RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 TMPRSS11EQ9UL52 423 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 FLVCR2Q9UPI3 526 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 NCAPD3P42695 1498 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 EML1O00423 815 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 CCNT1O60563 726 aaKnown RBP4.68□□□□□ -1.66
PTPN13-202ENST00000411767 MOCS2O96007 188 aaPredicted RBP4.68□□□□□ -1.66
PTPN13-202ENST00000411767 IFNAR1P17181 557 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 JUNDP17535 347 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 PPP4CP60510 307 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 BAMBIQ13145 260 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 AIMP2Q13155 320 aaKnown RBP4.68□□□□□ -1.66
PTPN13-202ENST00000411767 ORC1Q13415 861 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 TTLL9Q3SXZ7 439 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 MLIPQ5VWP3 458 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 RWDD4Q6NW29 188 aaKnown RBP4.68□□□□□ -1.66
PTPN13-202ENST00000411767 SERPINA13PQ6UXR4 307 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 ZNF605Q86T29 641 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 ZNF554Q86TJ5 538 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 KBTBD2Q8IY47 623 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 PANK1Q8TE04 598 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 AFG1LQ8WV93 481 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 MKL1Q969V6 931 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 UBXN10Q96LJ8 280 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 HINFPQ9BQA5 517 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 OPA3Q9H6K4 179 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 PANK3Q9H999 370 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 ZNF408Q9H9D4 720 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 MAGEF1Q9HAY2 307 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 CYP4F11Q9HBI6 524 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 PRDM11Q9NQV5 511 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 FAM118AQ9NWS6 357 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 GPRC5BQ9NZH0 403 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.68□□□□□ -1.66
PTPN13-202ENST00000411767 ZNF69Q9UC07 566 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 SNX12Q9UMY4 172 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 MROH5Q6ZUA9 1318 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 C13orf42A0A1B0GVH6 325 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 DENND3A2RUS2 1198 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 A8MXE2 369 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 KHNYNO15037 678 aaKnown RBP4.68□□□□□ -1.66
PTPN13-202ENST00000411767 CYB5BO43169 146 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 BNIP3LO60238 219 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 DNAJA2O60884 412 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 ZNF821O75541 412 aaPredicted RBP4.68□□□□□ -1.66
PTPN13-202ENST00000411767 GNAT1P11488 350 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 SERPINF1P36955 418 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 GCLMP48507 274 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 ZNF45Q02386 682 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 TLE4Q04727 773 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 DSG2Q14126 1118 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 FASTKQ14296 549 aaKnown RBP4.68□□□□□ -1.66
PTPN13-202ENST00000411767 KIAA0319Q5VV43 1072 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 IQSEC1Q6DN90 963 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 UNC13DQ70J99 1090 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 OR13C9Q8NGT0 318 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 OR2L8Q8NGY9 312 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 TEX47Q8TBZ9 253 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 URGCPQ8TCY9 931 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 SSH3Q8TE77 659 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 PROX1Q92786 737 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 FAM149B1Q96BN6 582 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 DYNLL2Q96FJ2 89 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 XAGE2Q96GT9 111 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 UGT2B28Q9BY64 529 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 ZNF436Q9C0F3 470 aaPredicted RBP4.68□□□□□ -1.66
PTPN13-202ENST00000411767 GPAMQ9HCL2 828 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 FEM1BQ9UK73 627 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 CDH9Q9ULB4 789 aa4.68□□□□□ -1.66
PTPN13-202ENST00000411767 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.67□□□□□ -1.66
PTPN13-202ENST00000411767 PIGNO95427 931 aa4.67□□□□□ -1.66
PTPN13-202ENST00000411767 FTCDO95954 541 aa4.67□□□□□ -1.66
PTPN13-202ENST00000411767 DGKAP23743 735 aa4.67□□□□□ -1.66
PTPN13-202ENST00000411767 FMO5P49326 533 aa4.67□□□□□ -1.66
PTPN13-202ENST00000411767 CLCN5P51795 746 aa4.67□□□□□ -1.66
PTPN13-202ENST00000411767 LUMP51884 338 aaPredicted RBP4.67□□□□□ -1.66
PTPN13-202ENST00000411767 S100A10P60903 97 aa4.67□□□□□ -1.66
PTPN13-202ENST00000411767 USP46P62068 366 aa4.67□□□□□ -1.66
PTPN13-202ENST00000411767 ST3GAL4Q11206 333 aa4.67□□□□□ -1.66
PTPN13-202ENST00000411767 ZNF235Q14590 738 aa4.67□□□□□ -1.66
PTPN13-202ENST00000411767 ZNF613Q6PF04 617 aa4.67□□□□□ -1.66
PTPN13-202ENST00000411767 CRELD2Q6UXH1 353 aaPredicted RBP4.67□□□□□ -1.66
PTPN13-202ENST00000411767 DNAJC14Q6Y2X3 702 aaPredicted RBP4.67□□□□□ -1.66
PTPN13-202ENST00000411767 LCORLQ8N3X6 602 aa4.67□□□□□ -1.66
PTPN13-202ENST00000411767 NPLOC4Q8TAT6 608 aa4.67□□□□□ -1.66
PTPN13-202ENST00000411767 C15orf40Q8WUR7 153 aa4.67□□□□□ -1.66
PTPN13-202ENST00000411767 MITD1Q8WV92 249 aa4.67□□□□□ -1.66
PTPN13-202ENST00000411767 TRAPPC9Q96Q05 1148 aa4.67□□□□□ -1.66
PTPN13-202ENST00000411767 SLC38A2Q96QD8 506 aa4.67□□□□□ -1.66
PTPN13-202ENST00000411767 CCDC3Q9BQI4 270 aa4.67□□□□□ -1.66
PTPN13-202ENST00000411767 MRPL9Q9BYD2 267 aaKnown RBP4.67□□□□□ -1.66
PTPN13-202ENST00000411767 MLXIPQ9HAP2 919 aa4.67□□□□□ -1.66
PTPN13-202ENST00000411767 FAM105AQ9NUU6 356 aa4.67□□□□□ -1.66
PTPN13-202ENST00000411767 CFAP97Q9P2B7 532 aa4.67□□□□□ -1.66
PTPN13-202ENST00000411767 PCDHGA9Q9Y5G4 932 aaKnown RBP4.67□□□□□ -1.66
PTPN13-202ENST00000411767 PDS5BQ9NTI5 1447 aa4.67□□□□□ -1.66
PTPN13-202ENST00000411767 TDRD9Q8NDG6 1382 aaKnown RBP4.67□□□□□ -1.66
PTPN13-202ENST00000411767 RASA4BC9J798 803 aa4.67□□□□□ -1.66
PTPN13-202ENST00000411767 RASA4O43374 803 aa4.67□□□□□ -1.66
PTPN13-202ENST00000411767 OR1I1O60431 355 aa4.67□□□□□ -1.66
PTPN13-202ENST00000411767 HMGCRP04035 888 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms