RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 PIM3Q86V86 326 aa4.63□□□□□ -1.67
PMS1-203ENST00000409593 SLC44A5Q8NCS7 719 aa4.63□□□□□ -1.67
PMS1-203ENST00000409593 OR1N1Q8NGS0 311 aa4.63□□□□□ -1.67
PMS1-203ENST00000409593 POF1BQ8WVV4 589 aa4.63□□□□□ -1.67
PMS1-203ENST00000409593 RTKNQ9BST9 563 aa4.63□□□□□ -1.67
PMS1-203ENST00000409593 SFXN1Q9H9B4 322 aa4.63□□□□□ -1.67
PMS1-203ENST00000409593 MSRB1Q9NZV6 116 aa4.63□□□□□ -1.67
PMS1-203ENST00000409593 UTS2RQ9UKP6 389 aa4.63□□□□□ -1.67
PMS1-203ENST00000409593 TRBV5-3A0A0A0MS03 114 aa4.62□□□□□ -1.67
PMS1-203ENST00000409593 A0A1W2PPC1 479 aa4.62□□□□□ -1.67
PMS1-203ENST00000409593 SLC38A8A6NNN8 435 aa4.62□□□□□ -1.67
PMS1-203ENST00000409593 SYT5O00445 386 aa4.62□□□□□ -1.67
PMS1-203ENST00000409593 TULP3O75386 442 aa4.62□□□□□ -1.67
PMS1-203ENST00000409593 LARGE1O95461 756 aa4.62□□□□□ -1.67
PMS1-203ENST00000409593 SGPL1O95470 568 aa4.62□□□□□ -1.67
PMS1-203ENST00000409593 RBM6P78332 1123 aaKnown RBP4.62□□□□□ -1.67
PMS1-203ENST00000409593 GALNT1Q10472 559 aaPredicted RBP4.62□□□□□ -1.67
PMS1-203ENST00000409593 RPS6KA2Q15349 733 aa4.62□□□□□ -1.67
PMS1-203ENST00000409593 TMEM88Q6PEY1 159 aa4.62□□□□□ -1.67
PMS1-203ENST00000409593 B4GALNT4Q76KP1 1039 aa4.62□□□□□ -1.67
PMS1-203ENST00000409593 OR52N4Q8NGI2 321 aa4.62□□□□□ -1.67
PMS1-203ENST00000409593 MPLKIPQ8TAP9 179 aa4.62□□□□□ -1.67
PMS1-203ENST00000409593 NLRP4Q96MN2 994 aa4.62□□□□□ -1.67
PMS1-203ENST00000409593 LIN7CQ9NUP9 197 aaKnown RBP4.62□□□□□ -1.67
PMS1-203ENST00000409593 AGO2Q9UKV8 859 aaKnown RBP4.62□□□□□ -1.67
PMS1-203ENST00000409593 ZNF335Q9H4Z2 1342 aaPredicted RBP4.61□□□□□ -1.67
PMS1-203ENST00000409593 RHODO00212 210 aa4.61□□□□□ -1.67
PMS1-203ENST00000409593 ACKR2O00590 384 aa4.61□□□□□ -1.67
PMS1-203ENST00000409593 ACTL6BO94805 426 aa4.61□□□□□ -1.67
PMS1-203ENST00000409593 SYF2O95926 243 aaKnown RBP4.61□□□□□ -1.67
PMS1-203ENST00000409593 FOXL2P58012 376 aa4.61□□□□□ -1.67
PMS1-203ENST00000409593 DLGAP5Q15398 846 aa4.61□□□□□ -1.67
PMS1-203ENST00000409593 SMTNL2Q2TAL5 461 aa4.61□□□□□ -1.67
PMS1-203ENST00000409593 ARL13AQ5H913 290 aaPredicted RBP4.61□□□□□ -1.67
PMS1-203ENST00000409593 MANEAQ5SRI9 462 aa4.61□□□□□ -1.67
PMS1-203ENST00000409593 CYB5R4Q7L1T6 521 aa4.61□□□□□ -1.67
PMS1-203ENST00000409593 DDIASQ8IXT1 998 aa4.61□□□□□ -1.67
PMS1-203ENST00000409593 MMP21Q8N119 569 aa4.61□□□□□ -1.67
PMS1-203ENST00000409593 CLEC4CQ8WTT0 213 aa4.61□□□□□ -1.67
PMS1-203ENST00000409593 EME1Q96AY2 570 aa4.61□□□□□ -1.67
PMS1-203ENST00000409593 ADAD1Q96M93 576 aaKnown RBP4.61□□□□□ -1.67
PMS1-203ENST00000409593 RMDN3Q96TC7 470 aa4.61□□□□□ -1.67
PMS1-203ENST00000409593 SORBS1Q9BX66 1292 aaKnown RBP4.61□□□□□ -1.67
PMS1-203ENST00000409593 ELAC1Q9H777 363 aaKnown RBP4.61□□□□□ -1.67
PMS1-203ENST00000409593 SEPSECSQ9HD40 501 aaKnown RBP4.61□□□□□ -1.67
PMS1-203ENST00000409593 THSD1Q9NS62 852 aa4.61□□□□□ -1.67
PMS1-203ENST00000409593 DACT1Q9NYF0 836 aa4.61□□□□□ -1.67
PMS1-203ENST00000409593 TAGLN3Q9UI15 199 aa4.61□□□□□ -1.67
PMS1-203ENST00000409593 HERC5Q9UII4 1024 aaKnown RBP4.61□□□□□ -1.67
PMS1-203ENST00000409593 COPG1Q9Y678 874 aaKnown RBP4.61□□□□□ -1.67
PMS1-203ENST00000409593 FAM90A18PA6NE21 464 aa4.61□□□□□ -1.67
PMS1-203ENST00000409593 FAM90A16PA6NEW6 464 aa4.61□□□□□ -1.67
PMS1-203ENST00000409593 AGAP5A6NIR3 686 aa4.61□□□□□ -1.67
PMS1-203ENST00000409593 FAM90A9PA6NNJ1 464 aa4.61□□□□□ -1.67
PMS1-203ENST00000409593 FAM90A5PA8MXJ8 464 aa4.61□□□□□ -1.67
PMS1-203ENST00000409593 ZC3H11AO75152 810 aaKnown RBP eCLIP4.61□□□□□ -1.67
PMS1-203ENST00000409593 NDUFB8O95169 186 aa4.61□□□□□ -1.67
PMS1-203ENST00000409593 FAM90A15PP0C7V4 464 aa4.61□□□□□ -1.67
PMS1-203ENST00000409593 FAM90A14PP0C7W9 464 aa4.61□□□□□ -1.67
PMS1-203ENST00000409593 IGFBP2P18065 325 aa4.61□□□□□ -1.67
PMS1-203ENST00000409593 GAD2Q05329 585 aa4.61□□□□□ -1.67
PMS1-203ENST00000409593 TRIM14Q14142 442 aa4.61□□□□□ -1.67
PMS1-203ENST00000409593 INPP5JQ15735 1006 aaPredicted RBP4.61□□□□□ -1.67
PMS1-203ENST00000409593 LIN54Q6MZP7 749 aa4.61□□□□□ -1.67
PMS1-203ENST00000409593 NFRKBQ6P4R8 1299 aa4.61□□□□□ -1.67
PMS1-203ENST00000409593 RAB11FIP2Q7L804 512 aa4.61□□□□□ -1.67
PMS1-203ENST00000409593 CCDC117Q8IWD4 279 aaPredicted RBP4.61□□□□□ -1.67
PMS1-203ENST00000409593 SPICE1Q8N0Z3 855 aa4.61□□□□□ -1.67
PMS1-203ENST00000409593 SLC25A28Q96A46 364 aa4.61□□□□□ -1.67
PMS1-203ENST00000409593 SEMA4BQ9NPR2 832 aaPredicted RBP4.61□□□□□ -1.67
PMS1-203ENST00000409593 ZBTB40Q9NUA8 1239 aa4.61□□□□□ -1.67
PMS1-203ENST00000409593 DECR2Q9NUI1 292 aa4.61□□□□□ -1.67
PMS1-203ENST00000409593 ANAPC4Q9UJX5 808 aa4.61□□□□□ -1.67
PMS1-203ENST00000409593 LMTK3Q96Q04 1460 aa4.6□□□□□ -1.67
PMS1-203ENST00000409593 KIR2DS5A0A0G2JLQ3 304 aa4.6□□□□□ -1.67
PMS1-203ENST00000409593 IGLV5-39A0A0G2JS06 123 aa4.6□□□□□ -1.67
PMS1-203ENST00000409593 TMEM272A0A1B0GTI8 110 aa4.6□□□□□ -1.67
PMS1-203ENST00000409593 CXorf65A6NEN9 183 aa4.6□□□□□ -1.67
PMS1-203ENST00000409593 EFCAB8A8MWE9 144 aa4.6□□□□□ -1.67
PMS1-203ENST00000409593 B4DGG1 531 aa4.6□□□□□ -1.67
PMS1-203ENST00000409593 ZNF814B7Z6K7 855 aa4.6□□□□□ -1.67
PMS1-203ENST00000409593 KIR2DS3K7RE56 304 aa4.6□□□□□ -1.67
PMS1-203ENST00000409593 PRPF4O43172 522 aaKnown RBP eCLIP4.6□□□□□ -1.67
PMS1-203ENST00000409593 TLX3O43711 291 aaPredicted RBP4.6□□□□□ -1.67
PMS1-203ENST00000409593 CYP3A4P08684 503 aa4.6□□□□□ -1.67
PMS1-203ENST00000409593 SERPINF1P36955 418 aa4.6□□□□□ -1.67
PMS1-203ENST00000409593 ALDH7A1P49419 539 aaKnown RBP4.6□□□□□ -1.67
PMS1-203ENST00000409593 AP2B1P63010 937 aa4.6□□□□□ -1.67
PMS1-203ENST00000409593 CHAF1AQ13111 956 aaPredicted RBP4.6□□□□□ -1.67
PMS1-203ENST00000409593 BLMHQ13867 455 aa4.6□□□□□ -1.67
PMS1-203ENST00000409593 GALNT3Q14435 633 aa4.6□□□□□ -1.67
PMS1-203ENST00000409593 PRTGQ2VWP7 1150 aa4.6□□□□□ -1.67
PMS1-203ENST00000409593 TRIM60Q495X7 471 aa4.6□□□□□ -1.67
PMS1-203ENST00000409593 KIAA1755Q5JYT7 1200 aa4.6□□□□□ -1.67
PMS1-203ENST00000409593 C6orf10Q5SRN2 563 aa4.6□□□□□ -1.67
PMS1-203ENST00000409593 SULT6B1Q6IMI4 303 aa4.6□□□□□ -1.67
PMS1-203ENST00000409593 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.6□□□□□ -1.67
PMS1-203ENST00000409593 RFX8Q6ZV50 586 aa4.6□□□□□ -1.67
PMS1-203ENST00000409593 SLC44A2Q8IWA5 706 aaPredicted RBP4.6□□□□□ -1.67
PMS1-203ENST00000409593 PAQR4Q8N4S7 273 aaPredicted RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms