RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 XPO1O14980 1071 aaKnown RBP17.11■□□□□ 0.33
LIMS2-208ENST00000410011 DAB1O75553 588 aa17.11■□□□□ 0.33
LIMS2-208ENST00000410011 CD4P01730 458 aa17.11■□□□□ 0.33
LIMS2-208ENST00000410011 LYNP07948 512 aa17.11■□□□□ 0.33
LIMS2-208ENST00000410011 LCP1P13796 627 aa17.11■□□□□ 0.33
LIMS2-208ENST00000410011 ACAT1P24752 427 aaKnown RBP17.11■□□□□ 0.33
LIMS2-208ENST00000410011 GNL1P36915 607 aaPredicted RBP17.11■□□□□ 0.33
LIMS2-208ENST00000410011 PAPOLAP51003 745 aaKnown RBP17.11■□□□□ 0.33
LIMS2-208ENST00000410011 SLC25A3Q00325 362 aa17.11■□□□□ 0.33
LIMS2-208ENST00000410011 CDC16Q13042 620 aa17.11■□□□□ 0.33
LIMS2-208ENST00000410011 ATG14Q6ZNE5 492 aa17.11■□□□□ 0.33
LIMS2-208ENST00000410011 TMEM135Q86UB9 458 aa17.11■□□□□ 0.33
LIMS2-208ENST00000410011 PYROXD2Q8N2H3 581 aa17.11■□□□□ 0.33
LIMS2-208ENST00000410011 GSTCDQ8NEC7 633 aa17.11■□□□□ 0.33
LIMS2-208ENST00000410011 RNF139Q8WU17 664 aa17.11■□□□□ 0.33
LIMS2-208ENST00000410011 STON2Q8WXE9 905 aa17.11■□□□□ 0.33
LIMS2-208ENST00000410011 TTC1Q99614 292 aa17.11■□□□□ 0.33
LIMS2-208ENST00000410011 LRRC40Q9H9A6 602 aa17.11■□□□□ 0.33
LIMS2-208ENST00000410011 PAPOLBQ9NRJ5 636 aaKnown RBP17.11■□□□□ 0.33
LIMS2-208ENST00000410011 SYBUQ9NX95 663 aa17.11■□□□□ 0.33
LIMS2-208ENST00000410011 IL1RAPL1Q9NZN1 696 aa17.11■□□□□ 0.33
LIMS2-208ENST00000410011 TUBGCP4Q9UGJ1 667 aa17.11■□□□□ 0.33
LIMS2-208ENST00000410011 UBQLN1Q9UMX0 589 aaKnown RBP17.11■□□□□ 0.33
LIMS2-208ENST00000410011 MFHAS1Q9Y4C4 1052 aa17.11■□□□□ 0.33
LIMS2-208ENST00000410011 TMEM114B3SHH9 223 aa17.1■□□□□ 0.33
LIMS2-208ENST00000410011 H3BRB1 525 aa17.1■□□□□ 0.33
LIMS2-208ENST00000410011 H2AFYO75367 372 aaKnown RBP17.1■□□□□ 0.33
LIMS2-208ENST00000410011 UPP2O95045 317 aa17.1■□□□□ 0.33
LIMS2-208ENST00000410011 NOS2P35228 1153 aa17.1■□□□□ 0.33
LIMS2-208ENST00000410011 SPRP35270 261 aaPredicted RBP17.1■□□□□ 0.33
LIMS2-208ENST00000410011 NUMBP49757 651 aa17.1■□□□□ 0.33
LIMS2-208ENST00000410011 AIF1P55008 147 aa17.1■□□□□ 0.33
LIMS2-208ENST00000410011 CRADDP78560 199 aa17.1■□□□□ 0.33
LIMS2-208ENST00000410011 C11orf91Q3C1V1 193 aa17.1■□□□□ 0.33
LIMS2-208ENST00000410011 FSCBQ5H9T9 825 aa17.1■□□□□ 0.33
LIMS2-208ENST00000410011 FBXO47Q5MNV8 452 aa17.1■□□□□ 0.33
LIMS2-208ENST00000410011 PDPK2PQ6A1A2 396 aa17.1■□□□□ 0.33
LIMS2-208ENST00000410011 FASTKD5Q7L8L6 764 aaKnown RBP17.1■□□□□ 0.33
LIMS2-208ENST00000410011 DHDDSQ86SQ9 333 aa17.1■□□□□ 0.33
LIMS2-208ENST00000410011 ZNF567Q8N184 647 aa17.1■□□□□ 0.33
LIMS2-208ENST00000410011 SLC9A7Q96T83 725 aa17.1■□□□□ 0.33
LIMS2-208ENST00000410011 RBBP8Q99708 897 aa17.1■□□□□ 0.33
LIMS2-208ENST00000410011 SH3GL3Q99963 347 aa17.1■□□□□ 0.33
LIMS2-208ENST00000410011 LBHD1Q9BQE6 289 aaPredicted RBP17.1■□□□□ 0.33
LIMS2-208ENST00000410011 TUT1Q9H6E5 874 aaKnown RBP17.1■□□□□ 0.33
LIMS2-208ENST00000410011 ELP3Q9H9T3 547 aa17.1■□□□□ 0.33
LIMS2-208ENST00000410011 PNPOQ9NVS9 261 aa17.1■□□□□ 0.33
LIMS2-208ENST00000410011 ENO4A6NNW6 628 aa17.1■□□□□ 0.33
LIMS2-208ENST00000410011 ERI2A8K979 691 aaKnown RBP17.1■□□□□ 0.33
LIMS2-208ENST00000410011 MPOP05164 745 aa17.1■□□□□ 0.33
LIMS2-208ENST00000410011 HOXD8P13378 290 aaPredicted RBP17.1■□□□□ 0.33
LIMS2-208ENST00000410011 PSMB4P28070 264 aa17.1■□□□□ 0.33
LIMS2-208ENST00000410011 ARRB2P32121 409 aa17.1■□□□□ 0.33
LIMS2-208ENST00000410011 PNPLA4P41247 253 aa17.1■□□□□ 0.33
LIMS2-208ENST00000410011 SERPINB8P50452 374 aa17.1■□□□□ 0.33
LIMS2-208ENST00000410011 LIMK2P53671 638 aa17.1■□□□□ 0.33
LIMS2-208ENST00000410011 ROR2Q01974 943 aaKnown RBP17.1■□□□□ 0.33
LIMS2-208ENST00000410011 RNF220Q5VTB9 566 aa17.1■□□□□ 0.33
LIMS2-208ENST00000410011 EPGNQ6UW88 154 aa17.1■□□□□ 0.33
LIMS2-208ENST00000410011 RASSF3Q86WH2 238 aa17.1■□□□□ 0.33
LIMS2-208ENST00000410011 FAM131BQ86XD5 332 aa17.1■□□□□ 0.33
LIMS2-208ENST00000410011 MFN1Q8IWA4 741 aa17.1■□□□□ 0.33
LIMS2-208ENST00000410011 DEFB106AQ8N104 65 aa17.1■□□□□ 0.33
LIMS2-208ENST00000410011 ARHGAP18Q8N392 663 aa17.1■□□□□ 0.33
LIMS2-208ENST00000410011 SPDYE1Q8NFV5 336 aaPredicted RBP17.1■□□□□ 0.33
LIMS2-208ENST00000410011 NPY6RQ99463 290 aa17.1■□□□□ 0.33
LIMS2-208ENST00000410011 CXCL16Q9H2A7 254 aa17.1■□□□□ 0.33
LIMS2-208ENST00000410011 ADAMTS10Q9H324 1103 aa17.1■□□□□ 0.33
LIMS2-208ENST00000410011 SNX15Q9NRS6 342 aa17.1■□□□□ 0.33
LIMS2-208ENST00000410011 SLC17A6Q9P2U8 582 aa17.1■□□□□ 0.33
LIMS2-208ENST00000410011 CDH22Q9UJ99 828 aa17.1■□□□□ 0.33
LIMS2-208ENST00000410011 RPS6KL1Q9Y6S9 549 aa17.1■□□□□ 0.33
LIMS2-208ENST00000410011 ARHGAP42A6NI28 874 aa17.09■□□□□ 0.33
LIMS2-208ENST00000410011 ADORA2BP29275 332 aa17.09■□□□□ 0.33
LIMS2-208ENST00000410011 SATB1Q01826 763 aa17.09■□□□□ 0.33
LIMS2-208ENST00000410011 IFRD2Q12894 506 aaPredicted RBP17.09■□□□□ 0.33
LIMS2-208ENST00000410011 PPIL2Q13356 520 aa17.09■□□□□ 0.33
LIMS2-208ENST00000410011 DPYSQ14117 519 aa17.09■□□□□ 0.33
LIMS2-208ENST00000410011 GRIK4Q16099 956 aa17.09■□□□□ 0.33
LIMS2-208ENST00000410011 CLEC14AQ86T13 490 aa17.09■□□□□ 0.33
LIMS2-208ENST00000410011 PDSS2Q86YH6 399 aa17.09■□□□□ 0.33
LIMS2-208ENST00000410011 ANKRD13AQ8IZ07 590 aa17.09■□□□□ 0.33
LIMS2-208ENST00000410011 SLC7A14Q8TBB6 771 aa17.09■□□□□ 0.33
LIMS2-208ENST00000410011 PGBD4Q96DM1 585 aa17.09■□□□□ 0.33
LIMS2-208ENST00000410011 PRDM12Q9H4Q4 367 aa17.09■□□□□ 0.33
LIMS2-208ENST00000410011 SSX2IPQ9Y2D8 614 aa17.09■□□□□ 0.33
LIMS2-208ENST00000410011 NR2E3Q9Y5X4 410 aa17.09■□□□□ 0.33
LIMS2-208ENST00000410011 MAGEB16A2A368 324 aa17.09■□□□□ 0.33
LIMS2-208ENST00000410011 KPNA7A9QM74 516 aa17.09■□□□□ 0.33
LIMS2-208ENST00000410011 DCLK1O15075 740 aa17.09■□□□□ 0.33
LIMS2-208ENST00000410011 NCAM2O15394 837 aa17.09■□□□□ 0.33
LIMS2-208ENST00000410011 USP1O94782 785 aa17.09■□□□□ 0.33
LIMS2-208ENST00000410011 BAG2O95816 211 aa17.09■□□□□ 0.33
LIMS2-208ENST00000410011 FAM163BP0C2L3 166 aa17.09■□□□□ 0.33
LIMS2-208ENST00000410011 SULT1E1P49888 294 aa17.09■□□□□ 0.33
LIMS2-208ENST00000410011 HK2P52789 917 aa17.09■□□□□ 0.33
LIMS2-208ENST00000410011 ZNF792Q3KQV3 632 aa17.09■□□□□ 0.33
LIMS2-208ENST00000410011 PPM1JQ5JR12 505 aa17.09■□□□□ 0.33
LIMS2-208ENST00000410011 PDZD4Q76G19 769 aaPredicted RBP17.09■□□□□ 0.33
LIMS2-208ENST00000410011 KCTD13Q8WZ19 329 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms