RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 CDK17Q00537 523 aa15.03■□□□□ -0
MCF2L-210ENST00000409954 CDH18Q13634 790 aa15.03■□□□□ -0
MCF2L-210ENST00000409954 CAMK4Q16566 473 aa15.03■□□□□ -0
MCF2L-210ENST00000409954 TPD52L1Q16890 204 aaPredicted RBP15.03■□□□□ -0
MCF2L-210ENST00000409954 HNRNPA1L2Q32P51 320 aaKnown RBP15.03■□□□□ -0
MCF2L-210ENST00000409954 DCAF6Q58WW2 860 aa15.03■□□□□ -0
MCF2L-210ENST00000409954 ZC3H12AQ5D1E8 599 aaKnown RBP15.03■□□□□ -0
MCF2L-210ENST00000409954 DBX2Q6ZNG2 339 aa15.03■□□□□ -0
MCF2L-210ENST00000409954 ZCCHC9Q8N567 271 aaKnown RBP15.03■□□□□ -0
MCF2L-210ENST00000409954 OR2I1PQ8NGU4 316 aa15.03■□□□□ -0
MCF2L-210ENST00000409954 WFDC5Q8TCV5 224 aa15.03■□□□□ -0
MCF2L-210ENST00000409954 NOX5Q96PH1 765 aa15.03■□□□□ -0
MCF2L-210ENST00000409954 RSPH9Q9H1X1 276 aaPredicted RBP15.03■□□□□ -0
MCF2L-210ENST00000409954 GAREM1Q9H706 876 aa15.03■□□□□ -0
MCF2L-210ENST00000409954 TMEM51Q9NW97 253 aa15.03■□□□□ -0
MCF2L-210ENST00000409954 ASNSD1Q9NWL6 643 aa15.03■□□□□ -0
MCF2L-210ENST00000409954 APEX2Q9UBZ4 518 aa15.03■□□□□ -0
MCF2L-210ENST00000409954 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.03■□□□□ -0
MCF2L-210ENST00000409954 ASCC3Q8N3C0 2202 aaKnown RBP15.02■□□□□ -0
MCF2L-210ENST00000409954 KCNU1A8MYU2 1149 aa15.02■□□□□ -0
MCF2L-210ENST00000409954 C1QTNF9BB2RNN3 333 aa15.02■□□□□ -0
MCF2L-210ENST00000409954 E5RJQ4 531 aa15.02■□□□□ -0
MCF2L-210ENST00000409954 LUC7L3O95232 432 aaKnown RBP15.02■□□□□ -0
MCF2L-210ENST00000409954 SEMA4FO95754 770 aa15.02■□□□□ -0
MCF2L-210ENST00000409954 C1QTNF9P0C862 333 aa15.02■□□□□ -0
MCF2L-210ENST00000409954 ABCB4P21439 1286 aa15.02■□□□□ -0
MCF2L-210ENST00000409954 TACR2P21452 398 aa15.02■□□□□ -0
MCF2L-210ENST00000409954 KRT9P35527 623 aa15.02■□□□□ -0
MCF2L-210ENST00000409954 CSKP41240 450 aa15.02■□□□□ -0
MCF2L-210ENST00000409954 BPIFB4P59827 614 aa15.02■□□□□ -0
MCF2L-210ENST00000409954 ECT2LQ008S8 904 aa15.02■□□□□ -0
MCF2L-210ENST00000409954 SULT2A1Q06520 285 aa15.02■□□□□ -0
MCF2L-210ENST00000409954 EIF4EBP2Q13542 120 aaPredicted RBP15.02■□□□□ -0
MCF2L-210ENST00000409954 ARHGAP44Q17R89 818 aa15.02■□□□□ -0
MCF2L-210ENST00000409954 TAC4Q86UU9 113 aa15.02■□□□□ -0
MCF2L-210ENST00000409954 LGI2Q8N0V4 545 aa15.02■□□□□ -0
MCF2L-210ENST00000409954 CFAP52Q8N1V2 620 aa15.02■□□□□ -0
MCF2L-210ENST00000409954 ZNF366Q8N895 744 aa15.02■□□□□ -0
MCF2L-210ENST00000409954 ADAM32Q8TC27 787 aa15.02■□□□□ -0
MCF2L-210ENST00000409954 SHC3Q92529 594 aa15.02■□□□□ -0
MCF2L-210ENST00000409954 MYO19Q96H55 970 aa15.02■□□□□ -0
MCF2L-210ENST00000409954 PPP1R13BQ96KQ4 1090 aa15.02■□□□□ -0
MCF2L-210ENST00000409954 NUCKS1Q9H1E3 243 aaKnown RBP15.02■□□□□ -0
MCF2L-210ENST00000409954 C6orf106Q9H6K1 298 aaPredicted RBP15.02■□□□□ -0
MCF2L-210ENST00000409954 CYTH4Q9UIA0 394 aa15.02■□□□□ -0
MCF2L-210ENST00000409954 INTS6Q9UL03 887 aaKnown RBP15.02■□□□□ -0
MCF2L-210ENST00000409954 PCDHGC3Q9UN70 934 aa15.02■□□□□ -0
MCF2L-210ENST00000409954 ERVW-1Q9UQF0 538 aa15.02■□□□□ -0
MCF2L-210ENST00000409954 PCDHGB2Q9Y5G2 931 aa15.02■□□□□ -0
MCF2L-210ENST00000409954 CHD8Q9HCK8 2581 aa15.02□□□□□ -0.01
MCF2L-210ENST00000409954 BECN2A8MW95 431 aa15.01□□□□□ -0.01
MCF2L-210ENST00000409954 F5H5T6 163 aa15.01□□□□□ -0.01
MCF2L-210ENST00000409954 DFNA5O60443 496 aa15.01□□□□□ -0.01
MCF2L-210ENST00000409954 TOP3BO95985 862 aaKnown RBP15.01□□□□□ -0.01
MCF2L-210ENST00000409954 MOCS2O96007 188 aaPredicted RBP15.01□□□□□ -0.01
MCF2L-210ENST00000409954 IGLV3-25P01717 112 aa15.01□□□□□ -0.01
MCF2L-210ENST00000409954 SPINK2P20155 84 aa15.01□□□□□ -0.01
MCF2L-210ENST00000409954 CD27P26842 260 aa15.01□□□□□ -0.01
MCF2L-210ENST00000409954 PON1P27169 355 aa15.01□□□□□ -0.01
MCF2L-210ENST00000409954 CCR1P32246 355 aa15.01□□□□□ -0.01
MCF2L-210ENST00000409954 MTIF2P46199 727 aaKnown RBP15.01□□□□□ -0.01
MCF2L-210ENST00000409954 CSNK1EP49674 416 aaKnown RBP15.01□□□□□ -0.01
MCF2L-210ENST00000409954 PLK1P53350 603 aa15.01□□□□□ -0.01
MCF2L-210ENST00000409954 PDCLQ13371 301 aa15.01□□□□□ -0.01
MCF2L-210ENST00000409954 HLA-BQ31612 363 aa15.01□□□□□ -0.01
MCF2L-210ENST00000409954 FSCBQ5H9T9 825 aa15.01□□□□□ -0.01
MCF2L-210ENST00000409954 PITRM1Q5JRX3 1037 aa15.01□□□□□ -0.01
MCF2L-210ENST00000409954 TTC39BQ5VTQ0 682 aaPredicted RBP15.01□□□□□ -0.01
MCF2L-210ENST00000409954 RNF219Q5W0B1 726 aaPredicted RBP15.01□□□□□ -0.01
MCF2L-210ENST00000409954 GLRX5Q86SX6 157 aa15.01□□□□□ -0.01
MCF2L-210ENST00000409954 IRF2BP1Q8IU81 584 aa15.01□□□□□ -0.01
MCF2L-210ENST00000409954 NAXDQ8IW45 347 aa15.01□□□□□ -0.01
MCF2L-210ENST00000409954 FAM114A1Q8IWE2 563 aa15.01□□□□□ -0.01
MCF2L-210ENST00000409954 WDTC1Q8N5D0 677 aa15.01□□□□□ -0.01
MCF2L-210ENST00000409954 GANCQ8TET4 914 aa15.01□□□□□ -0.01
MCF2L-210ENST00000409954 RNF34Q969K3 372 aa15.01□□□□□ -0.01
MCF2L-210ENST00000409954 SKA1Q96BD8 255 aa15.01□□□□□ -0.01
MCF2L-210ENST00000409954 BIRC7Q96CA5 298 aa15.01□□□□□ -0.01
MCF2L-210ENST00000409954 MRGPRX3Q96LB0 322 aa15.01□□□□□ -0.01
MCF2L-210ENST00000409954 PRICKLE1Q96MT3 831 aaPredicted RBP15.01□□□□□ -0.01
MCF2L-210ENST00000409954 PABPC3Q9H361 631 aaKnown RBP15.01□□□□□ -0.01
MCF2L-210ENST00000409954 TM7SF3Q9NS93 570 aa15.01□□□□□ -0.01
MCF2L-210ENST00000409954 FBXL12Q9NXK8 326 aa15.01□□□□□ -0.01
MCF2L-210ENST00000409954 TPX2Q9ULW0 747 aaKnown RBP15.01□□□□□ -0.01
MCF2L-210ENST00000409954 APOBEC2Q9Y235 224 aaKnown RBP15.01□□□□□ -0.01
MCF2L-210ENST00000409954 EDDM13A0A1B0GTR0 161 aa15□□□□□ -0.01
MCF2L-210ENST00000409954 HYAL3O43820 417 aaPredicted RBP15□□□□□ -0.01
MCF2L-210ENST00000409954 HSF2BPO75031 334 aa15□□□□□ -0.01
MCF2L-210ENST00000409954 SIN3BO75182 1162 aa15□□□□□ -0.01
MCF2L-210ENST00000409954 GRIA4P48058 902 aa15□□□□□ -0.01
MCF2L-210ENST00000409954 VASPP50552 380 aaPredicted RBP15□□□□□ -0.01
MCF2L-210ENST00000409954 FAM193AP78312 1265 aa15□□□□□ -0.01
MCF2L-210ENST00000409954 RABGAP1LQ5R372 815 aa15□□□□□ -0.01
MCF2L-210ENST00000409954 C9orf64Q5T6V5 341 aa15□□□□□ -0.01
MCF2L-210ENST00000409954 RAP1GAP2Q684P5 730 aa15□□□□□ -0.01
MCF2L-210ENST00000409954 GJB7Q6PEY0 223 aa15□□□□□ -0.01
MCF2L-210ENST00000409954 LRSAM1Q6UWE0 723 aa15□□□□□ -0.01
MCF2L-210ENST00000409954 C11orf57Q6ZUT1 292 aaPredicted RBP15□□□□□ -0.01
MCF2L-210ENST00000409954 CHSY1Q86X52 802 aa15□□□□□ -0.01
MCF2L-210ENST00000409954 CACUL1Q86Y37 369 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms