RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 HIST1H2AAQ96QV6 131 aa5.02□□□□□ -1.61
CLK1-203ENST00000409769 WACQ9BTA9 647 aa5.02□□□□□ -1.61
CLK1-203ENST00000409769 RXFP3Q9NSD7 469 aa5.02□□□□□ -1.61
CLK1-203ENST00000409769 TBC1D23Q9NUY8 699 aa5.02□□□□□ -1.61
CLK1-203ENST00000409769 NKX1-2Q9UD57 310 aaPredicted RBP5.02□□□□□ -1.61
CLK1-203ENST00000409769 STEAP1Q9UHE8 339 aa5.02□□□□□ -1.61
CLK1-203ENST00000409769 KCPQ6ZWJ8 1503 aa5.02□□□□□ -1.61
CLK1-203ENST00000409769 SMIM35A0A1B0GVV1 85 aa5.01□□□□□ -1.61
CLK1-203ENST00000409769 POC1B-GALNT4F8VUJ3 575 aa5.01□□□□□ -1.61
CLK1-203ENST00000409769 UBE2Q2LH0YL09 131 aa5.01□□□□□ -1.61
CLK1-203ENST00000409769 HNRNPDLO14979 420 aaKnown RBP5.01□□□□□ -1.61
CLK1-203ENST00000409769 INSIG1O15503 277 aa5.01□□□□□ -1.61
CLK1-203ENST00000409769 SPRY2O43597 315 aa5.01□□□□□ -1.61
CLK1-203ENST00000409769 TMPRSS11DO60235 418 aa5.01□□□□□ -1.61
CLK1-203ENST00000409769 SNX2O60749 519 aa5.01□□□□□ -1.61
CLK1-203ENST00000409769 USP1O94782 785 aa5.01□□□□□ -1.61
CLK1-203ENST00000409769 CBSLP0DN79 551 aa5.01□□□□□ -1.61
CLK1-203ENST00000409769 HTR7P34969 479 aa5.01□□□□□ -1.61
CLK1-203ENST00000409769 CBSP35520 551 aa5.01□□□□□ -1.61
CLK1-203ENST00000409769 NEK3P51956 506 aa5.01□□□□□ -1.61
CLK1-203ENST00000409769 ITGA8P53708 1063 aa5.01□□□□□ -1.61
CLK1-203ENST00000409769 BTKQ06187 659 aa5.01□□□□□ -1.61
CLK1-203ENST00000409769 STK3Q13188 491 aa5.01□□□□□ -1.61
CLK1-203ENST00000409769 FHL1Q13642 323 aa5.01□□□□□ -1.61
CLK1-203ENST00000409769 FHL3Q13643 280 aa5.01□□□□□ -1.61
CLK1-203ENST00000409769 DAZAP2Q15038 168 aaPredicted RBP5.01□□□□□ -1.61
CLK1-203ENST00000409769 TWIST1Q15672 202 aa5.01□□□□□ -1.61
CLK1-203ENST00000409769 SLC35G1Q2M3R5 365 aa5.01□□□□□ -1.61
CLK1-203ENST00000409769 RNASE12Q5GAN4 147 aaKnown RBP5.01□□□□□ -1.61
CLK1-203ENST00000409769 ZNF772Q68DY9 489 aaPredicted RBP5.01□□□□□ -1.61
CLK1-203ENST00000409769 AWAT2Q6E213 333 aa5.01□□□□□ -1.61
CLK1-203ENST00000409769 MRNIPQ6NTE8 343 aa5.01□□□□□ -1.61
CLK1-203ENST00000409769 MIS18BP1Q6P0N0 1132 aa5.01□□□□□ -1.61
CLK1-203ENST00000409769 SLC2A7Q6PXP3 512 aa5.01□□□□□ -1.61
CLK1-203ENST00000409769 TECPR1Q7Z6L1 1165 aa5.01□□□□□ -1.61
CLK1-203ENST00000409769 GALNT4Q8N4A0 578 aa5.01□□□□□ -1.61
CLK1-203ENST00000409769 LINC01465Q8N7H1 131 aa5.01□□□□□ -1.61
CLK1-203ENST00000409769 TSPYL6Q8N831 410 aa5.01□□□□□ -1.61
CLK1-203ENST00000409769 TERB1Q8NA31 727 aa5.01□□□□□ -1.61
CLK1-203ENST00000409769 PRSS3P2Q8NHM4 247 aa5.01□□□□□ -1.61
CLK1-203ENST00000409769 TNIP3Q96KP6 325 aa5.01□□□□□ -1.61
CLK1-203ENST00000409769 SNX27Q96L92 541 aa5.01□□□□□ -1.61
CLK1-203ENST00000409769 SGCZQ96LD1 299 aa5.01□□□□□ -1.61
CLK1-203ENST00000409769 WDR24Q96S15 920 aa5.01□□□□□ -1.61
CLK1-203ENST00000409769 ELAC2Q9BQ52 826 aaKnown RBP5.01□□□□□ -1.61
CLK1-203ENST00000409769 SH2D3AQ9BRG2 576 aa5.01□□□□□ -1.61
CLK1-203ENST00000409769 TM7SF3Q9NS93 570 aa5.01□□□□□ -1.61
CLK1-203ENST00000409769 CCNL1Q9UK58 526 aaPredicted RBP5.01□□□□□ -1.61
CLK1-203ENST00000409769 SLC27A6Q9Y2P4 619 aa5.01□□□□□ -1.61
CLK1-203ENST00000409769 BTAF1O14981 1849 aa5.01□□□□□ -1.61
CLK1-203ENST00000409769 ZNF831Q5JPB2 1677 aa5.01□□□□□ -1.61
CLK1-203ENST00000409769 LY75O60449 1722 aa5□□□□□ -1.61
CLK1-203ENST00000409769 TJP1Q07157 1748 aa5□□□□□ -1.61
CLK1-203ENST00000409769 SOS1Q07889 1333 aaPredicted RBP5□□□□□ -1.61
CLK1-203ENST00000409769 KCNU1A8MYU2 1149 aa5□□□□□ -1.61
CLK1-203ENST00000409769 AP4M1O00189 453 aa5□□□□□ -1.61
CLK1-203ENST00000409769 NCK2O43639 380 aa5□□□□□ -1.61
CLK1-203ENST00000409769 COQ9O75208 318 aa5□□□□□ -1.61
CLK1-203ENST00000409769 NTN1O95631 604 aa5□□□□□ -1.61
CLK1-203ENST00000409769 MYL3P08590 195 aa5□□□□□ -1.61
CLK1-203ENST00000409769 IDEP14735 1019 aa5□□□□□ -1.61
CLK1-203ENST00000409769 SFPQP23246 707 aaKnown RBP eCLIP5□□□□□ -1.61
CLK1-203ENST00000409769 ATICP31939 592 aa5□□□□□ -1.61
CLK1-203ENST00000409769 EIF4A1P60842 406 aaKnown RBP5□□□□□ -1.61
CLK1-203ENST00000409769 RBM6P78332 1123 aaKnown RBP5□□□□□ -1.61
CLK1-203ENST00000409769 PSG6Q00889 435 aa5□□□□□ -1.61
CLK1-203ENST00000409769 TEFQ10587 303 aa5□□□□□ -1.61
CLK1-203ENST00000409769 PMS2P11Q13670 270 aa5□□□□□ -1.61
CLK1-203ENST00000409769 ACOX1Q15067 660 aa5□□□□□ -1.61
CLK1-203ENST00000409769 KRT24Q2M2I5 525 aa5□□□□□ -1.61
CLK1-203ENST00000409769 SLC5A9Q2M3M2 681 aa5□□□□□ -1.61
CLK1-203ENST00000409769 FAXCQ5TGI0 409 aa5□□□□□ -1.61
CLK1-203ENST00000409769 KIRREL2Q6UWL6 708 aa5□□□□□ -1.61
CLK1-203ENST00000409769 NAPRTQ6XQN6 538 aa5□□□□□ -1.61
CLK1-203ENST00000409769 DPY19L3Q6ZPD9 716 aa5□□□□□ -1.61
CLK1-203ENST00000409769 MRPL10Q7Z7H8 261 aaKnown RBP5□□□□□ -1.61
CLK1-203ENST00000409769 METTL25Q8N6Q8 603 aa5□□□□□ -1.61
CLK1-203ENST00000409769 CCDC150Q8NCX0 1101 aa5□□□□□ -1.61
CLK1-203ENST00000409769 SUN3Q8TAQ9 357 aa5□□□□□ -1.61
CLK1-203ENST00000409769 C5orf34Q96MH7 638 aa5□□□□□ -1.61
CLK1-203ENST00000409769 FAM118BQ9BPY3 351 aa5□□□□□ -1.61
CLK1-203ENST00000409769 SLC25A32Q9H2D1 315 aa5□□□□□ -1.61
CLK1-203ENST00000409769 TMEM8AQ9HCN3 771 aa5□□□□□ -1.61
CLK1-203ENST00000409769 NLRC4Q9NPP4 1024 aa5□□□□□ -1.61
CLK1-203ENST00000409769 NECTIN3Q9NQS3 549 aa5□□□□□ -1.61
CLK1-203ENST00000409769 SNX15Q9NRS6 342 aa5□□□□□ -1.61
CLK1-203ENST00000409769 MIS18AQ9NYP9 233 aa5□□□□□ -1.61
CLK1-203ENST00000409769 TMOD4Q9NZQ9 345 aa5□□□□□ -1.61
CLK1-203ENST00000409769 TSPYL4Q9UJ04 414 aa5□□□□□ -1.61
CLK1-203ENST00000409769 LAS1LQ9Y4W2 734 aaKnown RBP5□□□□□ -1.61
CLK1-203ENST00000409769 N4BP2Q86UW6 1770 aaPredicted RBP5□□□□□ -1.61
CLK1-203ENST00000409769 COL5A3P25940 1745 aaPredicted RBP5□□□□□ -1.61
CLK1-203ENST00000409769 RREB1Q92766 1687 aa4.99□□□□□ -1.61
CLK1-203ENST00000409769 RGS12O14924 1447 aa4.99□□□□□ -1.61
CLK1-203ENST00000409769 MYH14Q7Z406 1995 aaKnown RBP4.99□□□□□ -1.61
CLK1-203ENST00000409769 CCDC194A0A1B0GVG4 234 aa4.99□□□□□ -1.61
CLK1-203ENST00000409769 MYMKA6NI61 221 aa4.99□□□□□ -1.61
CLK1-203ENST00000409769 BTBD19C9JJ37 291 aa4.99□□□□□ -1.61
CLK1-203ENST00000409769 E5RJQ4 531 aa4.99□□□□□ -1.61
CLK1-203ENST00000409769 SOCS2O14508 198 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms