□□□ 0.41
PHRF1-202ENST00000413872 SEC24CP53992 1094 aa17.63■□□□□ 0.41
PHRF1-202ENST00000413872 CYLC2Q14093 348 aaPredicted RBP17.63■□□□□ 0.41
PHRF1-202ENST00000413872 SETMARQ53H47 684 aaPredicted RBP17.63■□□□□ 0.41
PHRF1-202ENST00000413872 ZC3H12AQ5D1E8 599 aaKnown RBP17.63■□□□□ 0.41
PHRF1-202ENST00000413872 POLNQ7Z5Q5 900 aa17.63■□□□□ 0.41
PHRF1-202ENST00000413872 VTI1BQ9UEU0 232 aa17.63■□□□□ 0.41
PHRF1-202ENST00000413872 WDR27A2RRH5 827 aa17.63■□□□□ 0.41
PHRF1-202ENST00000413872 RIPK2O43353 540 aa17.63■□□□□ 0.41
PHRF1-202ENST00000413872 B4GALT4O60513 344 aa17.63■□□□□ 0.41
PHRF1-202ENST00000413872 VAPBO95292 243 aa17.63■□□□□ 0.41
PHRF1-202ENST00000413872 TPH1P17752 444 aa17.63■□□□□ 0.41
PHRF1-202ENST00000413872 CDC25CP30307 473 aa17.63■□□□□ 0.41
PHRF1-202ENST00000413872 TRIP10Q15642 601 aa17.63■□□□□ 0.41
PHRF1-202ENST00000413872 EEF1DP3Q658K8 133 aa17.63■□□□□ 0.41
PHRF1-202ENST00000413872 PSTKQ8IV42 348 aaKnown RBP17.63■□□□□ 0.41
PHRF1-202ENST00000413872 SYTL1Q8IYJ3 562 aa17.63■□□□□ 0.41
PHRF1-202ENST00000413872 DNAJC18Q9H819 358 aa17.63■□□□□ 0.41
PHRF1-202ENST00000413872 SCN3BQ9NY72 215 aa17.63■□□□□ 0.41
PHRF1-202ENST00000413872 C1QTNF3-AMACRE9PGA6 284 aa17.63■□□□□ 0.41
PHRF1-202ENST00000413872 XPO1O14980 1071 aaKnown RBP17.63■□□□□ 0.41
PHRF1-202ENST00000413872 CCND1P24385 295 aa17.63■□□□□ 0.41
PHRF1-202ENST00000413872 TNFSF9P41273 254 aa17.63■□□□□ 0.41
PHRF1-202ENST00000413872 UGCGQ16739 394 aa17.63■□□□□ 0.41
PHRF1-202ENST00000413872 DTX3LQ8TDB6 740 aa17.63■□□□□ 0.41
PHRF1-202ENST00000413872 KAT5Q92993 513 aa17.63■□□□□ 0.41
PHRF1-202ENST00000413872 SERAC1Q96JX3 654 aa17.63■□□□□ 0.41
PHRF1-202ENST00000413872 CNDP1Q96KN2 507 aa17.63■□□□□ 0.41
PHRF1-202ENST00000413872 ZNF670Q9BS34 389 aa17.63■□□□□ 0.41
PHRF1-202ENST00000413872 NIFKQ9BYG3 293 aaKnown RBP17.63■□□□□ 0.41
PHRF1-202ENST00000413872 MAN1C1Q9NR34 630 aa17.63■□□□□ 0.41
PHRF1-202ENST00000413872 FAM50BQ9Y247 325 aa17.63■□□□□ 0.41
PHRF1-202ENST00000413872 CHADO15335 359 aa17.63■□□□□ 0.41
PHRF1-202ENST00000413872 GNRH1P01148 92 aa17.63■□□□□ 0.41
PHRF1-202ENST00000413872 CES1P23141 567 aa17.63■□□□□ 0.41
PHRF1-202ENST00000413872 HSPA13P48723 471 aa17.63■□□□□ 0.41
PHRF1-202ENST00000413872 ZBTB17Q13105 803 aa17.63■□□□□ 0.41
PHRF1-202ENST00000413872 DPYSL3Q14195 570 aa17.63■□□□□ 0.41
PHRF1-202ENST00000413872 CEP41Q9BYV8 373 aa17.63■□□□□ 0.41
PHRF1-202ENST00000413872 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.63■□□□□ 0.41
PHRF1-202ENST00000413872 COL14A1Q05707 1796 aaKnown RBP17.62■□□□□ 0.41
PHRF1-202ENST00000413872 DAB1O75553 588 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 ASGR1P07306 291 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 PCNAP12004 261 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 HLA-DPA1P20036 260 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 RBL1P28749 1068 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 CYP51A1Q16850 503 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 SLC24A5Q71RS6 500 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 P3H2Q8IVL5 708 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 PPP1R10Q96QC0 940 aaKnown RBP17.62■□□□□ 0.41
PHRF1-202ENST00000413872 OSBPL1AQ9BXW6 950 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 EVA1BQ9NVM1 165 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 PLIN4Q96Q06 1357 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 SERPINE1P05121 402 aa17.62■□□□□ 0.41
PHRF1-202ENST00000413872 TCN1P20061 433 aaPredicted RBP17.62■□□□□ 0.41
PHRF1-202ENST00000413872 ATP6AP1LQ52LC2 224 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms