RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 CDC42BPGQ6DT37 1551 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 NUP155O75694 1391 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 METP08581 1390 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 MBD3L5A6NJ08 208 aaPredicted RBP2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 AQP12BA6NM10 295 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 GUCY1B2O75343 617 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 USP1O94782 785 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 IGLV2-14P01704 120 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 FGAP02671 866 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 IFIT1P09914 478 aaKnown RBP2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 ELFN1P0C7U0 828 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 EBLN1P0CF75 366 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 HGFP14210 728 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 CREB1P16220 341 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 CD53P19397 219 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 DRD1P21728 446 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 GATA3P23771 443 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 ADORA2AP29274 412 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 KRT9P35527 623 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 OAZ1P54368 228 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 EEFSECP57772 596 aaKnown RBP2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 TLE2Q04725 743 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 SRSF4Q08170 494 aaKnown RBP2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 CCDC15Q0P6D6 951 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 TRPC3Q13507 836 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 BFSP2Q13515 415 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 BOP1Q14137 746 aaKnown RBP2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 ACOX1Q15067 660 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 TIGD6Q17RP2 521 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 ZIK1Q3SY52 487 aaPredicted RBP2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 TRIM60Q495X7 471 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 TREML2Q5T2D2 321 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 TMTC4Q5T4D3 741 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 VPS53Q5VIR6 699 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 SLC9A4Q6AI14 798 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 SULT6B1Q6IMI4 303 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 ZNF425Q6IV72 752 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 CCDC144NLQ6NUI1 221 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 WDR93Q6P2C0 686 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 CEP85Q6P2H3 762 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 GPR149Q86SP6 731 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 ANKRD44Q8N8A2 993 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 FAM71DQ8N9W8 422 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 FSIP1Q8NA03 581 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 SUN3Q8TAQ9 357 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 OTUD7AQ8TE49 926 aaPredicted RBP2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 STYXQ8WUJ0 223 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 DAZAP1Q96EP5 407 aaKnown RBP2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 Q96MF0 132 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 WDR24Q96S15 920 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 PIGSQ96S52 555 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 GDF15Q99988 308 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 PAAF1Q9BRP4 392 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 LDHAL6BQ9BYZ2 381 aaPredicted RBP2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 TRIM2Q9C040 744 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 ZNF768Q9H5H4 540 aaKnown RBP2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 SYBUQ9NX95 663 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 PI4KBQ9UBF8 816 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 MGAT4CQ9UBM8 478 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 VPS51Q9UID3 782 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 RIMKLBQ9ULI2 386 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 SSX2IPQ9Y2D8 614 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 ZBTB1Q9Y2K1 713 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 SLC27A6Q9Y2P4 619 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 RRP7AQ9Y3A4 280 aaKnown RBP2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 TMEM131LA2VDJ0 1609 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 BCL9O00512 1426 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 ANKARQ7Z5J8 1434 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 PTPRUQ92729 1446 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 MAST3O60307 1309 aa2.92□□□□□ -1.94
RNU6-1140P-201ENST00000410517 PXDNQ92626 1479 aa2.91□□□□□ -1.94
RNU6-1140P-201ENST00000410517 TBC1D3DA0A087WVF3 549 aa2.91□□□□□ -1.94
RNU6-1140P-201ENST00000410517 TBC1D3IA0A087WXS9 549 aa2.91□□□□□ -1.94
RNU6-1140P-201ENST00000410517 TBC1D3EA0A087X179 549 aa2.91□□□□□ -1.94
RNU6-1140P-201ENST00000410517 TBC1D3KA0A087X1G2 549 aa2.91□□□□□ -1.94
RNU6-1140P-201ENST00000410517 WDR91A4D1P6 747 aa2.91□□□□□ -1.94
RNU6-1140P-201ENST00000410517 TBC1D3BA6NDS4 549 aa2.91□□□□□ -1.94
RNU6-1140P-201ENST00000410517 TBC1D3FA6NER0 549 aaPredicted RBP2.91□□□□□ -1.94
RNU6-1140P-201ENST00000410517 TBC1D3LB9A6J9 549 aa2.91□□□□□ -1.94
RNU6-1140P-201ENST00000410517 BTBD19C9JJ37 291 aa2.91□□□□□ -1.94
RNU6-1140P-201ENST00000410517 KIF1CO43896 1103 aaKnown RBP2.91□□□□□ -1.94
RNU6-1140P-201ENST00000410517 PMPCBO75439 489 aa2.91□□□□□ -1.94
RNU6-1140P-201ENST00000410517 WDHD1O75717 1129 aaPredicted RBP2.91□□□□□ -1.94
RNU6-1140P-201ENST00000410517 ESRRBO95718 433 aa2.91□□□□□ -1.94
RNU6-1140P-201ENST00000410517 TK1P04183 234 aa2.91□□□□□ -1.94
RNU6-1140P-201ENST00000410517 FESP07332 822 aa2.91□□□□□ -1.94
RNU6-1140P-201ENST00000410517 IL6RP08887 468 aaPredicted RBP2.91□□□□□ -1.94
RNU6-1140P-201ENST00000410517 TBC1D3HP0C7X1 549 aa2.91□□□□□ -1.94
RNU6-1140P-201ENST00000410517 NR2F6P10588 404 aa2.91□□□□□ -1.94
RNU6-1140P-201ENST00000410517 GRK5P34947 590 aa2.91□□□□□ -1.94
RNU6-1140P-201ENST00000410517 ADD2P35612 726 aa2.91□□□□□ -1.94
RNU6-1140P-201ENST00000410517 IGHMBP2P38935 993 aaKnown RBP2.91□□□□□ -1.94
RNU6-1140P-201ENST00000410517 CLCN2P51788 898 aa2.91□□□□□ -1.94
RNU6-1140P-201ENST00000410517 SEC24CP53992 1094 aa2.91□□□□□ -1.94
RNU6-1140P-201ENST00000410517 NAP1L1P55209 391 aaKnown RBP2.91□□□□□ -1.94
RNU6-1140P-201ENST00000410517 FAM189BP81408 668 aa2.91□□□□□ -1.94
RNU6-1140P-201ENST00000410517 TLE3Q04726 772 aa2.91□□□□□ -1.94
RNU6-1140P-201ENST00000410517 UBE3AQ05086 875 aa2.91□□□□□ -1.94
RNU6-1140P-201ENST00000410517 RNASELQ05823 741 aaKnown RBP2.91□□□□□ -1.94
RNU6-1140P-201ENST00000410517 SF3A3Q12874 501 aaKnown RBP eCLIP2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms