RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 STARD3Q14849 445 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 GPR158Q5T848 1215 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 TTC19Q6DKK2 380 aaPredicted RBP8.75□□□□□ -1.01
SYNE1-211ENST00000413186 BBS12Q6ZW61 710 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 AHI1Q8N157 1196 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 JOSD2Q8TAC2 188 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 PHOSPHO2Q8TCD6 241 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 HTR3CQ8WXA8 447 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 ATG4AQ8WYN0 398 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 RNF157Q96PX1 679 aa8.75□□□□□ -1.01
SYNE1-211ENST00000413186 ARIH1Q9Y4X5 557 aaPredicted RBP8.75□□□□□ -1.01
SYNE1-211ENST00000413186 RPL17P18621 184 aaKnown RBP8.74□□□□□ -1.01
SYNE1-211ENST00000413186 ITGA8P53708 1063 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 MORF4L2Q15014 288 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 PCSK7Q16549 785 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 RAP1GAP2Q684P5 730 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 TMEM110Q86TL2 294 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 ZNF280BQ86YH2 543 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 DQX1Q8TE96 717 aaKnown RBP8.74□□□□□ -1.01
SYNE1-211ENST00000413186 PPP1R14BQ96C90 147 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 HES6Q96HZ4 224 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 MPP4Q96JB8 637 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 SPATA17Q96L03 361 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 ADGRE3Q9BY15 652 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 GPR63Q9BZJ6 419 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 MAFFQ9ULX9 164 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 NAALADL1Q9UQQ1 740 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 VPS9D1Q9Y2B5 631 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 COPG1Q9Y678 874 aaKnown RBP8.74□□□□□ -1.01
SYNE1-211ENST00000413186 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.74□□□□□ -1.01
SYNE1-211ENST00000413186 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.74□□□□□ -1.01
SYNE1-211ENST00000413186 CFAP99D6REC4 459 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 PMPCBO75439 489 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 ATP5HO75947 161 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 SPATA31D3P0C874 917 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 PBX3P40426 434 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 ANKRD20A8PQ5CZ79 823 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 CLEC20AQ6ZU45 233 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 SPATA31D4Q6ZUB0 917 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 DSG4Q86SJ6 1040 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 FUKQ8N0W3 1084 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 TTC8Q8TAM2 541 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 ZBTB9Q96C00 473 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 MCRS1Q96EZ8 462 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 DCUN1D1Q96GG9 259 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 SCUBE2Q9NQ36 999 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 C6orf203Q9P0P8 240 aaPredicted RBP8.74□□□□□ -1.01
SYNE1-211ENST00000413186 UBA2Q9UBT2 640 aaPredicted RBP8.74□□□□□ -1.01
SYNE1-211ENST00000413186 PTGESO14684 152 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 FLT3P36888 993 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 MAPK8P45983 427 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 SLCO1A2P46721 670 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 INAQ16352 499 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 RASIP1Q5U651 963 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 ANKRD33Q7Z3H0 272 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 LINC01465Q8N7H1 131 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 COLGALT1Q8NBJ5 622 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 GPR152Q8TDT2 470 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 KCNN1Q92952 543 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 MYCBPQ99417 103 aaPredicted RBP8.74□□□□□ -1.01
SYNE1-211ENST00000413186 PKP3Q9Y446 797 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 YIPF1Q9Y548 306 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 ANGPTL3Q9Y5C1 460 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.74□□□□□ -1.01
SYNE1-211ENST00000413186 CAPN7Q9Y6W3 813 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 PAPSS1O43252 624 aaPredicted RBP8.74□□□□□ -1.01
SYNE1-211ENST00000413186 SYNCRIPO60506 623 aaKnown RBP8.74□□□□□ -1.01
SYNE1-211ENST00000413186 TNFRSF8P28908 595 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 SERPINB9P50453 376 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 IRX4P78413 519 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 PPP1R15BQ5SWA1 713 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 TAS2R42Q7RTR8 314 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 DENND1CQ8IV53 801 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 LMO3Q8TAP4 145 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 CELF6Q96J87 481 aaKnown RBP8.74□□□□□ -1.01
SYNE1-211ENST00000413186 PAK6Q9NQU5 681 aaPredicted RBP8.74□□□□□ -1.01
SYNE1-211ENST00000413186 TBK1Q9UHD2 729 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 REXO2Q9Y3B8 237 aaKnown RBP8.74□□□□□ -1.01
SYNE1-211ENST00000413186 BACE2Q9Y5Z0 518 aa8.74□□□□□ -1.01
SYNE1-211ENST00000413186 RCCD1A6NED2 376 aa8.73□□□□□ -1.01
SYNE1-211ENST00000413186 C2orf81A6NN90 581 aa8.73□□□□□ -1.01
SYNE1-211ENST00000413186 ERI2A8K979 691 aaKnown RBP8.73□□□□□ -1.01
SYNE1-211ENST00000413186 STX7O15400 261 aaKnown RBP8.73□□□□□ -1.01
SYNE1-211ENST00000413186 CDH16O75309 829 aa8.73□□□□□ -1.01
SYNE1-211ENST00000413186 IGSF6O95976 241 aa8.73□□□□□ -1.01
SYNE1-211ENST00000413186 RALBP11234 206 aa8.73□□□□□ -1.01
SYNE1-211ENST00000413186 POLR2EP19388 210 aaKnown RBP8.73□□□□□ -1.01
SYNE1-211ENST00000413186 TAC1P20366 129 aa8.73□□□□□ -1.01
SYNE1-211ENST00000413186 UBE3AQ05086 875 aa8.73□□□□□ -1.01
SYNE1-211ENST00000413186 PTP4A2Q12974 167 aa8.73□□□□□ -1.01
SYNE1-211ENST00000413186 ATG16L1Q676U5 607 aa8.73□□□□□ -1.01
SYNE1-211ENST00000413186 TTC23LQ6PF05 361 aa8.73□□□□□ -1.01
SYNE1-211ENST00000413186 RFX8Q6ZV50 586 aa8.73□□□□□ -1.01
SYNE1-211ENST00000413186 CASP10Q92851 521 aa8.73□□□□□ -1.01
SYNE1-211ENST00000413186 ALKBH8Q96BT7 664 aaKnown RBP8.73□□□□□ -1.01
SYNE1-211ENST00000413186 ARMC5Q96C12 935 aa8.73□□□□□ -1.01
SYNE1-211ENST00000413186 STAMBPL1Q96FJ0 436 aa8.73□□□□□ -1.01
SYNE1-211ENST00000413186 FCRL2Q96LA5 508 aaPredicted RBP8.73□□□□□ -1.01
SYNE1-211ENST00000413186 TWNKQ96RR1 684 aa8.73□□□□□ -1.01
SYNE1-211ENST00000413186 TMEM121Q9BTD3 319 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms