RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 CDV3Q9UKY7 258 aaKnown RBP19.72■□□□□ 0.75
SF3A1-202ENST00000411423 SNX10Q9Y5X0 201 aa19.72■□□□□ 0.75
SF3A1-202ENST00000411423 HS3ST4Q9Y661 456 aa19.72■□□□□ 0.75
SF3A1-202ENST00000411423 DCDC2BA2VCK2 349 aa19.71■□□□□ 0.75
SF3A1-202ENST00000411423 GOLGA8SH3BPF8 625 aa19.71■□□□□ 0.75
SF3A1-202ENST00000411423 MAP3K13O43283 966 aa19.71■□□□□ 0.75
SF3A1-202ENST00000411423 ADCY5O95622 1261 aa19.71■□□□□ 0.75
SF3A1-202ENST00000411423 LSM8O95777 96 aaKnown RBP19.71■□□□□ 0.75
SF3A1-202ENST00000411423 TPM2P07951 284 aa19.71■□□□□ 0.75
SF3A1-202ENST00000411423 CDK11BP21127 795 aaKnown RBP19.71■□□□□ 0.75
SF3A1-202ENST00000411423 ITPKAP23677 461 aa19.71■□□□□ 0.75
SF3A1-202ENST00000411423 CCR1P32246 355 aa19.71■□□□□ 0.75
SF3A1-202ENST00000411423 CSKP41240 450 aa19.71■□□□□ 0.75
SF3A1-202ENST00000411423 STARD3Q14849 445 aa19.71■□□□□ 0.75
SF3A1-202ENST00000411423 AASDHQ4L235 1098 aaPredicted RBP19.71■□□□□ 0.75
SF3A1-202ENST00000411423 FNDC3BQ53EP0 1204 aaKnown RBP19.71■□□□□ 0.75
SF3A1-202ENST00000411423 FAM102AQ5T9C2 384 aaPredicted RBP19.71■□□□□ 0.75
SF3A1-202ENST00000411423 FBXL22Q6P050 247 aa19.71■□□□□ 0.75
SF3A1-202ENST00000411423 DGLUCYQ7Z3D6 616 aa19.71■□□□□ 0.75
SF3A1-202ENST00000411423 PHLDB2Q86SQ0 1253 aa19.71■□□□□ 0.75
SF3A1-202ENST00000411423 TMPRSS6Q8IU80 811 aa19.71■□□□□ 0.75
SF3A1-202ENST00000411423 ZDHHC17Q8IUH5 632 aa19.71■□□□□ 0.75
SF3A1-202ENST00000411423 OR52K2Q8NGK3 314 aa19.71■□□□□ 0.75
SF3A1-202ENST00000411423 NETO1Q8TDF5 533 aa19.71■□□□□ 0.75
SF3A1-202ENST00000411423 PIGKQ92643 395 aa19.71■□□□□ 0.75
SF3A1-202ENST00000411423 TBCBQ99426 244 aa19.71■□□□□ 0.75
SF3A1-202ENST00000411423 BPIFA3Q9BQP9 254 aa19.71■□□□□ 0.75
SF3A1-202ENST00000411423 PRDM16Q9HAZ2 1276 aa19.71■□□□□ 0.75
SF3A1-202ENST00000411423 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.71■□□□□ 0.75
SF3A1-202ENST00000411423 CEP192Q8TEP8 1941 aa19.7■□□□□ 0.74
SF3A1-202ENST00000411423 MED19A0JLT2 244 aaPredicted RBP19.7■□□□□ 0.74
SF3A1-202ENST00000411423 SLC30A4O14863 429 aa19.7■□□□□ 0.74
SF3A1-202ENST00000411423 GJB6O95452 261 aa19.7■□□□□ 0.74
SF3A1-202ENST00000411423 DLDP09622 509 aaKnown RBP19.7■□□□□ 0.74
SF3A1-202ENST00000411423 STAT1P42224 750 aa19.7■□□□□ 0.74
SF3A1-202ENST00000411423 SULT1E1P49888 294 aa19.7■□□□□ 0.74
SF3A1-202ENST00000411423 RPL6Q02878 288 aaKnown RBP19.7■□□□□ 0.74
SF3A1-202ENST00000411423 PTP4A2Q12974 167 aa19.7■□□□□ 0.74
SF3A1-202ENST00000411423 CAMK2GQ13555 558 aaPredicted RBP19.7■□□□□ 0.74
SF3A1-202ENST00000411423 AUHQ13825 339 aaKnown RBP19.7■□□□□ 0.74
SF3A1-202ENST00000411423 PITRM1Q5JRX3 1037 aa19.7■□□□□ 0.74
SF3A1-202ENST00000411423 BNIPLQ7Z465 357 aa19.7■□□□□ 0.74
SF3A1-202ENST00000411423 ZNF677Q86XU0 584 aa19.7■□□□□ 0.74
SF3A1-202ENST00000411423 C12orf50Q8NA57 414 aaPredicted RBP19.7■□□□□ 0.74
SF3A1-202ENST00000411423 NEK11Q8NG66 645 aa19.7■□□□□ 0.74
SF3A1-202ENST00000411423 SLC30A5Q8TAD4 765 aa19.7■□□□□ 0.74
SF3A1-202ENST00000411423 RNF34Q969K3 372 aa19.7■□□□□ 0.74
SF3A1-202ENST00000411423 PCMTD1Q96MG8 357 aaPredicted RBP19.7■□□□□ 0.74
SF3A1-202ENST00000411423 SPAG5Q96R06 1193 aa19.7■□□□□ 0.74
SF3A1-202ENST00000411423 LNP1A1A4G5 178 aa19.69■□□□□ 0.74
SF3A1-202ENST00000411423 F5H5T6 163 aa19.69■□□□□ 0.74
SF3A1-202ENST00000411423 SYNCRIPO60506 623 aaKnown RBP19.69■□□□□ 0.74
SF3A1-202ENST00000411423 ZNF217O75362 1048 aa19.69■□□□□ 0.74
SF3A1-202ENST00000411423 PAGE1O75459 146 aa19.69■□□□□ 0.74
SF3A1-202ENST00000411423 UNGP13051 313 aaPredicted RBP19.69■□□□□ 0.74
SF3A1-202ENST00000411423 POLR2EP19388 210 aaKnown RBP19.69■□□□□ 0.74
SF3A1-202ENST00000411423 ABCB4P21439 1286 aa19.69■□□□□ 0.74
SF3A1-202ENST00000411423 MZF1P28698 734 aaPredicted RBP19.69■□□□□ 0.74
SF3A1-202ENST00000411423 SCNN1AP37088 669 aa19.69■□□□□ 0.74
SF3A1-202ENST00000411423 CXCR3P49682 368 aa19.69■□□□□ 0.74
SF3A1-202ENST00000411423 ARID5AQ03989 594 aa19.69■□□□□ 0.74
SF3A1-202ENST00000411423 CDH18Q13634 790 aa19.69■□□□□ 0.74
SF3A1-202ENST00000411423 BYSLQ13895 437 aaKnown RBP19.69■□□□□ 0.74
SF3A1-202ENST00000411423 IQCB1Q15051 598 aa19.69■□□□□ 0.74
SF3A1-202ENST00000411423 CXorf57Q6NSI4 855 aaKnown RBP19.69■□□□□ 0.74
SF3A1-202ENST00000411423 METTL3Q86U44 580 aaKnown RBP19.69■□□□□ 0.74
SF3A1-202ENST00000411423 ZNF683Q8IZ20 524 aa19.69■□□□□ 0.74
SF3A1-202ENST00000411423 CCAR2Q8N163 923 aaKnown RBP19.69■□□□□ 0.74
SF3A1-202ENST00000411423 EMC1Q8N766 993 aa19.69■□□□□ 0.74
SF3A1-202ENST00000411423 OR2T3Q8NH03 318 aa19.69■□□□□ 0.74
SF3A1-202ENST00000411423 PGAP3Q96FM1 320 aaPredicted RBP19.69■□□□□ 0.74
SF3A1-202ENST00000411423 CFAP57Q96MR6 1250 aa19.69■□□□□ 0.74
SF3A1-202ENST00000411423 RTKNQ9BST9 563 aa19.69■□□□□ 0.74
SF3A1-202ENST00000411423 PRSS16Q9NQE7 514 aa19.69■□□□□ 0.74
SF3A1-202ENST00000411423 FSCN3Q9NQT6 498 aa19.69■□□□□ 0.74
SF3A1-202ENST00000411423 ITM2CQ9NQX7 267 aa19.69■□□□□ 0.74
SF3A1-202ENST00000411423 METTL5Q9NRN9 209 aaKnown RBP19.69■□□□□ 0.74
SF3A1-202ENST00000411423 ARHGEF38Q9NXL2 777 aa19.69■□□□□ 0.74
SF3A1-202ENST00000411423 PILRBQ9UKJ0 227 aa19.69■□□□□ 0.74
SF3A1-202ENST00000411423 VANGL2Q9ULK5 521 aa19.69■□□□□ 0.74
SF3A1-202ENST00000411423 H0Y626 953 aa19.68■□□□□ 0.74
SF3A1-202ENST00000411423 TM4SF5O14894 197 aa19.68■□□□□ 0.74
SF3A1-202ENST00000411423 C7P10643 843 aa19.68■□□□□ 0.74
SF3A1-202ENST00000411423 MMP8P22894 467 aa19.68■□□□□ 0.74
SF3A1-202ENST00000411423 TPMTP51580 245 aa19.68■□□□□ 0.74
SF3A1-202ENST00000411423 SNX16P57768 344 aa19.68■□□□□ 0.74
SF3A1-202ENST00000411423 IRX4P78413 519 aa19.68■□□□□ 0.74
SF3A1-202ENST00000411423 ZNF33AQ06730 810 aa19.68■□□□□ 0.74
SF3A1-202ENST00000411423 PEAR1Q5VY43 1037 aaPredicted RBP19.68■□□□□ 0.74
SF3A1-202ENST00000411423 LYSMD4Q5XG99 296 aa19.68■□□□□ 0.74
SF3A1-202ENST00000411423 SLC36A4Q6YBV0 504 aa19.68■□□□□ 0.74
SF3A1-202ENST00000411423 ERMP1Q7Z2K6 904 aa19.68■□□□□ 0.74
SF3A1-202ENST00000411423 ANKRD20A12PQ8NF67 263 aa19.68■□□□□ 0.74
SF3A1-202ENST00000411423 ALG14Q96F25 216 aa19.68■□□□□ 0.74
SF3A1-202ENST00000411423 SIPA1Q96FS4 1042 aa19.68■□□□□ 0.74
SF3A1-202ENST00000411423 TKTL2Q9H0I9 626 aa19.68■□□□□ 0.74
SF3A1-202ENST00000411423 RTN4Q9NQC3 1192 aaKnown RBP19.68■□□□□ 0.74
SF3A1-202ENST00000411423 WSB2Q9NYS7 404 aaPredicted RBP19.68■□□□□ 0.74
SF3A1-202ENST00000411423 PLA2G4CQ9UP65 541 aa19.68■□□□□ 0.74
SF3A1-202ENST00000411423 DAAM1Q9Y4D1 1078 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms