RNA–Protein interactions for RNA: ENST00000409884.5

LRRTM4-204, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRRTM4, Length 2,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-204ENST00000409884 NME3Q13232 169 aa11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 HADHQ16836 314 aaKnown RBP11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 CTXN3Q4LDR2 81 aa11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 ODF2Q5BJF6 829 aa11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 TFDP3Q5H9I0 405 aa11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 FUT10Q6P4F1 479 aa11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 CAPN12Q6ZSI9 719 aa11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 SAMD14Q8IZD0 417 aaPredicted RBP11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 NETO2Q8NC67 525 aa11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 SUN5Q8TC36 379 aa11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 ACMSDQ8TDX5 336 aa11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 KCTD13Q8WZ19 329 aa11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 CASP10Q92851 521 aa11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 HIC2Q96JB3 615 aa11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 CATSPER2Q96P56 530 aa11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 SNRNP25Q9BV90 132 aaKnown RBP11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 DCLK3Q9C098 648 aa11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 SLITRK6Q9H5Y7 841 aa11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 ANLNQ9NQW6 1124 aa11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 HSFX1Q9UBD0 423 aa11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 NUDT5Q9UKK9 219 aa11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 DNPEPQ9ULA0 475 aa11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 MTUS1Q9ULD2 1270 aa11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 SLC27A5Q9Y2P5 690 aa11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 SNX24Q9Y343 169 aa11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 LRRC42Q9Y546 428 aa11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 I6L893 689 aaPredicted RBP11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 PRPSAP2O60256 369 aa11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 CST8O60676 142 aa11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 PDHA1P08559 390 aa11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 KRT7P08729 469 aa11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 RAG1P15918 1043 aa11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 GRIK1P39086 918 aa11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 DAOAP59103 153 aa11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 HLTFQ14527 1009 aaKnown RBP eCLIP11.05□□□□□ -0.645e-8■■■■■ 29.6
LRRTM4-204ENST00000409884 CRY1Q16526 586 aa11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 CYP1B1Q16678 543 aa11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 PPP6R3Q5H9R7 873 aaPredicted RBP11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 RAB41Q5JT25 222 aa11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 CNKSR3Q6P9H4 555 aa11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 CCBE1Q6UXH8 406 aaPredicted RBP11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 NPNTQ6UXI9 565 aa11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 C3orf62Q6ZUJ4 267 aa11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 SND1Q7KZF4 910 aaKnown RBP eCLIP11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 POLNQ7Z5Q5 900 aa11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 ZDHHC17Q8IUH5 632 aa11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 SPATA2LQ8IUW3 424 aaPredicted RBP11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 CMASQ8NFW8 434 aaPredicted RBP11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 AENQ8WTP8 325 aaKnown RBP11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 DDX23Q9BUQ8 820 aaKnown RBP11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 PLVAPQ9BX97 442 aa11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 CSNK1G1Q9HCP0 422 aa11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.05□□□□□ -0.64
LRRTM4-204ENST00000409884 CCDC162PA2VCL2 907 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 FAM25EA8MYX2 175 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 DPYSL4O14531 572 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 SGTAO43765 313 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 ZBED1O96006 694 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 TIMP1P01033 207 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 ETS1P14921 441 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 ATP6V1C1P21283 382 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 CHRNA3P32297 505 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 PCK1P35558 622 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 MATKP42679 507 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 SULT1E1P49888 294 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 C16orf59Q7L2K0 433 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 NECAB2Q7Z6G3 386 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 IFT20Q8IY31 132 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 SCAIQ8N9R8 606 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 TSEN2Q8NCE0 465 aaKnown RBP11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 CWH43Q9H720 699 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 LRRC19Q9H756 370 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 PIGVQ9NUD9 493 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 MRGBPQ9NV56 204 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 FAM32AQ9Y421 112 aaKnown RBP11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 MRPL42Q9Y6G3 142 aaKnown RBP11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 M0QYT0 321 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 TRAPPC3O43617 180 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 HSF2BPO75031 334 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 VNN2O95498 520 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 ASLP04424 464 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 GSTA1P08263 222 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 ITGA2BP08514 1039 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 ZSCAN5DPP0CG00 497 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 NCAM1P13591 858 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 FGFR3P22607 806 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 RPL21P46778 160 aaKnown RBP11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 ATP1A2P50993 1020 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 SLC5A3P53794 718 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 SEC24CP53992 1094 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 DPYSL3Q14195 570 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 TTMPQ5BVD1 217 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 EFHC1Q5JVL4 640 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 SLC7A14Q8TBB6 771 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 CCT6BQ92526 530 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 CENPIQ92674 756 aaPredicted RBP11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 TOP1MTQ969P6 601 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 HAPLN3Q96S86 360 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 ERP44Q9BS26 406 aa11.04□□□□□ -0.64
LRRTM4-204ENST00000409884 TMEM106CQ9BVX2 250 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms