RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 PPP1R2P1Q96PQ5 205 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 ARL15Q9NXU5 204 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 PAICSP22234 425 aaKnown RBP8.58□□□□□ -1.04
SCN9A-203ENST00000409672 CYP4F2P78329 520 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 CYP4F3Q08477 520 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 ATG9AQ7Z3C6 839 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 FMR1NBQ8N0W7 255 aaPredicted RBP8.58□□□□□ -1.04
SCN9A-203ENST00000409672 CMTM5Q96DZ9 223 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 TRNT1Q96Q11 434 aaKnown RBP8.58□□□□□ -1.04
SCN9A-203ENST00000409672 ILKAPQ9H0C8 392 aaPredicted RBP8.58□□□□□ -1.04
SCN9A-203ENST00000409672 POLR1BQ9H9Y6 1135 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 NCDNQ9UBB6 729 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 UXTQ9UBK9 157 aaPredicted RBP8.58□□□□□ -1.04
SCN9A-203ENST00000409672 WDR27A2RRH5 827 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 KCNK1O00180 336 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 PSMD11O00231 422 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 YBX3P16989 372 aaKnown RBP eCLIP8.58□□□□□ -1.04
SCN9A-203ENST00000409672 ARID3BQ8IVW6 561 aaPredicted RBP8.58□□□□□ -1.04
SCN9A-203ENST00000409672 FBXO36Q8NEA4 188 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 TATDN2Q93075 761 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 RAD51AP1Q96B01 352 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 KLHL28Q9NXS3 571 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 CDHR2Q9BYE9 1310 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 RAD51CO43502 376 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 SCGNO76038 276 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 NPY2RP49146 381 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 CLK3P49761 638 aaKnown RBP8.58□□□□□ -1.04
SCN9A-203ENST00000409672 ALDH5A1P51649 535 aaPredicted RBP8.58□□□□□ -1.04
SCN9A-203ENST00000409672 IRX1P78414 480 aaPredicted RBP8.58□□□□□ -1.04
SCN9A-203ENST00000409672 PTSQ03393 145 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 ALG11Q2TAA5 492 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 TTC33Q6PID6 262 aaPredicted RBP8.58□□□□□ -1.04
SCN9A-203ENST00000409672 RIPOR1Q6ZS17 1223 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 HIPK3Q9H422 1215 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 SERHL2Q9H4I8 314 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 SERHLQ9NQF3 203 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 TRPV2Q9Y5S1 764 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 SPATA31E1Q6ZUB1 1445 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 FFAR3O14843 346 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 GPR42O15529 346 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 RNASEH2AO75792 299 aaKnown RBP8.58□□□□□ -1.04
SCN9A-203ENST00000409672 SERPINB9P50453 376 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 SLC18A3Q16572 532 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 AGKQ53H12 422 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 ARMC12Q5T9G4 340 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 ZNF57Q68EA5 555 aaPredicted RBP8.58□□□□□ -1.04
SCN9A-203ENST00000409672 IDI2Q9BXS1 227 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 NYAP2Q9P242 653 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 SNX13Q9Y5W8 968 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 ALG6Q9Y672 507 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 MAGI2Q86UL8 1455 aa8.58□□□□□ -1.04
SCN9A-203ENST00000409672 WNT10BO00744 389 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 SNUPNO95149 360 aaKnown RBP8.57□□□□□ -1.04
SCN9A-203ENST00000409672 PRKAR2AP13861 404 aaKnown RBP8.57□□□□□ -1.04
SCN9A-203ENST00000409672 SOX6P35712 828 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 MASP1P48740 699 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 COPZ1P61923 177 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 OTUD4Q01804 1114 aaKnown RBP8.57□□□□□ -1.04
SCN9A-203ENST00000409672 ZBTB10Q96DT7 871 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 DPEP2Q9H4A9 486 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 MCCC2Q9HCC0 563 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 MPP6Q9NZW5 540 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 CD84Q9UIB8 345 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 USP42Q9H9J4 1324 aaKnown RBP8.57□□□□□ -1.04
SCN9A-203ENST00000409672 FOXN3O00409 490 aaPredicted RBP8.57□□□□□ -1.04
SCN9A-203ENST00000409672 RECQL4O94761 1208 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 NUP107P57740 925 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 BMPR2Q13873 1038 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 SF1Q15637 639 aaKnown RBP8.57□□□□□ -1.04
SCN9A-203ENST00000409672 ERMARDQ5T6L9 678 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 ZNF280BQ86YH2 543 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 MCEMP1Q8IX19 187 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 CHKBQ9Y259 395 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 VPS9D1Q9Y2B5 631 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 EFR3BQ9Y2G0 817 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 RNF17Q9BXT8 1623 aaKnown RBP8.57□□□□□ -1.04
SCN9A-203ENST00000409672 SMIM31A0A1B0GVY4 71 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 DCLK1O15075 740 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 MATN4O95460 622 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 SERPINF2P08697 491 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 MGAT1P26572 445 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 ST13P50502 369 aaKnown RBP8.57□□□□□ -1.04
SCN9A-203ENST00000409672 SUZ12Q15022 739 aaKnown RBP8.57□□□□□ -1.04
SCN9A-203ENST00000409672 MINDY4Q4G0A6 757 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 SCIMPQ6UWF3 145 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 GALNTL5Q7Z4T8 443 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 ADGRG6Q86SQ4 1221 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 PRUNE1Q86TP1 453 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 FAM120BQ96EK7 910 aaKnown RBP8.57□□□□□ -1.04
SCN9A-203ENST00000409672 SLC35C2Q9NQQ7 365 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 VPS51Q9UID3 782 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 C16orf96A6NNT2 1141 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 FAM220BPB1ANY3 271 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 TRIM66O15016 1216 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 SLC16A3O15427 465 aaKnown RBP8.57□□□□□ -1.04
SCN9A-203ENST00000409672 ADCY4Q8NFM4 1077 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 IGDCC4Q8TDY8 1250 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 RANBP17Q9H2T7 1088 aaKnown RBP8.57□□□□□ -1.04
SCN9A-203ENST00000409672 AHSPQ9NZD4 102 aa8.57□□□□□ -1.04
SCN9A-203ENST00000409672 DUSP12Q9UNI6 340 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms