RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 VAMP2P63027 116 aa5.67□□□□□ -1.5
LSM5-206ENST00000409987 SLC45A4Q5BKX6 768 aa5.67□□□□□ -1.5
LSM5-206ENST00000409987 ATG16L1Q676U5 607 aa5.67□□□□□ -1.5
LSM5-206ENST00000409987 ZNF804AQ7Z570 1209 aa5.67□□□□□ -1.5
LSM5-206ENST00000409987 GALNT5Q7Z7M9 940 aa5.67□□□□□ -1.5
LSM5-206ENST00000409987 TTC30BQ8N4P2 665 aa5.67□□□□□ -1.5
LSM5-206ENST00000409987 ADAMTS18Q8TE60 1221 aa5.67□□□□□ -1.5
LSM5-206ENST00000409987 NEU4Q8WWR8 484 aaPredicted RBP5.67□□□□□ -1.5
LSM5-206ENST00000409987 AKAP1Q92667 903 aaKnown RBP eCLIP5.67□□□□□ -1.5
LSM5-206ENST00000409987 ARRDC3Q96B67 414 aa5.67□□□□□ -1.5
LSM5-206ENST00000409987 HVCN1Q96D96 273 aa5.67□□□□□ -1.5
LSM5-206ENST00000409987 RBM17Q96I25 401 aaKnown RBP5.67□□□□□ -1.5
LSM5-206ENST00000409987 NPAS1Q99742 590 aa5.67□□□□□ -1.5
LSM5-206ENST00000409987 TREX2Q9BQ50 279 aaPredicted RBP5.67□□□□□ -1.5
LSM5-206ENST00000409987 GPR63Q9BZJ6 419 aa5.67□□□□□ -1.5
LSM5-206ENST00000409987 TOR3AQ9H497 397 aa5.67□□□□□ -1.5
LSM5-206ENST00000409987 JMJD4Q9H9V9 463 aa5.67□□□□□ -1.5
LSM5-206ENST00000409987 IRAK4Q9NWZ3 460 aa5.67□□□□□ -1.5
LSM5-206ENST00000409987 GAR1Q9NY12 217 aaKnown RBP5.67□□□□□ -1.5
LSM5-206ENST00000409987 SAC3D1A6NKF1 404 aa5.66□□□□□ -1.5
LSM5-206ENST00000409987 B8ZZF3 427 aa5.66□□□□□ -1.5
LSM5-206ENST00000409987 KLK10O43240 276 aa5.66□□□□□ -1.5
LSM5-206ENST00000409987 PLOD3O60568 738 aa5.66□□□□□ -1.5
LSM5-206ENST00000409987 MT-CO3P00414 261 aa5.66□□□□□ -1.5
LSM5-206ENST00000409987 ALDOAP04075 364 aaKnown RBP5.66□□□□□ -1.5
LSM5-206ENST00000409987 ATP1A3P13637 1013 aa5.66□□□□□ -1.5
LSM5-206ENST00000409987 CPA1P15085 419 aa5.66□□□□□ -1.5
LSM5-206ENST00000409987 IGFBP2P18065 325 aa5.66□□□□□ -1.5
LSM5-206ENST00000409987 TNFRSF1AP19438 455 aa5.66□□□□□ -1.5
LSM5-206ENST00000409987 WDR5P61964 334 aaKnown RBP5.66□□□□□ -1.5
LSM5-206ENST00000409987 ABHD18Q0P651 414 aa5.66□□□□□ -1.5
LSM5-206ENST00000409987 MAPK7Q13164 816 aa5.66□□□□□ -1.5
LSM5-206ENST00000409987 MFSD13AQ14CX5 517 aa5.66□□□□□ -1.5
LSM5-206ENST00000409987 TSTD2Q5T7W7 516 aa5.66□□□□□ -1.5
LSM5-206ENST00000409987 SLC29A4Q7RTT9 530 aa5.66□□□□□ -1.5
LSM5-206ENST00000409987 LAS2Q8IYD9 372 aa5.66□□□□□ -1.5
LSM5-206ENST00000409987 Q8N1X5 172 aa5.66□□□□□ -1.5
LSM5-206ENST00000409987 LSMEM1Q8N8F7 131 aa5.66□□□□□ -1.5
LSM5-206ENST00000409987 USP38Q8NB14 1042 aa5.66□□□□□ -1.5
LSM5-206ENST00000409987 AP1M1Q9BXS5 423 aa5.66□□□□□ -1.5
LSM5-206ENST00000409987 ADGRE3Q9BY15 652 aa5.66□□□□□ -1.5
LSM5-206ENST00000409987 RNF26Q9BY78 433 aaPredicted RBP5.66□□□□□ -1.5
LSM5-206ENST00000409987 PDE11AQ9HCR9 933 aa5.66□□□□□ -1.5
LSM5-206ENST00000409987 ANKEF1Q9NU02 776 aa5.66□□□□□ -1.5
LSM5-206ENST00000409987 NKIRAS2Q9NYR9 191 aa5.66□□□□□ -1.5
LSM5-206ENST00000409987 ADAM21Q9UKJ8 722 aa5.66□□□□□ -1.5
LSM5-206ENST00000409987 B3GNT3Q9Y2A9 372 aa5.66□□□□□ -1.5
LSM5-206ENST00000409987 MYRFQ9Y2G1 1151 aa5.66□□□□□ -1.5
LSM5-206ENST00000409987 COPG1Q9Y678 874 aaKnown RBP5.66□□□□□ -1.5
LSM5-206ENST00000409987 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.65□□□□□ -1.5
LSM5-206ENST00000409987 TMEM191CA6NGB0 347 aa5.65□□□□□ -1.5
LSM5-206ENST00000409987 C3orf70A6NLC5 250 aaPredicted RBP5.65□□□□□ -1.5
LSM5-206ENST00000409987 H3BNC9 293 aa5.65□□□□□ -1.5
LSM5-206ENST00000409987 GRM8O00222 908 aa5.65□□□□□ -1.5
LSM5-206ENST00000409987 CLIC1O00299 241 aa5.65□□□□□ -1.5
LSM5-206ENST00000409987 PRYO14603 147 aa5.65□□□□□ -1.5
LSM5-206ENST00000409987 HNRNPCP07910 306 aaKnown RBP eCLIP5.65□□□□□ -1.5
LSM5-206ENST00000409987 SFPQP23246 707 aaKnown RBP eCLIP5.65□□□□□ -1.5
LSM5-206ENST00000409987 NDUFS1P28331 727 aa5.65□□□□□ -1.5
LSM5-206ENST00000409987 HOXD12P35452 270 aa5.65□□□□□ -1.5
LSM5-206ENST00000409987 PNPLA4P41247 253 aa5.65□□□□□ -1.5
LSM5-206ENST00000409987 STAT6P42226 847 aa5.65□□□□□ -1.5
LSM5-206ENST00000409987 PCP4P48539 62 aa5.65□□□□□ -1.5
LSM5-206ENST00000409987 NR1H2P55055 460 aa5.65□□□□□ -1.5
LSM5-206ENST00000409987 DCAF7P61962 342 aa5.65□□□□□ -1.5
LSM5-206ENST00000409987 CNGA3Q16281 694 aa5.65□□□□□ -1.5
LSM5-206ENST00000409987 CCNG2Q16589 344 aa5.65□□□□□ -1.5
LSM5-206ENST00000409987 FAM153CQ494X1 144 aa5.65□□□□□ -1.5
LSM5-206ENST00000409987 CBWD5Q5RIA9 395 aa5.65□□□□□ -1.5
LSM5-206ENST00000409987 DCDC5Q6ZRR9 648 aa5.65□□□□□ -1.5
LSM5-206ENST00000409987 GRASPQ7Z6J2 395 aaPredicted RBP5.65□□□□□ -1.5
LSM5-206ENST00000409987 CNPY4Q8N129 248 aa5.65□□□□□ -1.5
LSM5-206ENST00000409987 NKAIN3Q8N8D7 197 aa5.65□□□□□ -1.5
LSM5-206ENST00000409987 REPS1Q96D71 796 aa5.65□□□□□ -1.5
LSM5-206ENST00000409987 DAZAP1Q96EP5 407 aaKnown RBP5.65□□□□□ -1.5
LSM5-206ENST00000409987 RRP36Q96EU6 259 aaKnown RBP5.65□□□□□ -1.5
LSM5-206ENST00000409987 CLPBQ9H078 707 aa5.65□□□□□ -1.5
LSM5-206ENST00000409987 LMAN2LQ9H0V9 348 aa5.65□□□□□ -1.5
LSM5-206ENST00000409987 SH3GLB2Q9NR46 395 aa5.65□□□□□ -1.5
LSM5-206ENST00000409987 IL17RBQ9NRM6 502 aa5.65□□□□□ -1.5
LSM5-206ENST00000409987 OLA1Q9NTK5 396 aaKnown RBP5.65□□□□□ -1.5
LSM5-206ENST00000409987 NSMCE4AQ9NXX6 385 aa5.65□□□□□ -1.5
LSM5-206ENST00000409987 ENTPD2Q9Y5L3 495 aa5.65□□□□□ -1.5
LSM5-206ENST00000409987 LMTK3Q96Q04 1460 aa5.64□□□□□ -1.51
LSM5-206ENST00000409987 KAT6BQ8WYB5 2073 aa5.64□□□□□ -1.51
LSM5-206ENST00000409987 A0A087X0M5 115 aa5.64□□□□□ -1.51
LSM5-206ENST00000409987 A0A1B0GX30 115 aa5.64□□□□□ -1.51
LSM5-206ENST00000409987 TCRBV5S1A1TA0A578 114 aa5.64□□□□□ -1.51
LSM5-206ENST00000409987 FSD2A1L4K1 749 aa5.64□□□□□ -1.51
LSM5-206ENST00000409987 C16orf96A6NNT2 1141 aa5.64□□□□□ -1.51
LSM5-206ENST00000409987 TSPAN3O60637 253 aa5.64□□□□□ -1.51
LSM5-206ENST00000409987 ZBED4O75132 1171 aa5.64□□□□□ -1.51
LSM5-206ENST00000409987 HNRNPA1P09651 372 aaKnown RBP eCLIP5.64□□□□□ -1.51
LSM5-206ENST00000409987 LYL1P12980 280 aa5.64□□□□□ -1.51
LSM5-206ENST00000409987 SLC8A1P32418 973 aa5.64□□□□□ -1.51
LSM5-206ENST00000409987 KRT20P35900 424 aa5.64□□□□□ -1.51
LSM5-206ENST00000409987 SLC37A1P57057 533 aa5.64□□□□□ -1.51
LSM5-206ENST00000409987 CDK18Q07002 472 aa5.64□□□□□ -1.51
LSM5-206ENST00000409987 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.64□□□□□ -1.51
LSM5-206ENST00000409987 LARS2Q15031 903 aaKnown RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms