RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 KRT37O76014 449 aa15.26■□□□□ 0.03
CBX3-203ENST00000409747 SEMA4FO95754 770 aa15.26■□□□□ 0.03
CBX3-203ENST00000409747 TRUB2O95900 331 aaKnown RBP15.26■□□□□ 0.03
CBX3-203ENST00000409747 IGLV3-25P01717 112 aa15.26■□□□□ 0.03
CBX3-203ENST00000409747 SRPRAP08240 638 aaKnown RBP15.26■□□□□ 0.03
CBX3-203ENST00000409747 SLC9A1P19634 815 aa15.26■□□□□ 0.03
CBX3-203ENST00000409747 CSKP41240 450 aa15.26■□□□□ 0.03
CBX3-203ENST00000409747 MTIF2P46199 727 aaKnown RBP15.26■□□□□ 0.03
CBX3-203ENST00000409747 AFF3P51826 1226 aaKnown RBP15.26■□□□□ 0.03
CBX3-203ENST00000409747 MTA1Q13330 715 aa15.26■□□□□ 0.03
CBX3-203ENST00000409747 ARID5BQ14865 1188 aa15.26■□□□□ 0.03
CBX3-203ENST00000409747 ZNF423Q2M1K9 1284 aa15.26■□□□□ 0.03
CBX3-203ENST00000409747 DCAF6Q58WW2 860 aa15.26■□□□□ 0.03
CBX3-203ENST00000409747 TTC39BQ5VTQ0 682 aaPredicted RBP15.26■□□□□ 0.03
CBX3-203ENST00000409747 CHSY1Q86X52 802 aa15.26■□□□□ 0.03
CBX3-203ENST00000409747 NAXDQ8IW45 347 aa15.26■□□□□ 0.03
CBX3-203ENST00000409747 LGI2Q8N0V4 545 aa15.26■□□□□ 0.03
CBX3-203ENST00000409747 SHC3Q92529 594 aa15.26■□□□□ 0.03
CBX3-203ENST00000409747 SCNM1Q9BWG6 230 aa15.26■□□□□ 0.03
CBX3-203ENST00000409747 RSPH9Q9H1X1 276 aaPredicted RBP15.26■□□□□ 0.03
CBX3-203ENST00000409747 FAM204AQ9H8W3 233 aa15.26■□□□□ 0.03
CBX3-203ENST00000409747 ASNSD1Q9NWL6 643 aa15.26■□□□□ 0.03
CBX3-203ENST00000409747 KIAA1522Q9P206 1035 aaPredicted RBP15.26■□□□□ 0.03
CBX3-203ENST00000409747 CYTH4Q9UIA0 394 aa15.26■□□□□ 0.03
CBX3-203ENST00000409747 PCDHGC3Q9UN70 934 aa15.26■□□□□ 0.03
CBX3-203ENST00000409747 NCKAP1Q9Y2A7 1128 aa15.26■□□□□ 0.03
CBX3-203ENST00000409747 NEUROG3Q9Y4Z2 214 aa15.26■□□□□ 0.03
CBX3-203ENST00000409747 PCDHB9Q9Y5E1 797 aa15.26■□□□□ 0.03
CBX3-203ENST00000409747 TMEM8BA6NDV4 472 aa15.26■□□□□ 0.03
CBX3-203ENST00000409747 BECN2A8MW95 431 aa15.26■□□□□ 0.03
CBX3-203ENST00000409747 F5H5T6 163 aa15.26■□□□□ 0.03
CBX3-203ENST00000409747 HSF2BPO75031 334 aa15.26■□□□□ 0.03
CBX3-203ENST00000409747 ZNF883P0CG24 379 aa15.26■□□□□ 0.03
CBX3-203ENST00000409747 PRKCSHP14314 528 aaPredicted RBP15.26■□□□□ 0.03
CBX3-203ENST00000409747 TACR2P21452 398 aa15.26■□□□□ 0.03
CBX3-203ENST00000409747 ACSL1P33121 698 aa15.26■□□□□ 0.03
CBX3-203ENST00000409747 MATKP42679 507 aa15.26■□□□□ 0.03
CBX3-203ENST00000409747 CDK17Q00537 523 aa15.26■□□□□ 0.03
CBX3-203ENST00000409747 PTK2Q05397 1052 aa15.26■□□□□ 0.03
CBX3-203ENST00000409747 TEAD4Q15561 434 aa15.26■□□□□ 0.03
CBX3-203ENST00000409747 HNRNPA1L2Q32P51 320 aaKnown RBP15.26■□□□□ 0.03
CBX3-203ENST00000409747 ZC3H12AQ5D1E8 599 aaKnown RBP15.26■□□□□ 0.03
CBX3-203ENST00000409747 PITRM1Q5JRX3 1037 aa15.26■□□□□ 0.03
CBX3-203ENST00000409747 EFHC1Q5JVL4 640 aa15.26■□□□□ 0.03
CBX3-203ENST00000409747 RNF219Q5W0B1 726 aaPredicted RBP15.26■□□□□ 0.03
CBX3-203ENST00000409747 GJB7Q6PEY0 223 aa15.26■□□□□ 0.03
CBX3-203ENST00000409747 USP30Q70CQ3 517 aa15.26■□□□□ 0.03
CBX3-203ENST00000409747 CFAP52Q8N1V2 620 aa15.26■□□□□ 0.03
CBX3-203ENST00000409747 PPP1R13BQ96KQ4 1090 aa15.26■□□□□ 0.03
CBX3-203ENST00000409747 OSGEPQ9NPF4 335 aa15.26■□□□□ 0.03
CBX3-203ENST00000409747 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.26■□□□□ 0.03
CBX3-203ENST00000409747 CEP83Q9Y592 693 aa15.26■□□□□ 0.03
CBX3-203ENST00000409747 KCNU1A8MYU2 1149 aa15.25■□□□□ 0.03
CBX3-203ENST00000409747 ABCB4P21439 1286 aa15.25■□□□□ 0.03
CBX3-203ENST00000409747 PON1P27169 355 aa15.25■□□□□ 0.03
CBX3-203ENST00000409747 CCR1P32246 355 aa15.25■□□□□ 0.03
CBX3-203ENST00000409747 OXCT1P55809 520 aa15.25■□□□□ 0.03
CBX3-203ENST00000409747 SLC12A1Q13621 1099 aa15.25■□□□□ 0.03
CBX3-203ENST00000409747 RABGAP1LQ5R372 815 aa15.25■□□□□ 0.03
CBX3-203ENST00000409747 RAP1GAP2Q684P5 730 aa15.25■□□□□ 0.03
CBX3-203ENST00000409747 MYO19Q96H55 970 aa15.25■□□□□ 0.03
CBX3-203ENST00000409747 C6orf106Q9H6K1 298 aaPredicted RBP15.25■□□□□ 0.03
CBX3-203ENST00000409747 ACP6Q9NPH0 428 aa15.25■□□□□ 0.03
CBX3-203ENST00000409747 CHMP5Q9NZZ3 219 aa15.25■□□□□ 0.03
CBX3-203ENST00000409747 DACH1Q9UI36 760 aa15.25■□□□□ 0.03
CBX3-203ENST00000409747 INTS6Q9UL03 887 aaKnown RBP15.25■□□□□ 0.03
CBX3-203ENST00000409747 ITIH6Q6UXX5 1313 aa15.24■□□□□ 0.03
CBX3-203ENST00000409747 TARSL2A2RTX5 802 aaKnown RBP15.24■□□□□ 0.03
CBX3-203ENST00000409747 SH3BP5O60239 455 aa15.24■□□□□ 0.03
CBX3-203ENST00000409747 SPINK2P20155 84 aa15.24■□□□□ 0.03
CBX3-203ENST00000409747 KRT9P35527 623 aa15.24■□□□□ 0.03
CBX3-203ENST00000409747 ECT2LQ008S8 904 aa15.24■□□□□ 0.03
CBX3-203ENST00000409747 TRIP6Q15654 476 aaKnown RBP15.24■□□□□ 0.03
CBX3-203ENST00000409747 MAN2A1Q16706 1144 aa15.24■□□□□ 0.03
CBX3-203ENST00000409747 FSCBQ5H9T9 825 aa15.24■□□□□ 0.03
CBX3-203ENST00000409747 C1orf216Q8TAB5 229 aa15.24■□□□□ 0.03
CBX3-203ENST00000409747 GANCQ8TET4 914 aa15.24■□□□□ 0.03
CBX3-203ENST00000409747 MYEOVQ96EZ4 313 aa15.24■□□□□ 0.03
CBX3-203ENST00000409747 MRGPRX3Q96LB0 322 aa15.24■□□□□ 0.03
CBX3-203ENST00000409747 SLC2A13Q96QE2 648 aa15.24■□□□□ 0.03
CBX3-203ENST00000409747 PPP1R9BQ96SB3 815 aa15.24■□□□□ 0.03
CBX3-203ENST00000409747 CPXM1Q96SM3 734 aa15.24■□□□□ 0.03
CBX3-203ENST00000409747 PABPC3Q9H361 631 aaKnown RBP15.24■□□□□ 0.03
CBX3-203ENST00000409747 GAREM1Q9H706 876 aa15.24■□□□□ 0.03
CBX3-203ENST00000409747 DDIT4Q9NX09 232 aa15.24■□□□□ 0.03
CBX3-203ENST00000409747 XPO7Q9UIA9 1087 aaKnown RBP15.24■□□□□ 0.03
CBX3-203ENST00000409747 ERVW-1Q9UQF0 538 aa15.24■□□□□ 0.03
CBX3-203ENST00000409747 ASPMQ8IZT6 3477 aa15.24■□□□□ 0.03
CBX3-203ENST00000409747 EDDM13A0A1B0GTR0 161 aa15.23■□□□□ 0.03
CBX3-203ENST00000409747 PCNX2A6NKB5 2137 aa15.23■□□□□ 0.03
CBX3-203ENST00000409747 C1QTNF9BB2RNN3 333 aa15.23■□□□□ 0.03
CBX3-203ENST00000409747 HYAL3O43820 417 aaPredicted RBP15.23■□□□□ 0.03
CBX3-203ENST00000409747 SIN3BO75182 1162 aa15.23■□□□□ 0.03
CBX3-203ENST00000409747 C1QTNF9P0C862 333 aa15.23■□□□□ 0.03
CBX3-203ENST00000409747 NNMTP40261 264 aa15.23■□□□□ 0.03
CBX3-203ENST00000409747 GRIA4P48058 902 aa15.23■□□□□ 0.03
CBX3-203ENST00000409747 SULT2A1Q06520 285 aa15.23■□□□□ 0.03
CBX3-203ENST00000409747 EIF4EBP2Q13542 120 aaPredicted RBP15.23■□□□□ 0.03
CBX3-203ENST00000409747 C11orf57Q6ZUT1 292 aaPredicted RBP15.23■□□□□ 0.03
CBX3-203ENST00000409747 IRF2BP1Q8IU81 584 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms